RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 NPIPA5A0A0B4J1W7 369 aa10.91□□□□□ -0.66
VPS13D-204ENST00000469054 BBIP1A8MTZ0 92 aa10.91□□□□□ -0.66
VPS13D-204ENST00000469054 ALG1L2C9J202 215 aa10.91□□□□□ -0.66
VPS13D-204ENST00000469054 NPIPA7E9PJI5 369 aa10.91□□□□□ -0.66
VPS13D-204ENST00000469054 NPIPB9F8W1W9 429 aa10.91□□□□□ -0.66
VPS13D-204ENST00000469054 ADAM10O14672 748 aa10.91□□□□□ -0.66
VPS13D-204ENST00000469054 SCO2O43819 266 aa10.91□□□□□ -0.66
VPS13D-204ENST00000469054 FCMRO60667 390 aa10.91□□□□□ -0.66
VPS13D-204ENST00000469054 CBX6O95503 412 aa10.91□□□□□ -0.66
VPS13D-204ENST00000469054 FAM107AO95990 144 aa10.91□□□□□ -0.66
VPS13D-204ENST00000469054 GUSBP08236 651 aa10.91□□□□□ -0.66
VPS13D-204ENST00000469054 RFPL3SP0C7P2 107 aa10.91□□□□□ -0.66
VPS13D-204ENST00000469054 NPIPA8P0DM63 369 aa10.91□□□□□ -0.66
VPS13D-204ENST00000469054 ETFAP13804 333 aa10.91□□□□□ -0.66
VPS13D-204ENST00000469054 HPGDP15428 266 aa10.91□□□□□ -0.66
VPS13D-204ENST00000469054 PPIBP23284 216 aaKnown RBP10.91□□□□□ -0.66
VPS13D-204ENST00000469054 DCTP40126 519 aa10.91□□□□□ -0.66
VPS13D-204ENST00000469054 MAGEA5P43359 124 aa10.91□□□□□ -0.66
VPS13D-204ENST00000469054 ATP12AP54707 1039 aa10.91□□□□□ -0.66
VPS13D-204ENST00000469054 DSTNP60981 165 aa10.91□□□□□ -0.66
VPS13D-204ENST00000469054 FUT5Q11128 374 aa10.91□□□□□ -0.66
VPS13D-204ENST00000469054 FADDQ13158 208 aa10.91□□□□□ -0.66
VPS13D-204ENST00000469054 STX5Q13190 355 aa10.91□□□□□ -0.66
VPS13D-204ENST00000469054 SLC10A1Q14973 349 aa10.91□□□□□ -0.66
VPS13D-204ENST00000469054 MMEL1Q495T6 779 aa10.91□□□□□ -0.66
VPS13D-204ENST00000469054 FLYWCH1Q4VC44 716 aa10.91□□□□□ -0.66
VPS13D-204ENST00000469054 RUNDC3AQ59EK9 446 aa10.91□□□□□ -0.66
VPS13D-204ENST00000469054 CMPK2Q5EBM0 449 aa10.91□□□□□ -0.66
VPS13D-204ENST00000469054 AP1ARQ63HQ0 302 aa10.91□□□□□ -0.66
VPS13D-204ENST00000469054 APOOLQ6UXV4 268 aa10.91□□□□□ -0.66
VPS13D-204ENST00000469054 DHDDSQ86SQ9 333 aa10.91□□□□□ -0.66
VPS13D-204ENST00000469054 PLCZ1Q86YW0 608 aa10.91□□□□□ -0.66
VPS13D-204ENST00000469054 ANKFN1Q8N957 763 aa10.91□□□□□ -0.66
VPS13D-204ENST00000469054 RP9Q8TA86 221 aaKnown RBP10.91□□□□□ -0.66
VPS13D-204ENST00000469054 ROPN1LQ96C74 230 aa10.91□□□□□ -0.66
VPS13D-204ENST00000469054 TRNT1Q96Q11 434 aaKnown RBP10.91□□□□□ -0.66
VPS13D-204ENST00000469054 CGREF1Q99674 301 aa10.91□□□□□ -0.66
VPS13D-204ENST00000469054 RTN4RQ9BZR6 473 aa10.91□□□□□ -0.66
VPS13D-204ENST00000469054 DEFB127Q9H1M4 99 aa10.91□□□□□ -0.66
VPS13D-204ENST00000469054 ZNF703Q9H7S9 590 aaPredicted RBP10.91□□□□□ -0.66
VPS13D-204ENST00000469054 POLE3Q9NRF9 147 aa10.91□□□□□ -0.66
VPS13D-204ENST00000469054 THUMPD1Q9NXG2 353 aaKnown RBP10.91□□□□□ -0.66
VPS13D-204ENST00000469054 QPCTLQ9NXS2 382 aa10.91□□□□□ -0.66
VPS13D-204ENST00000469054 SEC14L3Q9UDX4 400 aa10.91□□□□□ -0.66
VPS13D-204ENST00000469054 MKLN1Q9UL63 735 aa10.91□□□□□ -0.66
VPS13D-204ENST00000469054 ANKUB1A6NFN9 424 aa10.9□□□□□ -0.66
VPS13D-204ENST00000469054 EVPLLA8MZ36 301 aa10.9□□□□□ -0.66
VPS13D-204ENST00000469054 SCDO00767 359 aa10.9□□□□□ -0.66
VPS13D-204ENST00000469054 MRASO14807 208 aa10.9□□□□□ -0.66
VPS13D-204ENST00000469054 NDUFB5O43674 189 aa10.9□□□□□ -0.66
VPS13D-204ENST00000469054 CBR3O75828 277 aa10.9□□□□□ -0.66
VPS13D-204ENST00000469054 ZIC2O95409 532 aaPredicted RBP10.9□□□□□ -0.66
VPS13D-204ENST00000469054 ANGPTL1O95841 491 aa10.9□□□□□ -0.66
VPS13D-204ENST00000469054 NR2F1P10589 423 aa10.9□□□□□ -0.66
VPS13D-204ENST00000469054 BMP2P12643 396 aa10.9□□□□□ -0.66
VPS13D-204ENST00000469054 GPX2P18283 190 aa10.9□□□□□ -0.66
VPS13D-204ENST00000469054 GDF1P27539 372 aa10.9□□□□□ -0.66
VPS13D-204ENST00000469054 HPCAP84074 193 aa10.9□□□□□ -0.66
VPS13D-204ENST00000469054 C17orf67Q0P5P2 114 aa10.9□□□□□ -0.66
VPS13D-204ENST00000469054 GPR68Q15743 365 aa10.9□□□□□ -0.66
VPS13D-204ENST00000469054 SYPL1Q16563 259 aa10.9□□□□□ -0.66
VPS13D-204ENST00000469054 TRMT5Q32P41 509 aaKnown RBP10.9□□□□□ -0.66
VPS13D-204ENST00000469054 GPAT3Q53EU6 434 aa10.9□□□□□ -0.66
VPS13D-204ENST00000469054 KLHL26Q53HC5 615 aa10.9□□□□□ -0.66
VPS13D-204ENST00000469054 GKAP1Q5VSY0 366 aaPredicted RBP10.9□□□□□ -0.66
VPS13D-204ENST00000469054 REP15Q6BDI9 236 aa10.9□□□□□ -0.66
VPS13D-204ENST00000469054 OR5M10Q6IEU7 315 aa10.9□□□□□ -0.66
VPS13D-204ENST00000469054 TYW3Q6IPR3 259 aaKnown RBP10.9□□□□□ -0.66
VPS13D-204ENST00000469054 GFRALQ6UXV0 394 aa10.9□□□□□ -0.66
VPS13D-204ENST00000469054 LRRC74BQ6ZQY2 392 aa10.9□□□□□ -0.66
VPS13D-204ENST00000469054 OLIG3Q7RTU3 272 aa10.9□□□□□ -0.66
VPS13D-204ENST00000469054 TREML1Q86YW5 311 aa10.9□□□□□ -0.66
VPS13D-204ENST00000469054 GHDCQ8N2G8 530 aa10.9□□□□□ -0.66
VPS13D-204ENST00000469054 POU5F2Q8N7G0 328 aa10.9□□□□□ -0.66
VPS13D-204ENST00000469054 ANKS4BQ8N8V4 417 aa10.9□□□□□ -0.66
VPS13D-204ENST00000469054 ZNF527Q8NB42 609 aa10.9□□□□□ -0.66
VPS13D-204ENST00000469054 PCYOX1LQ8NBM8 494 aa10.9□□□□□ -0.66
VPS13D-204ENST00000469054 DUSP19Q8WTR2 217 aa10.9□□□□□ -0.66
VPS13D-204ENST00000469054 ANKRD27Q96NW4 1050 aa10.9□□□□□ -0.66
VPS13D-204ENST00000469054 SAP130Q9H0E3 1048 aa10.9□□□□□ -0.66
VPS13D-204ENST00000469054 UBQLN3Q9H347 655 aa10.9□□□□□ -0.66
VPS13D-204ENST00000469054 IKZF5Q9H5V7 419 aa10.9□□□□□ -0.66
VPS13D-204ENST00000469054 HHATLQ9HCP6 504 aa10.9□□□□□ -0.66
VPS13D-204ENST00000469054 PLSCR2Q9NRY7 297 aa10.9□□□□□ -0.66
VPS13D-204ENST00000469054 PPP4R1LQ9P1A2 415 aa10.9□□□□□ -0.66
VPS13D-204ENST00000469054 P2RX2Q9UBL9 471 aa10.9□□□□□ -0.66
VPS13D-204ENST00000469054 CORO2BQ9UQ03 480 aa10.9□□□□□ -0.66
VPS13D-204ENST00000469054 C15orf41Q9Y2V0 281 aa10.9□□□□□ -0.66
VPS13D-204ENST00000469054 WDR45Q9Y484 360 aa10.9□□□□□ -0.66
VPS13D-204ENST00000469054 HRH3Q9Y5N1 445 aa10.9□□□□□ -0.66
VPS13D-204ENST00000469054 IGLV3-32A0A0A0MS00 114 aa10.89□□□□□ -0.67
VPS13D-204ENST00000469054 A0A1W2PQD3 144 aa10.89□□□□□ -0.67
VPS13D-204ENST00000469054 C17orf51A8MQB3 221 aa10.89□□□□□ -0.67
VPS13D-204ENST00000469054 J3QKU1 62 aa10.89□□□□□ -0.67
VPS13D-204ENST00000469054 KIAA0513O60268 411 aa10.89□□□□□ -0.67
VPS13D-204ENST00000469054 CDC40O60508 579 aaKnown RBP eCLIP10.89□□□□□ -0.67
VPS13D-204ENST00000469054 TNFRSF21O75509 655 aa10.89□□□□□ -0.67
VPS13D-204ENST00000469054 TRAPPC6AO75865 159 aa10.89□□□□□ -0.67
VPS13D-204ENST00000469054 PDE9AO76083 593 aa10.89□□□□□ -0.67
VPS13D-204ENST00000469054 H6PDO95479 791 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms