RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 MAGEA5P43359 124 aa13.8□□□□□ -0.2
SNX13-205ENST00000471744 ATP12AP54707 1039 aa13.8□□□□□ -0.2
SNX13-205ENST00000471744 GAS1P54826 345 aa13.8□□□□□ -0.2
SNX13-205ENST00000471744 C17orf67Q0P5P2 114 aa13.8□□□□□ -0.2
SNX13-205ENST00000471744 SF3A3Q12874 501 aaKnown RBP eCLIP13.8□□□□□ -0.2
SNX13-205ENST00000471744 FADDQ13158 208 aa13.8□□□□□ -0.2
SNX13-205ENST00000471744 FLYWCH1Q4VC44 716 aa13.8□□□□□ -0.2
SNX13-205ENST00000471744 COQ5Q5HYK3 327 aa13.8□□□□□ -0.2
SNX13-205ENST00000471744 FNDC7Q5VTL7 733 aa13.8□□□□□ -0.2
SNX13-205ENST00000471744 MYO7BQ6PIF6 2116 aa13.8□□□□□ -0.2
SNX13-205ENST00000471744 PLCZ1Q86YW0 608 aa13.8□□□□□ -0.2
SNX13-205ENST00000471744 DPP10Q8N608 796 aa13.8□□□□□ -0.2
SNX13-205ENST00000471744 OR52N2Q8NGI0 321 aa13.8□□□□□ -0.2
SNX13-205ENST00000471744 NMUR2Q9GZQ4 415 aa13.8□□□□□ -0.2
SNX13-205ENST00000471744 ZNF350Q9GZX5 532 aa13.8□□□□□ -0.2
SNX13-205ENST00000471744 FAM107BQ9H098 131 aa13.8□□□□□ -0.2
SNX13-205ENST00000471744 UBQLN3Q9H347 655 aa13.8□□□□□ -0.2
SNX13-205ENST00000471744 SLC6A13Q9NSD5 602 aa13.8□□□□□ -0.2
SNX13-205ENST00000471744 GMEB1Q9Y692 573 aa13.8□□□□□ -0.2
SNX13-205ENST00000471744 KCNE3Q9Y6H6 103 aa13.8□□□□□ -0.2
SNX13-205ENST00000471744 TMEM247A6NEH6 219 aa13.79□□□□□ -0.2
SNX13-205ENST00000471744 H3BNH8 94 aa13.79□□□□□ -0.2
SNX13-205ENST00000471744 CLIC1O00299 241 aa13.79□□□□□ -0.2
SNX13-205ENST00000471744 HMGN4O00479 90 aa13.79□□□□□ -0.2
SNX13-205ENST00000471744 NDUFB5O43674 189 aa13.79□□□□□ -0.2
SNX13-205ENST00000471744 CDC40O60508 579 aaKnown RBP eCLIP13.79□□□□□ -0.2
SNX13-205ENST00000471744 RFPL3SP0C7P2 107 aa13.79□□□□□ -0.2
SNX13-205ENST00000471744 HOXB9P17482 250 aaPredicted RBP13.79□□□□□ -0.2
SNX13-205ENST00000471744 DCTP40126 519 aa13.79□□□□□ -0.2
SNX13-205ENST00000471744 CRATP43155 626 aa13.79□□□□□ -0.2
SNX13-205ENST00000471744 CASP6P55212 293 aa13.79□□□□□ -0.2
SNX13-205ENST00000471744 KLF10Q13118 480 aa13.79□□□□□ -0.2
SNX13-205ENST00000471744 MRPL49Q13405 166 aaKnown RBP13.79□□□□□ -0.2
SNX13-205ENST00000471744 GNA13Q14344 377 aa13.79□□□□□ -0.2
SNX13-205ENST00000471744 PAGE3Q5JUK9 113 aa13.79□□□□□ -0.2
SNX13-205ENST00000471744 AP1ARQ63HQ0 302 aa13.79□□□□□ -0.2
SNX13-205ENST00000471744 MTERF4Q7Z6M4 381 aaKnown RBP13.79□□□□□ -0.2
SNX13-205ENST00000471744 WDSUB1Q8N9V3 476 aa13.79□□□□□ -0.2
SNX13-205ENST00000471744 OR4K17Q8NGC6 315 aa13.79□□□□□ -0.2
SNX13-205ENST00000471744 OR4C3Q8NH37 302 aa13.79□□□□□ -0.2
SNX13-205ENST00000471744 PMM1Q92871 262 aa13.79□□□□□ -0.2
SNX13-205ENST00000471744 RAB8BQ92930 207 aa13.79□□□□□ -0.2
SNX13-205ENST00000471744 ROPN1LQ96C74 230 aa13.79□□□□□ -0.2
SNX13-205ENST00000471744 GNRHR2Q96P88 292 aa13.79□□□□□ -0.2
SNX13-205ENST00000471744 TRNT1Q96Q11 434 aaKnown RBP13.79□□□□□ -0.2
SNX13-205ENST00000471744 DEFB127Q9H1M4 99 aa13.79□□□□□ -0.2
SNX13-205ENST00000471744 LDAHQ9H6V9 325 aa13.79□□□□□ -0.2
SNX13-205ENST00000471744 PTGES2Q9H7Z7 377 aa13.79□□□□□ -0.2
SNX13-205ENST00000471744 CALML5Q9NZT1 146 aa13.79□□□□□ -0.2
SNX13-205ENST00000471744 FLRT3Q9NZU0 649 aa13.79□□□□□ -0.2
SNX13-205ENST00000471744 P2RX2Q9UBL9 471 aa13.79□□□□□ -0.2
SNX13-205ENST00000471744 WDR45Q9Y484 360 aa13.79□□□□□ -0.2
SNX13-205ENST00000471744 IGLV3-32A0A0A0MS00 114 aa13.78□□□□□ -0.2
SNX13-205ENST00000471744 A0A1B0GVC2 190 aa13.78□□□□□ -0.2
SNX13-205ENST00000471744 OR14I1A6ND48 311 aa13.78□□□□□ -0.2
SNX13-205ENST00000471744 EVPLLA8MZ36 301 aa13.78□□□□□ -0.2
SNX13-205ENST00000471744 ANGPTL1O95841 491 aa13.78□□□□□ -0.2
SNX13-205ENST00000471744 HPNP05981 417 aa13.78□□□□□ -0.2
SNX13-205ENST00000471744 ABOP16442 354 aa13.78□□□□□ -0.2
SNX13-205ENST00000471744 MSX1P28360 303 aa13.78□□□□□ -0.2
SNX13-205ENST00000471744 SRD5A2P31213 254 aa13.78□□□□□ -0.2
SNX13-205ENST00000471744 GCKP35557 465 aa13.78□□□□□ -0.2
SNX13-205ENST00000471744 CASP9P55211 416 aa13.78□□□□□ -0.2
SNX13-205ENST00000471744 DSTNP60981 165 aa13.78□□□□□ -0.2
SNX13-205ENST00000471744 STX5Q13190 355 aa13.78□□□□□ -0.2
SNX13-205ENST00000471744 UBAP2LQ14157 1087 aaKnown RBP13.78□□□□□ -0.2
SNX13-205ENST00000471744 GANABQ14697 944 aaKnown RBP13.78□□□□□ -0.2
SNX13-205ENST00000471744 MMEL1Q495T6 779 aa13.78□□□□□ -0.2
SNX13-205ENST00000471744 GTDC1Q4AE62 458 aa13.78□□□□□ -0.2
SNX13-205ENST00000471744 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.78□□□□□ -0.2
SNX13-205ENST00000471744 TRILQ7L0X0 811 aa13.78□□□□□ -0.2
SNX13-205ENST00000471744 ZAR1Q86SH2 424 aa13.78□□□□□ -0.2
SNX13-205ENST00000471744 DHDDSQ86SQ9 333 aa13.78□□□□□ -0.2
SNX13-205ENST00000471744 GALNT10Q86SR1 603 aa13.78□□□□□ -0.2
SNX13-205ENST00000471744 MARCH3Q86UD3 253 aa13.78□□□□□ -0.2
SNX13-205ENST00000471744 PNPT1Q8TCS8 783 aaKnown RBP13.78□□□□□ -0.2
SNX13-205ENST00000471744 SAP130Q9H0E3 1048 aa13.78□□□□□ -0.2
SNX13-205ENST00000471744 EXO5Q9H790 373 aa13.78□□□□□ -0.2
SNX13-205ENST00000471744 FBXO34Q9NWN3 711 aa13.78□□□□□ -0.2
SNX13-205ENST00000471744 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.78□□□□□ -0.2
SNX13-205ENST00000471744 MRPS18CQ9Y3D5 142 aaKnown RBP13.78□□□□□ -0.2
SNX13-205ENST00000471744 HEATR5AQ86XA9 2040 aa13.78□□□□□ -0.2
SNX13-205ENST00000471744 PCNX1Q96RV3 2341 aa13.78□□□□□ -0.2
SNX13-205ENST00000471744 TRBV5-3A0A0A0MS03 114 aa13.77□□□□□ -0.21
SNX13-205ENST00000471744 TRGV5A0A0B4J1U4 118 aa13.77□□□□□ -0.21
SNX13-205ENST00000471744 C2orf72A6NCS6 295 aa13.77□□□□□ -0.21
SNX13-205ENST00000471744 NPIPB9F8W1W9 429 aa13.77□□□□□ -0.21
SNX13-205ENST00000471744 AQP7O14520 342 aa13.77□□□□□ -0.21
SNX13-205ENST00000471744 KIAA0513O60268 411 aa13.77□□□□□ -0.21
SNX13-205ENST00000471744 SLC19A2O60779 497 aa13.77□□□□□ -0.21
SNX13-205ENST00000471744 TRAPPC6AO75865 159 aa13.77□□□□□ -0.21
SNX13-205ENST00000471744 NPPAP01160 153 aa13.77□□□□□ -0.21
SNX13-205ENST00000471744 STSP08842 583 aa13.77□□□□□ -0.21
SNX13-205ENST00000471744 NR2F1P10589 423 aa13.77□□□□□ -0.21
SNX13-205ENST00000471744 BMP2P12643 396 aa13.77□□□□□ -0.21
SNX13-205ENST00000471744 PTGS2P35354 604 aa13.77□□□□□ -0.21
SNX13-205ENST00000471744 UQCRFS1P47985 274 aa13.77□□□□□ -0.21
SNX13-205ENST00000471744 MVDP53602 400 aa13.77□□□□□ -0.21
SNX13-205ENST00000471744 DSCR4P56555 118 aaPredicted RBP13.77□□□□□ -0.21
SNX13-205ENST00000471744 KCNC4Q03721 635 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms