RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 URADA6NGE7 173 aa4.38□□□□□ -1.71
CCDC39-202ENST00000471307 EPOPA6NHQ4 379 aa4.38□□□□□ -1.71
CCDC39-202ENST00000471307 ZNF487B1APH4 448 aa4.38□□□□□ -1.71
CCDC39-202ENST00000471307 NPIPB9F8W1W9 429 aa4.38□□□□□ -1.71
CCDC39-202ENST00000471307 SURF4O15260 269 aa4.38□□□□□ -1.71
CCDC39-202ENST00000471307 CCL16O15467 120 aa4.38□□□□□ -1.71
CCDC39-202ENST00000471307 COCHO43405 550 aa4.38□□□□□ -1.71
CCDC39-202ENST00000471307 FMO6PO60774 539 aa4.38□□□□□ -1.71
CCDC39-202ENST00000471307 POP4O95707 220 aaKnown RBP4.38□□□□□ -1.71
CCDC39-202ENST00000471307 PNPP00491 289 aa4.38□□□□□ -1.71
CCDC39-202ENST00000471307 OAS1P00973 400 aaKnown RBP4.38□□□□□ -1.71
CCDC39-202ENST00000471307 HOXD4P09016 255 aaPredicted RBP4.38□□□□□ -1.71
CCDC39-202ENST00000471307 DNAH10OSP0CZ25 163 aa4.38□□□□□ -1.71
CCDC39-202ENST00000471307 HOXB8P17481 243 aaPredicted RBP4.38□□□□□ -1.71
CCDC39-202ENST00000471307 KDELR1P24390 212 aa4.38□□□□□ -1.71
CCDC39-202ENST00000471307 GABRR2P28476 465 aa4.38□□□□□ -1.71
CCDC39-202ENST00000471307 HCAR3P49019 387 aa4.38□□□□□ -1.71
CCDC39-202ENST00000471307 DCDC1P59894 354 aa4.38□□□□□ -1.71
CCDC39-202ENST00000471307 DHODHQ02127 395 aa4.38□□□□□ -1.71
CCDC39-202ENST00000471307 CKAP4Q07065 602 aaKnown RBP4.38□□□□□ -1.71
CCDC39-202ENST00000471307 DPYSL2Q16555 572 aa4.38□□□□□ -1.71
CCDC39-202ENST00000471307 TAZQ16635 292 aa4.38□□□□□ -1.71
CCDC39-202ENST00000471307 CDO1Q16878 200 aa4.38□□□□□ -1.71
CCDC39-202ENST00000471307 TFDP3Q5H9I0 405 aa4.38□□□□□ -1.71
CCDC39-202ENST00000471307 SEL1L2Q5TEA6 688 aa4.38□□□□□ -1.71
CCDC39-202ENST00000471307 CYP4V2Q6ZWL3 525 aaPredicted RBP4.38□□□□□ -1.71
CCDC39-202ENST00000471307 ADGRD2Q7Z7M1 963 aa4.38□□□□□ -1.71
CCDC39-202ENST00000471307 TMEM150AQ86TG1 271 aa4.38□□□□□ -1.71
CCDC39-202ENST00000471307 TAC4Q86UU9 113 aa4.38□□□□□ -1.71
CCDC39-202ENST00000471307 CEP112Q8N8E3 955 aa4.38□□□□□ -1.71
CCDC39-202ENST00000471307 ATP6V0D2Q8N8Y2 350 aa4.38□□□□□ -1.71
CCDC39-202ENST00000471307 Q8NFD4 153 aa4.38□□□□□ -1.71
CCDC39-202ENST00000471307 ACTRT1Q8TDG2 376 aa4.38□□□□□ -1.71
CCDC39-202ENST00000471307 KCNE4Q8WWG9 221 aa4.38□□□□□ -1.71
CCDC39-202ENST00000471307 MRPS31Q92665 395 aaKnown RBP4.38□□□□□ -1.71
CCDC39-202ENST00000471307 KRT35Q92764 455 aa4.38□□□□□ -1.71
CCDC39-202ENST00000471307 RPGRIP1Q96KN7 1286 aa4.38□□□□□ -1.71
CCDC39-202ENST00000471307 FER1L6-AS2Q96M78 137 aa4.38□□□□□ -1.71
CCDC39-202ENST00000471307 PEBP4Q96S96 227 aa4.38□□□□□ -1.71
CCDC39-202ENST00000471307 ATF6BQ99941 703 aa4.38□□□□□ -1.71
CCDC39-202ENST00000471307 NAA11Q9BSU3 229 aaPredicted RBP4.38□□□□□ -1.71
CCDC39-202ENST00000471307 FUT8Q9BYC5 575 aa4.38□□□□□ -1.71
CCDC39-202ENST00000471307 NACA2Q9H009 215 aa4.38□□□□□ -1.71
CCDC39-202ENST00000471307 HOMER3Q9NSC5 361 aa4.38□□□□□ -1.71
CCDC39-202ENST00000471307 PIGVQ9NUD9 493 aa4.38□□□□□ -1.71
CCDC39-202ENST00000471307 RCOR3Q9P2K3 495 aaPredicted RBP4.38□□□□□ -1.71
CCDC39-202ENST00000471307 MYO16Q9Y6X6 1858 aa4.38□□□□□ -1.71
CCDC39-202ENST00000471307 PRRC2BQ5JSZ5 2229 aaKnown RBP4.38□□□□□ -1.71
CCDC39-202ENST00000471307 COL4A4P53420 1690 aaPredicted RBP4.38□□□□□ -1.71
CCDC39-202ENST00000471307 HCFC1P51610 2035 aa4.38□□□□□ -1.71
CCDC39-202ENST00000471307 IGLV3-10A0A075B6K4 115 aa4.37□□□□□ -1.71
CCDC39-202ENST00000471307 SYNJ2BP-COX16A0A087WUM0 186 aa4.37□□□□□ -1.71
CCDC39-202ENST00000471307 TRAV19A0A0A6YYK7 116 aa4.37□□□□□ -1.71
CCDC39-202ENST00000471307 TRBV4-1A0A0J9YWV2 114 aa4.37□□□□□ -1.71
CCDC39-202ENST00000471307 LRRD1A4D1F6 860 aa4.37□□□□□ -1.71
CCDC39-202ENST00000471307 CCDC188H7C350 402 aa4.37□□□□□ -1.71
CCDC39-202ENST00000471307 PGRMC1O00264 195 aaKnown RBP4.37□□□□□ -1.71
CCDC39-202ENST00000471307 SLC1A7O00341 560 aa4.37□□□□□ -1.71
CCDC39-202ENST00000471307 RTCAO00442 366 aaKnown RBP4.37□□□□□ -1.71
CCDC39-202ENST00000471307 TRAFD1O14545 582 aaPredicted RBP4.37□□□□□ -1.71
CCDC39-202ENST00000471307 DIAPH2O60879 1101 aa4.37□□□□□ -1.71
CCDC39-202ENST00000471307 OLFM2O95897 454 aa4.37□□□□□ -1.71
CCDC39-202ENST00000471307 IGLV3-27P01718 113 aa4.37□□□□□ -1.71
CCDC39-202ENST00000471307 APOEP02649 317 aa4.37□□□□□ -1.71
CCDC39-202ENST00000471307 FGGP02679 453 aa4.37□□□□□ -1.71
CCDC39-202ENST00000471307 MBL2P11226 248 aaPredicted RBP4.37□□□□□ -1.71
CCDC39-202ENST00000471307 TCF4P15884 667 aa4.37□□□□□ -1.71
CCDC39-202ENST00000471307 CD27P26842 260 aa4.37□□□□□ -1.71
CCDC39-202ENST00000471307 OXTRP30559 389 aa4.37□□□□□ -1.71
CCDC39-202ENST00000471307 CDKN2BP42772 138 aa4.37□□□□□ -1.71
CCDC39-202ENST00000471307 MARCKSL1P49006 195 aa4.37□□□□□ -1.71
CCDC39-202ENST00000471307 CDH6P55285 790 aa4.37□□□□□ -1.71
CCDC39-202ENST00000471307 BPIFB3P59826 476 aa4.37□□□□□ -1.71
CCDC39-202ENST00000471307 SLC7A9P82251 487 aa4.37□□□□□ -1.71
CCDC39-202ENST00000471307 ARF5P84085 180 aa4.37□□□□□ -1.71
CCDC39-202ENST00000471307 FCHO2Q0JRZ9 810 aa4.37□□□□□ -1.71
CCDC39-202ENST00000471307 TFDP2Q14188 446 aa4.37□□□□□ -1.71
CCDC39-202ENST00000471307 TCEAL5Q5H9L2 206 aa4.37□□□□□ -1.71
CCDC39-202ENST00000471307 LCE3EQ5T5B0 92 aa4.37□□□□□ -1.71
CCDC39-202ENST00000471307 TXNRD3NBQ6F5E7 133 aa4.37□□□□□ -1.71
CCDC39-202ENST00000471307 MFSD7Q6UXD7 560 aa4.37□□□□□ -1.71
CCDC39-202ENST00000471307 LRRC31Q6UY01 552 aa4.37□□□□□ -1.71
CCDC39-202ENST00000471307 BZW1Q7L1Q6 419 aaKnown RBP4.37□□□□□ -1.71
CCDC39-202ENST00000471307 PIWIL3Q7Z3Z3 882 aaKnown RBP4.37□□□□□ -1.71
CCDC39-202ENST00000471307 CENPVQ7Z7K6 275 aaPredicted RBP4.37□□□□□ -1.71
CCDC39-202ENST00000471307 IQCHQ86VS3 1027 aa4.37□□□□□ -1.71
CCDC39-202ENST00000471307 SLC13A5Q86YT5 568 aaPredicted RBP4.37□□□□□ -1.71
CCDC39-202ENST00000471307 CCDC50Q8IVM0 306 aa4.37□□□□□ -1.71
CCDC39-202ENST00000471307 MFN1Q8IWA4 741 aa4.37□□□□□ -1.71
CCDC39-202ENST00000471307 TUSC5Q8IXB3 177 aa4.37□□□□□ -1.71
CCDC39-202ENST00000471307 CCDC185Q8N715 623 aa4.37□□□□□ -1.71
CCDC39-202ENST00000471307 VN1R2Q8NFZ6 395 aa4.37□□□□□ -1.71
CCDC39-202ENST00000471307 RAPGEF5Q92565 580 aa4.37□□□□□ -1.71
CCDC39-202ENST00000471307 PROX1Q92786 737 aa4.37□□□□□ -1.71
CCDC39-202ENST00000471307 ZNF707Q96C28 371 aaPredicted RBP4.37□□□□□ -1.71
CCDC39-202ENST00000471307 FAF2Q96CS3 445 aa4.37□□□□□ -1.71
CCDC39-202ENST00000471307 BTN2A3PQ96KV6 586 aa4.37□□□□□ -1.71
CCDC39-202ENST00000471307 C1orf147Q96MC9 270 aaPredicted RBP4.37□□□□□ -1.71
CCDC39-202ENST00000471307 RNF157Q96PX1 679 aa4.37□□□□□ -1.71
CCDC39-202ENST00000471307 CYP2S1Q96SQ9 504 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms