RNA–Protein interactions for RNA: ENST00000472096.1

CALD1-215, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 651 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-215ENST00000472096 YIPF4Q9BSR8 244 aa13.7□□□□□ -0.22
CALD1-215ENST00000472096 UGT2B28Q9BY64 529 aa13.7□□□□□ -0.22
CALD1-215ENST00000472096 RTN4RQ9BZR6 473 aa13.7□□□□□ -0.22
CALD1-215ENST00000472096 WDR55Q9H6Y2 383 aaPredicted RBP13.7□□□□□ -0.22
CALD1-215ENST00000472096 DUSP22Q9NRW4 184 aa13.7□□□□□ -0.22
CALD1-215ENST00000472096 AIG1Q9NVV5 245 aa13.7□□□□□ -0.22
CALD1-215ENST00000472096 GPATCH2Q9NW75 528 aa13.7□□□□□ -0.22
CALD1-215ENST00000472096 COQ3Q9NZJ6 369 aa13.7□□□□□ -0.22
CALD1-215ENST00000472096 DKKL1Q9UK85 242 aa13.7□□□□□ -0.22
CALD1-215ENST00000472096 RNF6Q9Y252 685 aa13.7□□□□□ -0.22
CALD1-215ENST00000472096 INTS1Q8N201 2190 aaKnown RBP13.7□□□□□ -0.22
CALD1-215ENST00000472096 PKDREJQ9NTG1 2253 aa13.7□□□□□ -0.22
CALD1-215ENST00000472096 RNASET2O00584 256 aaKnown RBP13.69□□□□□ -0.22
CALD1-215ENST00000472096 CFLARO15519 480 aa13.69□□□□□ -0.22
CALD1-215ENST00000472096 KCNK2O95069 426 aa13.69□□□□□ -0.22
CALD1-215ENST00000472096 BMP7P18075 431 aa13.69□□□□□ -0.22
CALD1-215ENST00000472096 HTR1EP28566 365 aa13.69□□□□□ -0.22
CALD1-215ENST00000472096 SRD5A2P31213 254 aa13.69□□□□□ -0.22
CALD1-215ENST00000472096 PTGER4P35408 488 aa13.69□□□□□ -0.22
CALD1-215ENST00000472096 KIR3DL1P43629 444 aa13.69□□□□□ -0.22
CALD1-215ENST00000472096 STX5Q13190 355 aa13.69□□□□□ -0.22
CALD1-215ENST00000472096 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.69□□□□□ -0.22
CALD1-215ENST00000472096 ZNF630Q2M218 657 aaPredicted RBP13.69□□□□□ -0.22
CALD1-215ENST00000472096 DPY19L1Q2PZI1 675 aa13.69□□□□□ -0.22
CALD1-215ENST00000472096 SPANXN4Q5MJ08 99 aa13.69□□□□□ -0.22
CALD1-215ENST00000472096 CDC73Q6P1J9 531 aa13.69□□□□□ -0.22
CALD1-215ENST00000472096 FIGNL1Q6PIW4 674 aa13.69□□□□□ -0.22
CALD1-215ENST00000472096 ACAD11Q709F0 780 aa13.69□□□□□ -0.22
CALD1-215ENST00000472096 MAVSQ7Z434 540 aa13.69□□□□□ -0.22
CALD1-215ENST00000472096 IFNEQ86WN2 208 aa13.69□□□□□ -0.22
CALD1-215ENST00000472096 FADS6Q8N9I5 356 aa13.69□□□□□ -0.22
CALD1-215ENST00000472096 OR4K17Q8NGC6 315 aa13.69□□□□□ -0.22
CALD1-215ENST00000472096 OR5AK3PQ8NH89 298 aa13.69□□□□□ -0.22
CALD1-215ENST00000472096 OR14L1PQ8NHC6 308 aa13.69□□□□□ -0.22
CALD1-215ENST00000472096 PIWIL2Q8TC59 973 aaKnown RBP13.69□□□□□ -0.22
CALD1-215ENST00000472096 FAM110BQ8TC76 370 aa13.69□□□□□ -0.22
CALD1-215ENST00000472096 CDS1Q92903 461 aa13.69□□□□□ -0.22
CALD1-215ENST00000472096 MAELQ96JY0 434 aaKnown RBP13.69□□□□□ -0.22
CALD1-215ENST00000472096 TIMP4Q99727 224 aa13.69□□□□□ -0.22
CALD1-215ENST00000472096 TTYH2Q9BSA4 534 aa13.69□□□□□ -0.22
CALD1-215ENST00000472096 ACTRT3Q9BYD9 372 aa13.69□□□□□ -0.22
CALD1-215ENST00000472096 PRDM14Q9GZV8 571 aa13.69□□□□□ -0.22
CALD1-215ENST00000472096 CRYBG3Q68DQ2 2970 aa13.69□□□□□ -0.22
CALD1-215ENST00000472096 MED12LQ86YW9 2145 aa13.69□□□□□ -0.22
CALD1-215ENST00000472096 HMGB1P1B2RPK0 211 aaPredicted RBP13.68□□□□□ -0.22
CALD1-215ENST00000472096 E9PBE3 544 aa13.68□□□□□ -0.22
CALD1-215ENST00000472096 SCN2BO60939 215 aa13.68□□□□□ -0.22
CALD1-215ENST00000472096 ACTL6AO96019 429 aa13.68□□□□□ -0.22
CALD1-215ENST00000472096 NGFRP08138 427 aa13.68□□□□□ -0.22
CALD1-215ENST00000472096 KRT16P08779 473 aa13.68□□□□□ -0.22
CALD1-215ENST00000472096 HOXD4P09016 255 aaPredicted RBP13.68□□□□□ -0.22
CALD1-215ENST00000472096 GLI4P10075 376 aa13.68□□□□□ -0.22
CALD1-215ENST00000472096 GCKP35557 465 aa13.68□□□□□ -0.22
CALD1-215ENST00000472096 CLK3P49761 638 aaKnown RBP13.68□□□□□ -0.22
CALD1-215ENST00000472096 PHC1P78364 1004 aa13.68□□□□□ -0.22
CALD1-215ENST00000472096 POU6F2P78424 691 aaPredicted RBP13.68□□□□□ -0.22
CALD1-215ENST00000472096 PMPCAQ10713 525 aa13.68□□□□□ -0.22
CALD1-215ENST00000472096 ACSF3Q4G176 576 aaPredicted RBP13.68□□□□□ -0.22
CALD1-215ENST00000472096 SPATA19Q7Z5L4 167 aa13.68□□□□□ -0.22
CALD1-215ENST00000472096 ZAR1Q86SH2 424 aa13.68□□□□□ -0.22
CALD1-215ENST00000472096 MARCH3Q86UD3 253 aa13.68□□□□□ -0.22
CALD1-215ENST00000472096 PM20D2Q8IYS1 436 aa13.68□□□□□ -0.22
CALD1-215ENST00000472096 GOLGA6L1Q8N7Z2 621 aa13.68□□□□□ -0.22
CALD1-215ENST00000472096 OR2M3Q8NG83 312 aa13.68□□□□□ -0.22
CALD1-215ENST00000472096 CA5BP1Q8WTZ4 195 aa13.68□□□□□ -0.22
CALD1-215ENST00000472096 ASB5Q8WWX0 329 aa13.68□□□□□ -0.22
CALD1-215ENST00000472096 ABTB1Q969K4 478 aaPredicted RBP13.68□□□□□ -0.22
CALD1-215ENST00000472096 CHMP6Q96FZ7 201 aa13.68□□□□□ -0.22
CALD1-215ENST00000472096 BTBD2Q9BX70 525 aa13.68□□□□□ -0.22
CALD1-215ENST00000472096 TBL1XR1Q9BZK7 514 aa13.68□□□□□ -0.22
CALD1-215ENST00000472096 PIGUQ9H490 435 aa13.68□□□□□ -0.22
CALD1-215ENST00000472096 SDHAF3Q9NRP4 125 aa13.68□□□□□ -0.22
CALD1-215ENST00000472096 GIN1Q9NXP7 522 aa13.68□□□□□ -0.22
CALD1-215ENST00000472096 ALKBH4Q9NXW9 302 aa13.68□□□□□ -0.22
CALD1-215ENST00000472096 TAS2R10Q9NYW0 307 aa13.68□□□□□ -0.22
CALD1-215ENST00000472096 FAF1Q9UNN5 650 aaPredicted RBP13.68□□□□□ -0.22
CALD1-215ENST00000472096 NAV2Q8IVL1 2488 aa13.67□□□□□ -0.22
CALD1-215ENST00000472096 RNF103-CHMP3A0A140T963 221 aa13.67□□□□□ -0.22
CALD1-215ENST00000472096 ZNF195O14628 629 aa13.67□□□□□ -0.22
CALD1-215ENST00000472096 OXSR1O95747 527 aaPredicted RBP13.67□□□□□ -0.22
CALD1-215ENST00000472096 ANGPTL1O95841 491 aa13.67□□□□□ -0.22
CALD1-215ENST00000472096 DPP4P27487 766 aa13.67□□□□□ -0.22
CALD1-215ENST00000472096 CHRNB4P30926 498 aa13.67□□□□□ -0.22
CALD1-215ENST00000472096 LCN1P31025 176 aa13.67□□□□□ -0.22
CALD1-215ENST00000472096 GFRA1P56159 465 aa13.67□□□□□ -0.22
CALD1-215ENST00000472096 DSCR4P56555 118 aaPredicted RBP13.67□□□□□ -0.22
CALD1-215ENST00000472096 NME5P56597 212 aa13.67□□□□□ -0.22
CALD1-215ENST00000472096 UFM1P61960 85 aa13.67□□□□□ -0.22
CALD1-215ENST00000472096 GANABQ14697 944 aaKnown RBP13.67□□□□□ -0.22
CALD1-215ENST00000472096 FAM174BQ3ZCQ3 159 aa13.67□□□□□ -0.22
CALD1-215ENST00000472096 SLC9B1Q4ZJI4 515 aa13.67□□□□□ -0.22
CALD1-215ENST00000472096 CCNJQ5T5M9 372 aa13.67□□□□□ -0.22
CALD1-215ENST00000472096 ANXA8L1Q5VT79 327 aa13.67□□□□□ -0.22
CALD1-215ENST00000472096 APOOLQ6UXV4 268 aa13.67□□□□□ -0.22
CALD1-215ENST00000472096 ANKRD46Q86W74 232 aa13.67□□□□□ -0.22
CALD1-215ENST00000472096 CCDC71Q8IV32 467 aaPredicted RBP13.67□□□□□ -0.22
CALD1-215ENST00000472096 OR4A15Q8NGL6 344 aa13.67□□□□□ -0.22
CALD1-215ENST00000472096 LRRC8CQ8TDW0 803 aa13.67□□□□□ -0.22
CALD1-215ENST00000472096 ADAMTS15Q8TE58 950 aa13.67□□□□□ -0.22
CALD1-215ENST00000472096 WDYHV1Q96HA8 205 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms