RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 AQP1P29972 269 aa9.06□□□□□ -0.96
SF3A1-207ENST00000471342 ADH7P40394 386 aa9.06□□□□□ -0.96
SF3A1-207ENST00000471342 RNF144AP50876 292 aaPredicted RBP9.06□□□□□ -0.96
SF3A1-207ENST00000471342 PNLIPRP2P54317 469 aa9.06□□□□□ -0.96
SF3A1-207ENST00000471342 TUBA3CQ13748 450 aa9.06□□□□□ -0.96
SF3A1-207ENST00000471342 KPNB1Q14974 876 aaKnown RBP9.06□□□□□ -0.96
SF3A1-207ENST00000471342 NDUFAF6Q330K2 333 aa9.06□□□□□ -0.96
SF3A1-207ENST00000471342 ERICH5Q6P6B1 374 aa9.06□□□□□ -0.96
SF3A1-207ENST00000471342 TUBA3EQ6PEY2 450 aa9.06□□□□□ -0.96
SF3A1-207ENST00000471342 DHRS4L2Q6PKH6 230 aa9.06□□□□□ -0.96
SF3A1-207ENST00000471342 SPPL2CQ8IUH8 684 aa9.06□□□□□ -0.96
SF3A1-207ENST00000471342 COX18Q8N8Q8 333 aa9.06□□□□□ -0.96
SF3A1-207ENST00000471342 C11orf65Q8NCR3 313 aa9.06□□□□□ -0.96
SF3A1-207ENST00000471342 CATSPER1Q8NEC5 780 aa9.06□□□□□ -0.96
SF3A1-207ENST00000471342 OR5L2Q8NGL0 311 aa9.06□□□□□ -0.96
SF3A1-207ENST00000471342 SPPL2AQ8TCT8 520 aa9.06□□□□□ -0.96
SF3A1-207ENST00000471342 FER1L6-AS2Q96M78 137 aa9.06□□□□□ -0.96
SF3A1-207ENST00000471342 KCTD14Q9BQ13 255 aaPredicted RBP9.06□□□□□ -0.96
SF3A1-207ENST00000471342 FUZQ9BT04 418 aa9.06□□□□□ -0.96
SF3A1-207ENST00000471342 PRR14Q9BWN1 585 aa9.06□□□□□ -0.96
SF3A1-207ENST00000471342 HES7Q9BYE0 225 aa9.06□□□□□ -0.96
SF3A1-207ENST00000471342 DEFB126Q9BYW3 111 aa9.06□□□□□ -0.96
SF3A1-207ENST00000471342 MTHFD2LQ9H903 347 aaPredicted RBP9.06□□□□□ -0.96
SF3A1-207ENST00000471342 POLE3Q9NRF9 147 aa9.06□□□□□ -0.96
SF3A1-207ENST00000471342 NDE1Q9NXR1 346 aa9.06□□□□□ -0.96
SF3A1-207ENST00000471342 PLA2G3Q9NZ20 509 aa9.06□□□□□ -0.96
SF3A1-207ENST00000471342 P2RX2Q9UBL9 471 aa9.06□□□□□ -0.96
SF3A1-207ENST00000471342 COPS7AQ9UBW8 275 aa9.06□□□□□ -0.96
SF3A1-207ENST00000471342 CORO2BQ9UQ03 480 aa9.06□□□□□ -0.96
SF3A1-207ENST00000471342 POLHQ9Y253 713 aa9.06□□□□□ -0.96
SF3A1-207ENST00000471342 CFL2Q9Y281 166 aa9.06□□□□□ -0.96
SF3A1-207ENST00000471342 AP3M1Q9Y2T2 418 aa9.06□□□□□ -0.96
SF3A1-207ENST00000471342 YARS2Q9Y2Z4 477 aaKnown RBP9.06□□□□□ -0.96
SF3A1-207ENST00000471342 L3MBTL1Q9Y468 752 aa9.06□□□□□ -0.96
SF3A1-207ENST00000471342 IGLV3-32A0A0A0MS00 114 aa9.05□□□□□ -0.96
SF3A1-207ENST00000471342 A0A1W2PQD3 144 aa9.05□□□□□ -0.96
SF3A1-207ENST00000471342 CDHR4A6H8M9 788 aa9.05□□□□□ -0.96
SF3A1-207ENST00000471342 ETV2O00321 342 aaPredicted RBP9.05□□□□□ -0.96
SF3A1-207ENST00000471342 STX11O75558 287 aa9.05□□□□□ -0.96
SF3A1-207ENST00000471342 NTN1O95631 604 aa9.05□□□□□ -0.96
SF3A1-207ENST00000471342 AK1P00568 194 aa9.05□□□□□ -0.96
SF3A1-207ENST00000471342 PRG2P13727 222 aa9.05□□□□□ -0.96
SF3A1-207ENST00000471342 LCN1P31025 176 aa9.05□□□□□ -0.96
SF3A1-207ENST00000471342 CASP3P42574 277 aa9.05□□□□□ -0.96
SF3A1-207ENST00000471342 MAGEA2P43356 314 aa9.05□□□□□ -0.96
SF3A1-207ENST00000471342 HLCSP50747 726 aa9.05□□□□□ -0.96
SF3A1-207ENST00000471342 ATP12AP54707 1039 aa9.05□□□□□ -0.96
SF3A1-207ENST00000471342 DLX5P56178 289 aa9.05□□□□□ -0.96
SF3A1-207ENST00000471342 SELENOWP63302 87 aa9.05□□□□□ -0.96
SF3A1-207ENST00000471342 ELF3P78545 371 aaPredicted RBP9.05□□□□□ -0.96
SF3A1-207ENST00000471342 SKP2Q13309 424 aa9.05□□□□□ -0.96
SF3A1-207ENST00000471342 FGFBP1Q14512 234 aa9.05□□□□□ -0.96
SF3A1-207ENST00000471342 NRF1Q16656 503 aa9.05□□□□□ -0.96
SF3A1-207ENST00000471342 CBLN3Q6UW01 205 aa9.05□□□□□ -0.96
SF3A1-207ENST00000471342 IGFL3Q6UXB1 125 aa9.05□□□□□ -0.96
SF3A1-207ENST00000471342 ZNF836Q6ZNA1 936 aa9.05□□□□□ -0.96
SF3A1-207ENST00000471342 EIF3MQ7L2H7 374 aaKnown RBP9.05□□□□□ -0.96
SF3A1-207ENST00000471342 SLC29A4Q7RTT9 530 aa9.05□□□□□ -0.96
SF3A1-207ENST00000471342 SZRD1Q7Z422 152 aa9.05□□□□□ -0.96
SF3A1-207ENST00000471342 VTCN1Q7Z7D3 282 aa9.05□□□□□ -0.96
SF3A1-207ENST00000471342 LILRA2Q8N149 483 aa9.05□□□□□ -0.96
SF3A1-207ENST00000471342 ZNF619Q8N2I2 560 aa9.05□□□□□ -0.96
SF3A1-207ENST00000471342 WDSUB1Q8N9V3 476 aa9.05□□□□□ -0.96
SF3A1-207ENST00000471342 CANT1Q8WVQ1 401 aa9.05□□□□□ -0.96
SF3A1-207ENST00000471342 CNOT9Q92600 299 aaKnown RBP9.05□□□□□ -0.96
SF3A1-207ENST00000471342 HAS2Q92819 552 aa9.05□□□□□ -0.96
SF3A1-207ENST00000471342 PMM1Q92871 262 aa9.05□□□□□ -0.96
SF3A1-207ENST00000471342 CCDC124Q96CT7 223 aaKnown RBP9.05□□□□□ -0.96
SF3A1-207ENST00000471342 SPACA9Q96E40 222 aaPredicted RBP9.05□□□□□ -0.96
SF3A1-207ENST00000471342 COL21A1Q96P44 957 aa9.05□□□□□ -0.96
SF3A1-207ENST00000471342 ARHGDIGQ99819 225 aa9.05□□□□□ -0.96
SF3A1-207ENST00000471342 RNF32Q9H0A6 362 aa9.05□□□□□ -0.96
SF3A1-207ENST00000471342 RAD21L1Q9H4I0 556 aa9.05□□□□□ -0.96
SF3A1-207ENST00000471342 NTN4Q9HB63 628 aa9.05□□□□□ -0.96
SF3A1-207ENST00000471342 Q9N2J8 555 aa9.05□□□□□ -0.96
SF3A1-207ENST00000471342 THUMPD1Q9NXG2 353 aaKnown RBP9.05□□□□□ -0.96
SF3A1-207ENST00000471342 DNAJB12Q9NXW2 375 aaKnown RBP9.05□□□□□ -0.96
SF3A1-207ENST00000471342 VNN3Q9NY84 501 aa9.05□□□□□ -0.96
SF3A1-207ENST00000471342 ICAM5Q9UMF0 924 aa9.05□□□□□ -0.96
SF3A1-207ENST00000471342 WDR45Q9Y484 360 aa9.05□□□□□ -0.96
SF3A1-207ENST00000471342 ZNF451Q9Y4E5 1061 aa9.05□□□□□ -0.96
SF3A1-207ENST00000471342 BOD1L1Q8NFC6 3051 aa9.04□□□□□ -0.96
SF3A1-207ENST00000471342 LRRC3CA6NJW4 275 aa9.04□□□□□ -0.96
SF3A1-207ENST00000471342 SLC28A2O43868 658 aa9.04□□□□□ -0.96
SF3A1-207ENST00000471342 EFNA2O43921 213 aa9.04□□□□□ -0.96
SF3A1-207ENST00000471342 ENTPD5O75356 428 aa9.04□□□□□ -0.96
SF3A1-207ENST00000471342 TRIM3O75382 744 aaPredicted RBP9.04□□□□□ -0.96
SF3A1-207ENST00000471342 PRKD3O94806 890 aa9.04□□□□□ -0.96
SF3A1-207ENST00000471342 SOX30O94993 753 aa9.04□□□□□ -0.96
SF3A1-207ENST00000471342 AGR2O95994 175 aa9.04□□□□□ -0.96
SF3A1-207ENST00000471342 F10P00742 488 aa9.04□□□□□ -0.96
SF3A1-207ENST00000471342 SERPINA1P01009 418 aa9.04□□□□□ -0.96
SF3A1-207ENST00000471342 THBS1P07996 1170 aa9.04□□□□□ -0.96
SF3A1-207ENST00000471342 NR2F1P10589 423 aa9.04□□□□□ -0.96
SF3A1-207ENST00000471342 NID1P14543 1247 aa9.04□□□□□ -0.96
SF3A1-207ENST00000471342 HTR2AP28223 471 aa9.04□□□□□ -0.96
SF3A1-207ENST00000471342 PRKAR1BP31321 381 aa9.04□□□□□ -0.96
SF3A1-207ENST00000471342 DCTP40126 519 aa9.04□□□□□ -0.96
SF3A1-207ENST00000471342 ERFP50548 548 aa9.04□□□□□ -0.96
SF3A1-207ENST00000471342 RASSF2P50749 326 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms