RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 INPP5EQ9NRR6 644 aa18.46■□□□□ 0.55
SDF4-205ENST00000465727 RABL2AQ9UBK7 228 aaPredicted RBP18.46■□□□□ 0.55
SDF4-205ENST00000465727 RABL2BQ9UNT1 228 aa18.46■□□□□ 0.55
SDF4-205ENST00000465727 A0A0G2JK05 382 aa18.46■□□□□ 0.55
SDF4-205ENST00000465727 SLC9B1P1A6NJY1 282 aa18.46■□□□□ 0.55
SDF4-205ENST00000465727 ZNF593O00488 134 aaPredicted RBP18.46■□□□□ 0.55
SDF4-205ENST00000465727 GSTZ1O43708 216 aaPredicted RBP18.46■□□□□ 0.55
SDF4-205ENST00000465727 TPPPO94811 219 aa18.46■□□□□ 0.55
SDF4-205ENST00000465727 TGM6O95932 706 aa18.46■□□□□ 0.55
SDF4-205ENST00000465727 CHRM4P08173 479 aa18.46■□□□□ 0.55
SDF4-205ENST00000465727 MAP2K6P52564 334 aa18.46■□□□□ 0.55
SDF4-205ENST00000465727 VSX2P58304 361 aaPredicted RBP18.46■□□□□ 0.55
SDF4-205ENST00000465727 DHODHQ02127 395 aa18.46■□□□□ 0.55
SDF4-205ENST00000465727 NHLRC3Q5JS37 347 aa18.46■□□□□ 0.55
SDF4-205ENST00000465727 Q6ZVU0 165 aa18.46■□□□□ 0.55
SDF4-205ENST00000465727 SZRD1Q7Z422 152 aa18.46■□□□□ 0.55
SDF4-205ENST00000465727 NUDT13Q86X67 352 aa18.46■□□□□ 0.55
SDF4-205ENST00000465727 MEX3DQ86XN8 651 aaKnown RBP18.46■□□□□ 0.55
SDF4-205ENST00000465727 HAVCR2Q8TDQ0 301 aa18.46■□□□□ 0.55
SDF4-205ENST00000465727 DIO2Q92813 273 aa18.46■□□□□ 0.55
SDF4-205ENST00000465727 KLHL15Q96M94 604 aa18.46■□□□□ 0.55
SDF4-205ENST00000465727 ARHGDIGQ99819 225 aa18.46■□□□□ 0.55
SDF4-205ENST00000465727 SPRTNQ9H040 489 aaPredicted RBP18.46■□□□□ 0.55
SDF4-205ENST00000465727 LINC00597Q9H2U6 94 aa18.46■□□□□ 0.55
SDF4-205ENST00000465727 ZCCHC3Q9NUD5 404 aaKnown RBP18.46■□□□□ 0.55
SDF4-205ENST00000465727 ABT1Q9ULW3 272 aaKnown RBP18.46■□□□□ 0.55
SDF4-205ENST00000465727 CENPFP49454 3210 aa18.46■□□□□ 0.55
SDF4-205ENST00000465727 A0A1W2PRG6 482 aa18.45■□□□□ 0.54
SDF4-205ENST00000465727 A8MUA0 341 aa18.45■□□□□ 0.54
SDF4-205ENST00000465727 G3V3Q6 166 aa18.45■□□□□ 0.54
SDF4-205ENST00000465727 PLPP2O43688 288 aa18.45■□□□□ 0.54
SDF4-205ENST00000465727 PEX14O75381 377 aa18.45■□□□□ 0.54
SDF4-205ENST00000465727 PPM1BO75688 479 aa18.45■□□□□ 0.54
SDF4-205ENST00000465727 TBX6O95947 436 aaPredicted RBP18.45■□□□□ 0.54
SDF4-205ENST00000465727 SERPIND1P05546 499 aa18.45■□□□□ 0.54
SDF4-205ENST00000465727 TAS2R43P59537 309 aa18.45■□□□□ 0.54
SDF4-205ENST00000465727 ZP1P60852 638 aa18.45■□□□□ 0.54
SDF4-205ENST00000465727 RPS7P62081 194 aaKnown RBP18.45■□□□□ 0.54
SDF4-205ENST00000465727 CRYZQ08257 329 aaKnown RBP18.45■□□□□ 0.54
SDF4-205ENST00000465727 DECR1Q16698 335 aa18.45■□□□□ 0.54
SDF4-205ENST00000465727 ZNF620Q6ZNG0 422 aa18.45■□□□□ 0.54
SDF4-205ENST00000465727 ZNF687Q8N1G0 1237 aa18.45■□□□□ 0.54
SDF4-205ENST00000465727 BBS1Q8NFJ9 593 aa18.45■□□□□ 0.54
SDF4-205ENST00000465727 OR5W2Q8NH69 310 aa18.45■□□□□ 0.54
SDF4-205ENST00000465727 ACOT11Q8WXI4 607 aaPredicted RBP18.45■□□□□ 0.54
SDF4-205ENST00000465727 HMX1Q9NP08 348 aaPredicted RBP18.45■□□□□ 0.54
SDF4-205ENST00000465727 HCN3Q9P1Z3 774 aa18.45■□□□□ 0.54
SDF4-205ENST00000465727 SLC13A4Q9UKG4 626 aa18.45■□□□□ 0.54
SDF4-205ENST00000465727 MFSD2BA6NFX1 497 aa18.45■□□□□ 0.54
SDF4-205ENST00000465727 KRBOX1C9JBD0 128 aa18.45■□□□□ 0.54
SDF4-205ENST00000465727 RTCAO00442 366 aaKnown RBP18.45■□□□□ 0.54
SDF4-205ENST00000465727 TOR1AO14656 332 aa18.45■□□□□ 0.54
SDF4-205ENST00000465727 CTDSPLO15194 276 aa18.45■□□□□ 0.54
SDF4-205ENST00000465727 HYAL3O43820 417 aaPredicted RBP18.45■□□□□ 0.54
SDF4-205ENST00000465727 CD3GP09693 182 aa18.45■□□□□ 0.54
SDF4-205ENST00000465727 SAGP10523 405 aaPredicted RBP18.45■□□□□ 0.54
SDF4-205ENST00000465727 NUP62P37198 522 aaPredicted RBP18.45■□□□□ 0.54
SDF4-205ENST00000465727 RECQLP46063 649 aaPredicted RBP18.45■□□□□ 0.54
SDF4-205ENST00000465727 CAPZA2P47755 286 aa18.45■□□□□ 0.54
SDF4-205ENST00000465727 MLLT1Q03111 559 aaPredicted RBP18.45■□□□□ 0.54
SDF4-205ENST00000465727 SNTB2Q13425 540 aaKnown RBP18.45■□□□□ 0.54
SDF4-205ENST00000465727 TMEM64Q6YI46 380 aa18.45■□□□□ 0.54
SDF4-205ENST00000465727 CXXC5Q7LFL8 322 aaKnown RBP18.45■□□□□ 0.54
SDF4-205ENST00000465727 PXKQ7Z7A4 578 aa18.45■□□□□ 0.54
SDF4-205ENST00000465727 CFAP206Q8IYR0 622 aa18.45■□□□□ 0.54
SDF4-205ENST00000465727 DTX3Q8N9I9 347 aa18.45■□□□□ 0.54
SDF4-205ENST00000465727 TEX19Q8NA77 164 aa18.45■□□□□ 0.54
SDF4-205ENST00000465727 OR51G2Q8NGK0 314 aa18.45■□□□□ 0.54
SDF4-205ENST00000465727 PCNPQ8WW12 178 aaKnown RBP18.45■□□□□ 0.54
SDF4-205ENST00000465727 C12orf66Q96MD2 445 aa18.45■□□□□ 0.54
SDF4-205ENST00000465727 ABRACLQ9P1F3 81 aa18.45■□□□□ 0.54
SDF4-205ENST00000465727 C5AR2Q9P296 337 aa18.45■□□□□ 0.54
SDF4-205ENST00000465727 CFAP97Q9P2B7 532 aa18.45■□□□□ 0.54
SDF4-205ENST00000465727 ADAM29Q9UKF5 820 aa18.45■□□□□ 0.54
SDF4-205ENST00000465727 RWDD3Q9Y3V2 267 aa18.45■□□□□ 0.54
SDF4-205ENST00000465727 KCNMB2Q9Y691 235 aa18.45■□□□□ 0.54
SDF4-205ENST00000465727 SIRT4Q9Y6E7 314 aaPredicted RBP18.45■□□□□ 0.54
SDF4-205ENST00000465727 A0A1B0GVC2 190 aa18.44■□□□□ 0.54
SDF4-205ENST00000465727 TSPAN11A1L157 253 aa18.44■□□□□ 0.54
SDF4-205ENST00000465727 A6NIN4 97 aa18.44■□□□□ 0.54
SDF4-205ENST00000465727 PGRMC2O15173 223 aa18.44■□□□□ 0.54
SDF4-205ENST00000465727 SYPP08247 313 aa18.44■□□□□ 0.54
SDF4-205ENST00000465727 ALPPL2P10696 532 aa18.44■□□□□ 0.54
SDF4-205ENST00000465727 VEGFBP49765 207 aa18.44■□□□□ 0.54
SDF4-205ENST00000465727 CCR6P51684 374 aa18.44■□□□□ 0.54
SDF4-205ENST00000465727 EPHB3P54753 998 aa18.44■□□□□ 0.54
SDF4-205ENST00000465727 OPCMLQ14982 345 aa18.44■□□□□ 0.54
SDF4-205ENST00000465727 FAM69AQ5T7M9 428 aa18.44■□□□□ 0.54
SDF4-205ENST00000465727 NDUFAF5Q5TEU4 345 aa18.44■□□□□ 0.54
SDF4-205ENST00000465727 NLRC3Q7RTR2 1065 aa18.44■□□□□ 0.54
SDF4-205ENST00000465727 OVCH2Q7RTZ1 564 aa18.44■□□□□ 0.54
SDF4-205ENST00000465727 ADCK2Q7Z695 626 aa18.44■□□□□ 0.54
SDF4-205ENST00000465727 OR2A12Q8NGT7 310 aa18.44■□□□□ 0.54
SDF4-205ENST00000465727 LCORQ96JN0 433 aaPredicted RBP18.44■□□□□ 0.54
SDF4-205ENST00000465727 F2RL3Q96RI0 385 aa18.44■□□□□ 0.54
SDF4-205ENST00000465727 REG4Q9BYZ8 158 aa18.44■□□□□ 0.54
SDF4-205ENST00000465727 ZCCHC2Q9C0B9 1178 aaKnown RBP18.44■□□□□ 0.54
SDF4-205ENST00000465727 SHARPINQ9H0F6 387 aa18.44■□□□□ 0.54
SDF4-205ENST00000465727 FN3KQ9H479 309 aa18.44■□□□□ 0.54
SDF4-205ENST00000465727 METTL17Q9H7H0 456 aaPredicted RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms