RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 FUT5Q11128 374 aa10.62□□□□□ -0.71
CUX1-207ENST00000465461 RCAN2Q14206 197 aa10.62□□□□□ -0.71
CUX1-207ENST00000465461 GPR68Q15743 365 aa10.62□□□□□ -0.71
CUX1-207ENST00000465461 CD226Q15762 336 aa10.62□□□□□ -0.71
CUX1-207ENST00000465461 NDUFAF6Q330K2 333 aa10.62□□□□□ -0.71
CUX1-207ENST00000465461 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.62□□□□□ -0.71
CUX1-207ENST00000465461 BNC2Q6ZN30 1099 aaPredicted RBP10.62□□□□□ -0.71
CUX1-207ENST00000465461 PLCZ1Q86YW0 608 aa10.62□□□□□ -0.71
CUX1-207ENST00000465461 TRIML2Q8N7C3 387 aa10.62□□□□□ -0.71
CUX1-207ENST00000465461 OR5M1Q8NGP8 315 aa10.62□□□□□ -0.71
CUX1-207ENST00000465461 C10orf82Q8WW14 230 aa10.62□□□□□ -0.71
CUX1-207ENST00000465461 STON2Q8WXE9 905 aa10.62□□□□□ -0.71
CUX1-207ENST00000465461 ELAC2Q9BQ52 826 aaKnown RBP10.62□□□□□ -0.71
CUX1-207ENST00000465461 G6PC3Q9BUM1 346 aa10.62□□□□□ -0.71
CUX1-207ENST00000465461 TBL1XR1Q9BZK7 514 aa10.62□□□□□ -0.71
CUX1-207ENST00000465461 FAM107BQ9H098 131 aa10.62□□□□□ -0.71
CUX1-207ENST00000465461 PLSCR2Q9NRY7 297 aa10.62□□□□□ -0.71
CUX1-207ENST00000465461 PNPLA3Q9NST1 481 aa10.62□□□□□ -0.71
CUX1-207ENST00000465461 SLC25A37Q9NYZ2 338 aa10.62□□□□□ -0.71
CUX1-207ENST00000465461 KLHL14Q9P2G3 628 aa10.62□□□□□ -0.71
CUX1-207ENST00000465461 B4GALT7Q9UBV7 327 aa10.62□□□□□ -0.71
CUX1-207ENST00000465461 MKLN1Q9UL63 735 aa10.62□□□□□ -0.71
CUX1-207ENST00000465461 TRIM33Q9UPN9 1127 aa10.62□□□□□ -0.71
CUX1-207ENST00000465461 RPH3AQ9Y2J0 694 aaPredicted RBP10.62□□□□□ -0.71
CUX1-207ENST00000465461 PCDHB14Q9Y5E9 798 aa10.62□□□□□ -0.71
CUX1-207ENST00000465461 PCNX3Q9H6A9 2034 aa10.62□□□□□ -0.71
CUX1-207ENST00000465461 RELNP78509 3460 aa10.61□□□□□ -0.71
CUX1-207ENST00000465461 FASNP49327 2511 aaKnown RBP10.61□□□□□ -0.71
CUX1-207ENST00000465461 ZNF407Q9C0G0 2248 aa10.61□□□□□ -0.71
CUX1-207ENST00000465461 A0A1B0GVC2 190 aa10.61□□□□□ -0.71
CUX1-207ENST00000465461 DUXAA6NLW8 204 aa10.61□□□□□ -0.71
CUX1-207ENST00000465461 CCL21O00585 134 aa10.61□□□□□ -0.71
CUX1-207ENST00000465461 OIP5O43482 229 aa10.61□□□□□ -0.71
CUX1-207ENST00000465461 CBR3O75828 277 aa10.61□□□□□ -0.71
CUX1-207ENST00000465461 AGFG2O95081 481 aa10.61□□□□□ -0.71
CUX1-207ENST00000465461 HPNP05981 417 aa10.61□□□□□ -0.71
CUX1-207ENST00000465461 ETFAP13804 333 aa10.61□□□□□ -0.71
CUX1-207ENST00000465461 HPGDP15428 266 aa10.61□□□□□ -0.71
CUX1-207ENST00000465461 TBXA2RP21731 343 aa10.61□□□□□ -0.71
CUX1-207ENST00000465461 ELAVL4P26378 380 aaKnown RBP10.61□□□□□ -0.71
CUX1-207ENST00000465461 DCTP40126 519 aa10.61□□□□□ -0.71
CUX1-207ENST00000465461 CRATP43155 626 aa10.61□□□□□ -0.71
CUX1-207ENST00000465461 CA7P43166 264 aa10.61□□□□□ -0.71
CUX1-207ENST00000465461 CLK3P49761 638 aaKnown RBP10.61□□□□□ -0.71
CUX1-207ENST00000465461 KHKP50053 298 aa10.61□□□□□ -0.71
CUX1-207ENST00000465461 MVDP53602 400 aa10.61□□□□□ -0.71
CUX1-207ENST00000465461 GNGT1P63211 74 aa10.61□□□□□ -0.71
CUX1-207ENST00000465461 LRRC74AQ0VAA2 488 aa10.61□□□□□ -0.71
CUX1-207ENST00000465461 SYPL1Q16563 259 aa10.61□□□□□ -0.71
CUX1-207ENST00000465461 ARHGAP11BQ3KRB8 267 aa10.61□□□□□ -0.71
CUX1-207ENST00000465461 GXYLT1Q4G148 440 aa10.61□□□□□ -0.71
CUX1-207ENST00000465461 FLYWCH1Q4VC44 716 aa10.61□□□□□ -0.71
CUX1-207ENST00000465461 GPAT3Q53EU6 434 aa10.61□□□□□ -0.71
CUX1-207ENST00000465461 EMC4Q5J8M3 183 aa10.61□□□□□ -0.71
CUX1-207ENST00000465461 HEPHL1Q6MZM0 1159 aa10.61□□□□□ -0.71
CUX1-207ENST00000465461 ARHGAP11AQ6P4F7 1023 aa10.61□□□□□ -0.71
CUX1-207ENST00000465461 MSANTD1Q6ZTZ1 278 aa10.61□□□□□ -0.71
CUX1-207ENST00000465461 C16orf62Q7Z3J2 963 aa10.61□□□□□ -0.71
CUX1-207ENST00000465461 CD163Q86VB7 1156 aa10.61□□□□□ -0.71
CUX1-207ENST00000465461 RETREG3Q86VR2 466 aa10.61□□□□□ -0.71
CUX1-207ENST00000465461 DOLPP1Q86YN1 238 aa10.61□□□□□ -0.71
CUX1-207ENST00000465461 MSRB3Q8IXL7 192 aa10.61□□□□□ -0.71
CUX1-207ENST00000465461 RPRMLQ8N4K4 120 aa10.61□□□□□ -0.71
CUX1-207ENST00000465461 FAM26EQ8N5C1 309 aa10.61□□□□□ -0.71
CUX1-207ENST00000465461 ZNF614Q8N883 585 aa10.61□□□□□ -0.71
CUX1-207ENST00000465461 ANKFN1Q8N957 763 aa10.61□□□□□ -0.71
CUX1-207ENST00000465461 CHDHQ8NE62 594 aaPredicted RBP10.61□□□□□ -0.71
CUX1-207ENST00000465461 FAM83FQ8NEG4 500 aaPredicted RBP10.61□□□□□ -0.71
CUX1-207ENST00000465461 OR2M3Q8NG83 312 aa10.61□□□□□ -0.71
CUX1-207ENST00000465461 OR4K17Q8NGC6 315 aa10.61□□□□□ -0.71
CUX1-207ENST00000465461 OR14L1PQ8NHC6 308 aa10.61□□□□□ -0.71
CUX1-207ENST00000465461 NEIL3Q8TAT5 605 aa10.61□□□□□ -0.71
CUX1-207ENST00000465461 FAM57AQ8TBR7 257 aa10.61□□□□□ -0.71
CUX1-207ENST00000465461 MIPOL1Q8TD10 442 aa10.61□□□□□ -0.71
CUX1-207ENST00000465461 ROPN1LQ96C74 230 aa10.61□□□□□ -0.71
CUX1-207ENST00000465461 ZG16BQ96DA0 208 aa10.61□□□□□ -0.71
CUX1-207ENST00000465461 ARSGQ96EG1 525 aa10.61□□□□□ -0.71
CUX1-207ENST00000465461 SH3YL1Q96HL8 342 aaPredicted RBP10.61□□□□□ -0.71
CUX1-207ENST00000465461 PHF12Q96QT6 1004 aa10.61□□□□□ -0.71
CUX1-207ENST00000465461 TRIM8Q9BZR9 551 aa10.61□□□□□ -0.71
CUX1-207ENST00000465461 QRSL1Q9H0R6 528 aaKnown RBP10.61□□□□□ -0.71
CUX1-207ENST00000465461 TPT1P8Q9HAU6 139 aa10.61□□□□□ -0.71
CUX1-207ENST00000465461 ACKR4Q9NPB9 350 aa10.61□□□□□ -0.71
CUX1-207ENST00000465461 UBQLN4Q9NRR5 601 aa10.61□□□□□ -0.71
CUX1-207ENST00000465461 ALKBH4Q9NXW9 302 aa10.61□□□□□ -0.71
CUX1-207ENST00000465461 KCNE5Q9UJ90 142 aa10.61□□□□□ -0.71
CUX1-207ENST00000465461 ABCG2Q9UNQ0 655 aa10.61□□□□□ -0.71
CUX1-207ENST00000465461 SLC5A6Q9Y289 635 aa10.61□□□□□ -0.71
CUX1-207ENST00000465461 PCDHGB3Q9Y5G1 929 aa10.61□□□□□ -0.71
CUX1-207ENST00000465461 GTF3C1Q12789 2109 aa10.6□□□□□ -0.71
CUX1-207ENST00000465461 C15orf38-AP3S2A0A0A6YYH1 394 aa10.6□□□□□ -0.71
CUX1-207ENST00000465461 A0A1W2PP18 115 aa10.6□□□□□ -0.71
CUX1-207ENST00000465461 SHISA8B8ZZ34 492 aa10.6□□□□□ -0.71
CUX1-207ENST00000465461 ALG1L2C9J202 215 aa10.6□□□□□ -0.71
CUX1-207ENST00000465461 SCDO00767 359 aa10.6□□□□□ -0.71
CUX1-207ENST00000465461 AQP7O14520 342 aa10.6□□□□□ -0.71
CUX1-207ENST00000465461 NDUFB5O43674 189 aa10.6□□□□□ -0.71
CUX1-207ENST00000465461 KRT75O95678 551 aa10.6□□□□□ -0.71
CUX1-207ENST00000465461 NUDT7P0C024 238 aa10.6□□□□□ -0.71
CUX1-207ENST00000465461 ZCCHC18P0CG32 403 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms