RNA–Protein interactions for RNA: ENST00000467574.5

PDCD4-205, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 735 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-205ENST00000467574 TBXA2RP21731 343 aa23.65■■□□□ 1.38
PDCD4-205ENST00000467574 TRPC1P48995 793 aa23.65■■□□□ 1.38
PDCD4-205ENST00000467574 IRX1P78414 480 aaPredicted RBP23.65■■□□□ 1.38
PDCD4-205ENST00000467574 SQLEQ14534 574 aa23.65■■□□□ 1.38
PDCD4-205ENST00000467574 EIPR1Q53HC9 387 aa23.65■■□□□ 1.38
PDCD4-205ENST00000467574 BLOC1S3Q6QNY0 202 aa23.65■■□□□ 1.38
PDCD4-205ENST00000467574 DNAJC14Q6Y2X3 702 aaPredicted RBP23.65■■□□□ 1.38
PDCD4-205ENST00000467574 MARCH3Q86UD3 253 aa23.65■■□□□ 1.38
PDCD4-205ENST00000467574 CHDHQ8NE62 594 aaPredicted RBP23.65■■□□□ 1.38
PDCD4-205ENST00000467574 FAM83FQ8NEG4 500 aaPredicted RBP23.65■■□□□ 1.38
PDCD4-205ENST00000467574 SSC4DQ8WTU2 575 aa23.65■■□□□ 1.38
PDCD4-205ENST00000467574 PHF12Q96QT6 1004 aa23.65■■□□□ 1.38
PDCD4-205ENST00000467574 OR2B2Q9GZK3 357 aa23.65■■□□□ 1.38
PDCD4-205ENST00000467574 LDAHQ9H6V9 325 aa23.65■■□□□ 1.38
PDCD4-205ENST00000467574 NPIPA2E9PIF3 369 aa23.64■■□□□ 1.37
PDCD4-205ENST00000467574 NPIPA3F8WFD2 350 aa23.64■■□□□ 1.37
PDCD4-205ENST00000467574 RFXANKO14593 260 aa23.64■■□□□ 1.37
PDCD4-205ENST00000467574 CBR3O75828 277 aa23.64■■□□□ 1.37
PDCD4-205ENST00000467574 TRAPPC6AO75865 159 aa23.64■■□□□ 1.37
PDCD4-205ENST00000467574 TPOP07202 933 aa23.64■■□□□ 1.37
PDCD4-205ENST00000467574 CHI3L1P36222 383 aaPredicted RBP23.64■■□□□ 1.37
PDCD4-205ENST00000467574 FUT5Q11128 374 aa23.64■■□□□ 1.37
PDCD4-205ENST00000467574 STX5Q13190 355 aa23.64■■□□□ 1.37
PDCD4-205ENST00000467574 HEPHL1Q6MZM0 1159 aa23.64■■□□□ 1.37
PDCD4-205ENST00000467574 TNFAIP8L2Q6P589 184 aaPredicted RBP23.64■■□□□ 1.37
PDCD4-205ENST00000467574 TRIML2Q8N7C3 387 aa23.64■■□□□ 1.37
PDCD4-205ENST00000467574 GTF2H4Q92759 462 aa23.64■■□□□ 1.37
PDCD4-205ENST00000467574 ZNF317Q96PQ6 595 aaPredicted RBP23.64■■□□□ 1.37
PDCD4-205ENST00000467574 TMEM120AQ9BXJ8 343 aa23.64■■□□□ 1.37
PDCD4-205ENST00000467574 TBL1XR1Q9BZK7 514 aa23.64■■□□□ 1.37
PDCD4-205ENST00000467574 TMEM45AQ9NWC5 275 aa23.64■■□□□ 1.37
PDCD4-205ENST00000467574 PPP4R1LQ9P1A2 415 aa23.64■■□□□ 1.37
PDCD4-205ENST00000467574 PCDHGB3Q9Y5G1 929 aa23.64■■□□□ 1.37
PDCD4-205ENST00000467574 ARHGAP21Q5T5U3 1957 aa23.63■■□□□ 1.37
PDCD4-205ENST00000467574 IGLV3-32A0A0A0MS00 114 aa23.63■■□□□ 1.37
PDCD4-205ENST00000467574 DUXAA6NLW8 204 aa23.63■■□□□ 1.37
PDCD4-205ENST00000467574 NPIPB9F8W1W9 429 aa23.63■■□□□ 1.37
PDCD4-205ENST00000467574 PRRG2O14669 202 aa23.63■■□□□ 1.37
PDCD4-205ENST00000467574 VIMP08670 466 aaKnown RBP23.63■■□□□ 1.37
PDCD4-205ENST00000467574 ZCCHC18P0CG32 403 aa23.63■■□□□ 1.37
PDCD4-205ENST00000467574 HOXB9P17482 250 aaPredicted RBP23.63■■□□□ 1.37
PDCD4-205ENST00000467574 CAPN3P20807 821 aa23.63■■□□□ 1.37
PDCD4-205ENST00000467574 CASP6P55212 293 aa23.63■■□□□ 1.37
PDCD4-205ENST00000467574 GTDC1Q4AE62 458 aa23.63■■□□□ 1.37
PDCD4-205ENST00000467574 ZNF621Q6ZSS3 439 aa23.63■■□□□ 1.37
PDCD4-205ENST00000467574 RNF130Q86XS8 419 aa23.63■■□□□ 1.37
PDCD4-205ENST00000467574 OR2M3Q8NG83 312 aa23.63■■□□□ 1.37
PDCD4-205ENST00000467574 ZFP90Q8TF47 636 aa23.63■■□□□ 1.37
PDCD4-205ENST00000467574 ITCHQ96J02 903 aa23.63■■□□□ 1.37
PDCD4-205ENST00000467574 SDF2Q99470 211 aa23.63■■□□□ 1.37
PDCD4-205ENST00000467574 UBQLN4Q9NRR5 601 aa23.63■■□□□ 1.37
PDCD4-205ENST00000467574 CCDC167Q9P0B6 97 aa23.63■■□□□ 1.37
PDCD4-205ENST00000467574 NPIPA5A0A0B4J1W7 369 aa23.62■■□□□ 1.37
PDCD4-205ENST00000467574 NPIPA7E9PJI5 369 aa23.62■■□□□ 1.37
PDCD4-205ENST00000467574 NR5A2O00482 541 aa23.62■■□□□ 1.37
PDCD4-205ENST00000467574 CCL21O00585 134 aa23.62■■□□□ 1.37
PDCD4-205ENST00000467574 DYNC1I1O14576 645 aa23.62■■□□□ 1.37
PDCD4-205ENST00000467574 ANGPTL1O95841 491 aa23.62■■□□□ 1.37
PDCD4-205ENST00000467574 NPIPA8P0DM63 369 aa23.62■■□□□ 1.37
PDCD4-205ENST00000467574 OR12D1P0DN82 309 aa23.62■■□□□ 1.37
PDCD4-205ENST00000467574 TROVE2P10155 538 aaKnown RBP eCLIP23.62■■□□□ 1.37
PDCD4-205ENST00000467574 SRD5A2P31213 254 aa23.62■■□□□ 1.37
PDCD4-205ENST00000467574 KHKP50053 298 aa23.62■■□□□ 1.37
PDCD4-205ENST00000467574 CRYZQ08257 329 aaKnown RBP23.62■■□□□ 1.37
PDCD4-205ENST00000467574 WIPI1Q5MNZ9 446 aaPredicted RBP23.62■■□□□ 1.37
PDCD4-205ENST00000467574 SLC2A7Q6PXP3 512 aa23.62■■□□□ 1.37
PDCD4-205ENST00000467574 C3P1Q6ZMU1 363 aa23.62■■□□□ 1.37
PDCD4-205ENST00000467574 YRDCQ86U90 279 aaKnown RBP23.62■■□□□ 1.37
PDCD4-205ENST00000467574 RAB8BQ92930 207 aa23.62■■□□□ 1.37
PDCD4-205ENST00000467574 SPDL1Q96EA4 605 aa23.62■■□□□ 1.37
PDCD4-205ENST00000467574 CCDC120Q96HB5 630 aa23.62■■□□□ 1.37
PDCD4-205ENST00000467574 RMND5AQ9H871 391 aa23.62■■□□□ 1.37
PDCD4-205ENST00000467574 PNPLA3Q9NST1 481 aa23.62■■□□□ 1.37
PDCD4-205ENST00000467574 MEMO1Q9Y316 297 aa23.62■■□□□ 1.37
PDCD4-205ENST00000467574 SLC6A5Q9Y345 797 aa23.62■■□□□ 1.37
PDCD4-205ENST00000467574 HEATR5AQ86XA9 2040 aa23.62■■□□□ 1.37
PDCD4-205ENST00000467574 PRAMEF27A3QJZ7 478 aa23.61■■□□□ 1.37
PDCD4-205ENST00000467574 HMGN4O00479 90 aa23.61■■□□□ 1.37
PDCD4-205ENST00000467574 BCKDKO14874 412 aa23.61■■□□□ 1.37
PDCD4-205ENST00000467574 AK1P00568 194 aa23.61■■□□□ 1.37
PDCD4-205ENST00000467574 DCTP40126 519 aa23.61■■□□□ 1.37
PDCD4-205ENST00000467574 CLK3P49761 638 aaKnown RBP23.61■■□□□ 1.37
PDCD4-205ENST00000467574 MVDP53602 400 aa23.61■■□□□ 1.37
PDCD4-205ENST00000467574 TOMM20Q15388 145 aa23.61■■□□□ 1.37
PDCD4-205ENST00000467574 ARHGAP11BQ3KRB8 267 aa23.61■■□□□ 1.37
PDCD4-205ENST00000467574 AGKQ53H12 422 aa23.61■■□□□ 1.37
PDCD4-205ENST00000467574 NHSL2Q5HYW2 709 aa23.61■■□□□ 1.37
PDCD4-205ENST00000467574 COX20Q5RI15 118 aa23.61■■□□□ 1.37
PDCD4-205ENST00000467574 DDX59Q5T1V6 619 aaKnown RBP eCLIP23.61■■□□□ 1.37
PDCD4-205ENST00000467574 OLIG3Q7RTU3 272 aa23.61■■□□□ 1.37
PDCD4-205ENST00000467574 OR4K17Q8NGC6 315 aa23.61■■□□□ 1.37
PDCD4-205ENST00000467574 DUSP19Q8WTR2 217 aa23.61■■□□□ 1.37
PDCD4-205ENST00000467574 SARAFQ96BY9 339 aa23.61■■□□□ 1.37
PDCD4-205ENST00000467574 DMRTA2Q96SC8 542 aa23.61■■□□□ 1.37
PDCD4-205ENST00000467574 ZNF350Q9GZX5 532 aa23.61■■□□□ 1.37
PDCD4-205ENST00000467574 PAIP1Q9H074 479 aaKnown RBP23.61■■□□□ 1.37
PDCD4-205ENST00000467574 DSN1Q9H410 356 aa23.61■■□□□ 1.37
PDCD4-205ENST00000467574 EXO5Q9H790 373 aa23.61■■□□□ 1.37
PDCD4-205ENST00000467574 SDHAF3Q9NRP4 125 aa23.61■■□□□ 1.37
PDCD4-205ENST00000467574 MED11Q9P086 117 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms