RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 CEP70Q8NHQ1 597 aa14.71□□□□□ -0.05
COL9A3-208ENST00000469802 LINC01560Q8TB33 94 aa14.71□□□□□ -0.05
COL9A3-208ENST00000469802 FAM110BQ8TC76 370 aa14.71□□□□□ -0.05
COL9A3-208ENST00000469802 GPR151Q8TDV0 419 aa14.71□□□□□ -0.05
COL9A3-208ENST00000469802 DUSP19Q8WTR2 217 aa14.71□□□□□ -0.05
COL9A3-208ENST00000469802 TBL1XR1Q9BZK7 514 aa14.71□□□□□ -0.05
COL9A3-208ENST00000469802 PTGES2Q9H7Z7 377 aa14.71□□□□□ -0.05
COL9A3-208ENST00000469802 SIRT3Q9NTG7 399 aaPredicted RBP14.71□□□□□ -0.05
COL9A3-208ENST00000469802 CCM2LQ9NUG4 571 aaPredicted RBP14.71□□□□□ -0.05
COL9A3-208ENST00000469802 ZNF337Q9Y3M9 751 aa14.71□□□□□ -0.05
COL9A3-208ENST00000469802 MAP1AP78559 2803 aaPredicted RBP14.71□□□□□ -0.05
COL9A3-208ENST00000469802 SETD2Q9BYW2 2564 aaPredicted RBP14.71□□□□□ -0.06
COL9A3-208ENST00000469802 SLC22A20A6NK97 555 aa14.7□□□□□ -0.06
COL9A3-208ENST00000469802 ALG1L2C9J202 215 aa14.7□□□□□ -0.06
COL9A3-208ENST00000469802 H0YC42 278 aa14.7□□□□□ -0.06
COL9A3-208ENST00000469802 MSTNO14793 375 aa14.7□□□□□ -0.06
COL9A3-208ENST00000469802 ANGPTL1O95841 491 aa14.7□□□□□ -0.06
COL9A3-208ENST00000469802 SERPINB5P36952 375 aa14.7□□□□□ -0.06
COL9A3-208ENST00000469802 RFX3P48380 749 aa14.7□□□□□ -0.06
COL9A3-208ENST00000469802 PCYT1AP49585 367 aa14.7□□□□□ -0.06
COL9A3-208ENST00000469802 CLK3P49761 638 aaKnown RBP14.7□□□□□ -0.06
COL9A3-208ENST00000469802 SUCLG1P53597 346 aaKnown RBP14.7□□□□□ -0.06
COL9A3-208ENST00000469802 MANFP55145 182 aaKnown RBP14.7□□□□□ -0.06
COL9A3-208ENST00000469802 TPD52P55327 224 aaPredicted RBP14.7□□□□□ -0.06
COL9A3-208ENST00000469802 C17orf67Q0P5P2 114 aa14.7□□□□□ -0.06
COL9A3-208ENST00000469802 MLC1Q15049 377 aa14.7□□□□□ -0.06
COL9A3-208ENST00000469802 OR2A2Q6IF42 318 aa14.7□□□□□ -0.06
COL9A3-208ENST00000469802 PAMR1Q6UXH9 720 aa14.7□□□□□ -0.06
COL9A3-208ENST00000469802 ZCCHC23Q6ZST2 131 aa14.7□□□□□ -0.06
COL9A3-208ENST00000469802 DDIASQ8IXT1 998 aa14.7□□□□□ -0.06
COL9A3-208ENST00000469802 UBQLNLQ8IYU4 475 aa14.7□□□□□ -0.06
COL9A3-208ENST00000469802 MEIOBQ8N635 442 aa14.7□□□□□ -0.06
COL9A3-208ENST00000469802 SLC16A11Q8NCK7 471 aa14.7□□□□□ -0.06
COL9A3-208ENST00000469802 NUP43Q8NFH3 380 aa14.7□□□□□ -0.06
COL9A3-208ENST00000469802 TCP10LQ8TDR4 215 aa14.7□□□□□ -0.06
COL9A3-208ENST00000469802 PIGQQ9BRB3 760 aa14.7□□□□□ -0.06
COL9A3-208ENST00000469802 EML4Q9HC35 981 aaKnown RBP14.7□□□□□ -0.06
COL9A3-208ENST00000469802 SH3BP4Q9P0V3 963 aa14.7□□□□□ -0.06
COL9A3-208ENST00000469802 GIMAP2Q9UG22 337 aa14.7□□□□□ -0.06
COL9A3-208ENST00000469802 ATP6V1HQ9UI12 483 aa14.7□□□□□ -0.06
COL9A3-208ENST00000469802 NF1P21359 2839 aa14.69□□□□□ -0.06
COL9A3-208ENST00000469802 RAI1Q7Z5J4 1906 aaPredicted RBP14.69□□□□□ -0.06
COL9A3-208ENST00000469802 SCAMP2O15127 329 aaKnown RBP14.69□□□□□ -0.06
COL9A3-208ENST00000469802 EMC8O43402 210 aa14.69□□□□□ -0.06
COL9A3-208ENST00000469802 SPAG7O75391 227 aa14.69□□□□□ -0.06
COL9A3-208ENST00000469802 TNFRSF21O75509 655 aa14.69□□□□□ -0.06
COL9A3-208ENST00000469802 KCNK2O95069 426 aa14.69□□□□□ -0.06
COL9A3-208ENST00000469802 OXSR1O95747 527 aaPredicted RBP14.69□□□□□ -0.06
COL9A3-208ENST00000469802 ZNF17P17021 662 aa14.69□□□□□ -0.06
COL9A3-208ENST00000469802 CPA2P48052 419 aa14.69□□□□□ -0.06
COL9A3-208ENST00000469802 CLDN20P56880 219 aa14.69□□□□□ -0.06
COL9A3-208ENST00000469802 OCRLQ01968 901 aa14.69□□□□□ -0.06
COL9A3-208ENST00000469802 GUSBP1Q15486 140 aa14.69□□□□□ -0.06
COL9A3-208ENST00000469802 DUSP5Q16690 384 aa14.69□□□□□ -0.06
COL9A3-208ENST00000469802 ZCCHC12Q6PEW1 402 aa14.69□□□□□ -0.06
COL9A3-208ENST00000469802 LRIG3Q6UXM1 1119 aa14.69□□□□□ -0.06
COL9A3-208ENST00000469802 R3HCC1LQ7Z5L2 792 aaKnown RBP14.69□□□□□ -0.06
COL9A3-208ENST00000469802 ZAR1Q86SH2 424 aa14.69□□□□□ -0.06
COL9A3-208ENST00000469802 EXOC3L1Q86VI1 746 aa14.69□□□□□ -0.06
COL9A3-208ENST00000469802 METTL25Q8N6Q8 603 aa14.69□□□□□ -0.06
COL9A3-208ENST00000469802 OR5M1Q8NGP8 315 aa14.69□□□□□ -0.06
COL9A3-208ENST00000469802 OR4C3Q8NH37 302 aa14.69□□□□□ -0.06
COL9A3-208ENST00000469802 FBXO30Q8TB52 745 aa14.69□□□□□ -0.06
COL9A3-208ENST00000469802 FIG4Q92562 907 aa14.69□□□□□ -0.06
COL9A3-208ENST00000469802 SLC9A6Q92581 669 aa14.69□□□□□ -0.06
COL9A3-208ENST00000469802 MBD6Q96DN6 1003 aa14.69□□□□□ -0.06
COL9A3-208ENST00000469802 STARD4Q96DR4 205 aa14.69□□□□□ -0.06
COL9A3-208ENST00000469802 FAM120BQ96EK7 910 aaKnown RBP14.69□□□□□ -0.06
COL9A3-208ENST00000469802 PPP3R2Q96LZ3 170 aa14.69□□□□□ -0.06
COL9A3-208ENST00000469802 DACH2Q96NX9 599 aa14.69□□□□□ -0.06
COL9A3-208ENST00000469802 ROPN1BQ9BZX4 212 aaPredicted RBP14.69□□□□□ -0.06
COL9A3-208ENST00000469802 RNF122Q9H9V4 155 aa14.69□□□□□ -0.06
COL9A3-208ENST00000469802 ROPN1Q9HAT0 212 aaPredicted RBP14.69□□□□□ -0.06
COL9A3-208ENST00000469802 PLEKHA6Q9Y2H5 1048 aa14.69□□□□□ -0.06
COL9A3-208ENST00000469802 ZNF175Q9Y473 711 aa14.69□□□□□ -0.06
COL9A3-208ENST00000469802 FLNAP21333 2647 aaKnown RBP14.68□□□□□ -0.06
COL9A3-208ENST00000469802 SH3D21A4FU49 640 aa14.68□□□□□ -0.06
COL9A3-208ENST00000469802 TMEM114B3SHH9 223 aa14.68□□□□□ -0.06
COL9A3-208ENST00000469802 H3BML4 177 aa14.68□□□□□ -0.06
COL9A3-208ENST00000469802 SEC14L5O43304 696 aa14.68□□□□□ -0.06
COL9A3-208ENST00000469802 TYROBPO43914 113 aa14.68□□□□□ -0.06
COL9A3-208ENST00000469802 HRGP04196 525 aa14.68□□□□□ -0.06
COL9A3-208ENST00000469802 CREB1P16220 341 aa14.68□□□□□ -0.06
COL9A3-208ENST00000469802 EFNA1P20827 205 aaPredicted RBP14.68□□□□□ -0.06
COL9A3-208ENST00000469802 TBXA2RP21731 343 aa14.68□□□□□ -0.06
COL9A3-208ENST00000469802 LCN1P31025 176 aa14.68□□□□□ -0.06
COL9A3-208ENST00000469802 HPCAL1P37235 193 aa14.68□□□□□ -0.06
COL9A3-208ENST00000469802 ETV4P43268 484 aa14.68□□□□□ -0.06
COL9A3-208ENST00000469802 KIR2DL2P43627 348 aaPredicted RBP14.68□□□□□ -0.06
COL9A3-208ENST00000469802 DIO3P55073 304 aa14.68□□□□□ -0.06
COL9A3-208ENST00000469802 EEFSECP57772 596 aaKnown RBP14.68□□□□□ -0.06
COL9A3-208ENST00000469802 PTGR1Q14914 329 aa14.68□□□□□ -0.06
COL9A3-208ENST00000469802 VWA1Q6PCB0 445 aa14.68□□□□□ -0.06
COL9A3-208ENST00000469802 EMBQ6PCB8 327 aa14.68□□□□□ -0.06
COL9A3-208ENST00000469802 P4HA3Q7Z4N8 544 aa14.68□□□□□ -0.06
COL9A3-208ENST00000469802 GALNT10Q86SR1 603 aa14.68□□□□□ -0.06
COL9A3-208ENST00000469802 GGNQ86UU5 652 aa14.68□□□□□ -0.06
COL9A3-208ENST00000469802 PSMA8Q8TAA3 256 aa14.68□□□□□ -0.06
COL9A3-208ENST00000469802 CAVIN3Q969G5 261 aa14.68□□□□□ -0.06
COL9A3-208ENST00000469802 ZNF845Q96IR2 970 aaPredicted RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms