RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 ACSL6Q9UKU0 697 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 YARS2Q9Y2Z4 477 aaKnown RBP8.99□□□□□ -0.97
HDAC3-205ENST00000469550 FRYQ5TBA9 3013 aa8.98□□□□□ -0.97
HDAC3-205ENST00000469550 CXorf51AA0A1B0GTR3 108 aa8.98□□□□□ -0.97
HDAC3-205ENST00000469550 C5orf58C9J3I9 102 aa8.98□□□□□ -0.97
HDAC3-205ENST00000469550 SMLR1H3BR10 107 aa8.98□□□□□ -0.97
HDAC3-205ENST00000469550 DKK1O94907 266 aa8.98□□□□□ -0.97
HDAC3-205ENST00000469550 CER1O95813 267 aa8.98□□□□□ -0.97
HDAC3-205ENST00000469550 TALDO1P37837 337 aa8.98□□□□□ -0.97
HDAC3-205ENST00000469550 KCNJ5P48544 419 aa8.98□□□□□ -0.97
HDAC3-205ENST00000469550 AGFG1P52594 562 aaKnown RBP8.98□□□□□ -0.97
HDAC3-205ENST00000469550 SMSP52788 366 aa8.98□□□□□ -0.97
HDAC3-205ENST00000469550 GPR176Q14439 515 aa8.98□□□□□ -0.97
HDAC3-205ENST00000469550 GINS1Q14691 196 aa8.98□□□□□ -0.97
HDAC3-205ENST00000469550 SUZ12Q15022 739 aaKnown RBP8.98□□□□□ -0.97
HDAC3-205ENST00000469550 GRK1Q15835 563 aa8.98□□□□□ -0.97
HDAC3-205ENST00000469550 MINDY4Q4G0A6 757 aa8.98□□□□□ -0.97
HDAC3-205ENST00000469550 ENTPD8Q5MY95 495 aa8.98□□□□□ -0.97
HDAC3-205ENST00000469550 OR2G6Q5TZ20 316 aa8.98□□□□□ -0.97
HDAC3-205ENST00000469550 CD276Q5ZPR3 534 aa8.98□□□□□ -0.97
HDAC3-205ENST00000469550 TMEM215Q68D42 235 aa8.98□□□□□ -0.97
HDAC3-205ENST00000469550 ADNP2Q6IQ32 1131 aa8.98□□□□□ -0.97
HDAC3-205ENST00000469550 HGDQ93099 445 aa8.98□□□□□ -0.97
HDAC3-205ENST00000469550 CIDECQ96AQ7 238 aaPredicted RBP8.98□□□□□ -0.97
HDAC3-205ENST00000469550 OTULINQ96BN8 352 aa8.98□□□□□ -0.97
HDAC3-205ENST00000469550 NEURL3Q96EH8 262 aa8.98□□□□□ -0.97
HDAC3-205ENST00000469550 SCMH1Q96GD3 660 aa8.98□□□□□ -0.97
HDAC3-205ENST00000469550 SENP5Q96HI0 755 aaPredicted RBP8.98□□□□□ -0.97
HDAC3-205ENST00000469550 TM9SF2Q99805 663 aa8.98□□□□□ -0.97
HDAC3-205ENST00000469550 AIFM2Q9BRQ8 373 aa8.98□□□□□ -0.97
HDAC3-205ENST00000469550 GHITMQ9H3K2 345 aa8.98□□□□□ -0.97
HDAC3-205ENST00000469550 HEXA-AS1Q9H8Q6 139 aa8.98□□□□□ -0.97
HDAC3-205ENST00000469550 ZFP64Q9NPA5 681 aa8.98□□□□□ -0.97
HDAC3-205ENST00000469550 CBLCQ9ULV8 474 aa8.98□□□□□ -0.97
HDAC3-205ENST00000469550 CLEC4EQ9ULY5 219 aa8.98□□□□□ -0.97
HDAC3-205ENST00000469550 A0A0A6YYJ9 748 aa8.97□□□□□ -0.97
HDAC3-205ENST00000469550 BTN3A3O00478 584 aa8.97□□□□□ -0.97
HDAC3-205ENST00000469550 BCAT2O15382 392 aaPredicted RBP8.97□□□□□ -0.97
HDAC3-205ENST00000469550 KLHL18O94889 574 aa8.97□□□□□ -0.97
HDAC3-205ENST00000469550 CATP04040 527 aaKnown RBP8.97□□□□□ -0.97
HDAC3-205ENST00000469550 LIMS3P0CW19 117 aa8.97□□□□□ -0.97
HDAC3-205ENST00000469550 LIMS4P0CW20 117 aa8.97□□□□□ -0.97
HDAC3-205ENST00000469550 GSTM3P21266 225 aa8.97□□□□□ -0.97
HDAC3-205ENST00000469550 GKP32189 559 aa8.97□□□□□ -0.97
HDAC3-205ENST00000469550 CDH18Q13634 790 aa8.97□□□□□ -0.97
HDAC3-205ENST00000469550 NFE2L1Q14494 772 aa8.97□□□□□ -0.97
HDAC3-205ENST00000469550 FCN2Q15485 313 aa8.97□□□□□ -0.97
HDAC3-205ENST00000469550 KLHL12Q53G59 568 aa8.97□□□□□ -0.97
HDAC3-205ENST00000469550 MPP7Q5T2T1 576 aa8.97□□□□□ -0.97
HDAC3-205ENST00000469550 ZNF57Q68EA5 555 aaPredicted RBP8.97□□□□□ -0.97
HDAC3-205ENST00000469550 GPR139Q6DWJ6 353 aa8.97□□□□□ -0.97
HDAC3-205ENST00000469550 C1orf94Q6P1W5 598 aa8.97□□□□□ -0.97
HDAC3-205ENST00000469550 ADGRF3Q8IZF5 1079 aa8.97□□□□□ -0.97
HDAC3-205ENST00000469550 ESX1Q8N693 406 aa8.97□□□□□ -0.97
HDAC3-205ENST00000469550 OR2AP1Q8NGE2 309 aa8.97□□□□□ -0.97
HDAC3-205ENST00000469550 OR5AK3PQ8NH89 298 aa8.97□□□□□ -0.97
HDAC3-205ENST00000469550 SLC7A13Q8TCU3 470 aa8.97□□□□□ -0.97
HDAC3-205ENST00000469550 SLC38A5Q8WUX1 472 aa8.97□□□□□ -0.97
HDAC3-205ENST00000469550 GATAD2BQ8WXI9 593 aa8.97□□□□□ -0.97
HDAC3-205ENST00000469550 RNFT2Q96EX2 444 aa8.97□□□□□ -0.97
HDAC3-205ENST00000469550 PPP1R16AQ96I34 528 aa8.97□□□□□ -0.97
HDAC3-205ENST00000469550 GFM1Q96RP9 751 aaKnown RBP8.97□□□□□ -0.97
HDAC3-205ENST00000469550 EFCAB11Q9BUY7 163 aa8.97□□□□□ -0.97
HDAC3-205ENST00000469550 ACAT2Q9BWD1 397 aa8.97□□□□□ -0.97
HDAC3-205ENST00000469550 PPIL3Q9H2H8 161 aaKnown RBP8.97□□□□□ -0.97
HDAC3-205ENST00000469550 CUEDC1Q9NWM3 386 aaPredicted RBP8.97□□□□□ -0.97
HDAC3-205ENST00000469550 PCOLCE2Q9UKZ9 415 aa8.97□□□□□ -0.97
HDAC3-205ENST00000469550 MGAT4AQ9UM21 535 aa8.97□□□□□ -0.97
HDAC3-205ENST00000469550 TP53BP1Q12888 1972 aaPredicted RBP8.97□□□□□ -0.97
HDAC3-205ENST00000469550 AKAP13Q12802 2813 aa8.97□□□□□ -0.97
HDAC3-205ENST00000469550 TUBAL3A6NHL2 446 aa8.97□□□□□ -0.97
HDAC3-205ENST00000469550 A8MX80 341 aa8.97□□□□□ -0.97
HDAC3-205ENST00000469550 KDM4EB2RXH2 506 aaPredicted RBP8.97□□□□□ -0.97
HDAC3-205ENST00000469550 CHST10O43529 356 aa8.97□□□□□ -0.97
HDAC3-205ENST00000469550 TBX19O60806 448 aa8.97□□□□□ -0.97
HDAC3-205ENST00000469550 NME6O75414 186 aaPredicted RBP8.97□□□□□ -0.97
HDAC3-205ENST00000469550 ZNF821O75541 412 aaPredicted RBP8.97□□□□□ -0.97
HDAC3-205ENST00000469550 IFNA7P01567 189 aa8.97□□□□□ -0.97
HDAC3-205ENST00000469550 FTH1P19P0C7X4 201 aa8.97□□□□□ -0.97
HDAC3-205ENST00000469550 ANXA3P12429 323 aa8.97□□□□□ -0.97
HDAC3-205ENST00000469550 STOMP27105 288 aa8.97□□□□□ -0.97
HDAC3-205ENST00000469550 MAOBP27338 520 aa8.97□□□□□ -0.97
HDAC3-205ENST00000469550 IMPA1P29218 277 aa8.97□□□□□ -0.97
HDAC3-205ENST00000469550 PTGS2P35354 604 aa8.97□□□□□ -0.97
HDAC3-205ENST00000469550 AVPR1BP47901 424 aa8.97□□□□□ -0.97
HDAC3-205ENST00000469550 MTNR1AP48039 350 aa8.97□□□□□ -0.97
HDAC3-205ENST00000469550 RFX3P48380 749 aa8.97□□□□□ -0.97
HDAC3-205ENST00000469550 SPINT3P49223 89 aa8.97□□□□□ -0.97
HDAC3-205ENST00000469550 CAV3P56539 151 aa8.97□□□□□ -0.97
HDAC3-205ENST00000469550 MC1RQ01726 317 aa8.97□□□□□ -0.97
HDAC3-205ENST00000469550 TMEM44Q2T9K0 475 aa8.97□□□□□ -0.97
HDAC3-205ENST00000469550 ACSM5Q6NUN0 579 aa8.97□□□□□ -0.97
HDAC3-205ENST00000469550 SERPINA13PQ6UXR4 307 aa8.97□□□□□ -0.97
HDAC3-205ENST00000469550 ABI3BPQ7Z7G0 1075 aa8.97□□□□□ -0.97
HDAC3-205ENST00000469550 APCDD1Q8J025 514 aa8.97□□□□□ -0.97
HDAC3-205ENST00000469550 IQCF1Q8N6M8 205 aa8.97□□□□□ -0.97
HDAC3-205ENST00000469550 LSM14AQ8ND56 463 aaKnown RBP8.97□□□□□ -0.97
HDAC3-205ENST00000469550 LHFPL5Q8TAF8 219 aa8.97□□□□□ -0.97
HDAC3-205ENST00000469550 VOPP1Q96AW1 172 aa8.97□□□□□ -0.97
HDAC3-205ENST00000469550 KCTD12Q96CX2 325 aaKnown RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms