RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 C6orf89Q6UWU4 347 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 CES3Q6UWW8 571 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 TMEM207Q6UWW9 146 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 GDPGP1Q6ZNW5 385 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 FAM47EQ6ZV65 393 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 CMC1Q7Z7K0 106 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 COMMD2Q86X83 199 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 VSIG1Q86XK7 387 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 CDKL3Q8IVW4 592 aaPredicted RBP1.28□□□□□ -2.2
CCDC39-203ENST00000473854 LRRC34Q8IZ02 419 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 RCOR2Q8IZ40 523 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 EID3Q8N140 333 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 ZNF567Q8N184 647 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 SIX6OS1Q8N1H7 587 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 TMEM86AQ8N2M4 240 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 RIBC1Q8N443 379 aaPredicted RBP1.28□□□□□ -2.2
CCDC39-203ENST00000473854 RTL3Q8N8U3 475 aaKnown RBP1.28□□□□□ -2.2
CCDC39-203ENST00000473854 CCDC89Q8N998 374 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 ATAD1Q8NBU5 361 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 KCTD6Q8NC69 237 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 OR52K2Q8NGK3 314 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 OR52K1Q8NGK4 314 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 OR13J1Q8NGT2 312 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 GDAP1Q8TB36 358 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 RAET1EQ8TD07 263 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 TRAF3IP1Q8TDR0 691 aaPredicted RBP1.28□□□□□ -2.2
CCDC39-203ENST00000473854 PHLDA1Q8WV24 401 aaPredicted RBP1.28□□□□□ -2.2
CCDC39-203ENST00000473854 C10orf82Q8WW14 230 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 MAIP1Q8WWC4 291 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 CKAP2Q8WWK9 683 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 HTR3CQ8WXA8 447 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 IRGQQ8WZA9 623 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 HDAC11Q96DB2 347 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 FAM120BQ96EK7 910 aaKnown RBP1.28□□□□□ -2.2
CCDC39-203ENST00000473854 PGAP3Q96FM1 320 aaPredicted RBP1.28□□□□□ -2.2
CCDC39-203ENST00000473854 PGM2Q96G03 612 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 CFAP36Q96G28 342 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 ZNF799Q96GE5 643 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 CELF6Q96J87 481 aaKnown RBP1.28□□□□□ -2.2
CCDC39-203ENST00000473854 PKNOX2Q96KN3 472 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 RMDN2Q96LZ7 410 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 C10orf90Q96M02 699 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 TTC25Q96NG3 672 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 CASD1Q96PB1 797 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 DEFB118Q96PH6 123 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 SMIM14Q96QK8 99 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 XPO6Q96QU8 1125 aaKnown RBP1.28□□□□□ -2.2
CCDC39-203ENST00000473854 CCT8L2Q96SF2 557 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 KLF6Q99612 283 aaPredicted RBP1.28□□□□□ -2.2
CCDC39-203ENST00000473854 PRMT1Q99873 361 aaKnown RBP1.28□□□□□ -2.2
CCDC39-203ENST00000473854 TREX2Q9BQ50 279 aaPredicted RBP1.28□□□□□ -2.2
CCDC39-203ENST00000473854 APOL2Q9BQE5 337 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 URM1Q9BTM9 101 aaKnown RBP1.28□□□□□ -2.2
CCDC39-203ENST00000473854 MED10Q9BTT4 135 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 MAK16Q9BXY0 300 aaKnown RBP1.28□□□□□ -2.2
CCDC39-203ENST00000473854 FRMD8P1Q9BZ68 369 aaPredicted RBP1.28□□□□□ -2.2
CCDC39-203ENST00000473854 FAM107BQ9H098 131 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 GBA3Q9H227 469 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 PPIL3Q9H2H8 161 aaKnown RBP1.28□□□□□ -2.2
CCDC39-203ENST00000473854 ARRDC1-AS1Q9H2J1 176 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 SNX25Q9H3E2 840 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 CENPHQ9H3R5 247 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 CWH43Q9H720 699 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 SLCO1B3Q9NPD5 702 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 DMAP1Q9NPF5 467 aaPredicted RBP1.28□□□□□ -2.2
CCDC39-203ENST00000473854 DDIT4Q9NX09 232 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 ARHGEF38Q9NXL2 777 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 WSB2Q9NYS7 404 aaPredicted RBP1.28□□□□□ -2.2
CCDC39-203ENST00000473854 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP1.28□□□□□ -2.2
CCDC39-203ENST00000473854 IL37Q9NZH6 218 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 SEPT10Q9P0V9 454 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 BCCIPQ9P287 314 aaKnown RBP eCLIP1.28□□□□□ -2.2
CCDC39-203ENST00000473854 RCOR3Q9P2K3 495 aaPredicted RBP1.28□□□□□ -2.2
CCDC39-203ENST00000473854 SLC17A7Q9P2U7 560 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 PSMC3IPQ9P2W1 217 aaPredicted RBP1.28□□□□□ -2.2
CCDC39-203ENST00000473854 TBK1Q9UHD2 729 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 ANAPC5Q9UJX4 755 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 TBX21Q9UL17 535 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 EMCNQ9ULC0 261 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 KIAA1257Q9ULG3 409 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 PLAGL1Q9UM63 463 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 PCDHGB4Q9UN71 923 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 GPR34Q9UPC5 381 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 ZNF148Q9UQR1 794 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.28□□□□□ -2.2
CCDC39-203ENST00000473854 RRP15Q9Y3B9 282 aaKnown RBP1.28□□□□□ -2.2
CCDC39-203ENST00000473854 TRIM17Q9Y577 477 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 SEC23IPQ9Y6Y8 1000 aaKnown RBP1.28□□□□□ -2.2
CCDC39-203ENST00000473854 NCOA6Q14686 2063 aaPredicted RBP1.28□□□□□ -2.2
CCDC39-203ENST00000473854 MED13Q9UHV7 2174 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 PCNX1Q96RV3 2341 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 PIEZO2Q9H5I5 2752 aa1.28□□□□□ -2.2
CCDC39-203ENST00000473854 ZNF469Q96JG9 3925 aaPredicted RBP1.28□□□□□ -2.21
CCDC39-203ENST00000473854 ADGRG4Q8IZF6 3080 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 KALRNO60229 2985 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 NBASA2RRP1 2371 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 ACACAQ13085 2346 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 ARID1AO14497 2285 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 SDK2Q58EX2 2172 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 ARHGAP21Q5T5U3 1957 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms