RNA–Protein interactions for RNA: ENST00000465238.5

COL7A1-205, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-205ENST00000465238 UGT2B11O75310 529 aa16.19■□□□□ 0.18
COL7A1-205ENST00000465238 GLSO94925 669 aaPredicted RBP16.19■□□□□ 0.18
COL7A1-205ENST00000465238 GSNP06396 782 aa16.19■□□□□ 0.18
COL7A1-205ENST00000465238 MATN1P21941 496 aa16.19■□□□□ 0.18
COL7A1-205ENST00000465238 RFX3P48380 749 aa16.19■□□□□ 0.18
COL7A1-205ENST00000465238 DNASE1L1P49184 302 aa16.19■□□□□ 0.18
COL7A1-205ENST00000465238 TLE4Q04727 773 aa16.19■□□□□ 0.18
COL7A1-205ENST00000465238 RCAN2Q14206 197 aa16.19■□□□□ 0.18
COL7A1-205ENST00000465238 DUSP5Q16690 384 aa16.19■□□□□ 0.18
COL7A1-205ENST00000465238 C6orf10Q5SRN2 563 aa16.19■□□□□ 0.18
COL7A1-205ENST00000465238 CPLX4Q7Z7G2 160 aa16.19■□□□□ 0.18
COL7A1-205ENST00000465238 FUNDC1Q8IVP5 155 aa16.19■□□□□ 0.18
COL7A1-205ENST00000465238 COX18Q8N8Q8 333 aa16.19■□□□□ 0.18
COL7A1-205ENST00000465238 LILRB4Q8NHJ6 448 aa16.19■□□□□ 0.18
COL7A1-205ENST00000465238 HGDQ93099 445 aa16.19■□□□□ 0.18
COL7A1-205ENST00000465238 SPDL1Q96EA4 605 aa16.19■□□□□ 0.18
COL7A1-205ENST00000465238 OTUB1Q96FW1 271 aaPredicted RBP16.19■□□□□ 0.18
COL7A1-205ENST00000465238 RMND5BQ96G75 393 aaPredicted RBP16.19■□□□□ 0.18
COL7A1-205ENST00000465238 STACQ99469 402 aa16.19■□□□□ 0.18
COL7A1-205ENST00000465238 ELAC2Q9BQ52 826 aaKnown RBP16.19■□□□□ 0.18
COL7A1-205ENST00000465238 SLC35A5Q9BS91 424 aa16.19■□□□□ 0.18
COL7A1-205ENST00000465238 FAM107BQ9H098 131 aa16.19■□□□□ 0.18
COL7A1-205ENST00000465238 ZNF385DQ9H6B1 395 aa16.19■□□□□ 0.18
COL7A1-205ENST00000465238 IL1RL2Q9HB29 575 aa16.19■□□□□ 0.18
COL7A1-205ENST00000465238 MCCC2Q9HCC0 563 aa16.19■□□□□ 0.18
COL7A1-205ENST00000465238 DUSP22Q9NRW4 184 aa16.19■□□□□ 0.18
COL7A1-205ENST00000465238 GIN1Q9NXP7 522 aa16.19■□□□□ 0.18
COL7A1-205ENST00000465238 RNF6Q9Y252 685 aa16.19■□□□□ 0.18
COL7A1-205ENST00000465238 A0A0G2JMM0 328 aa16.18■□□□□ 0.18
COL7A1-205ENST00000465238 A0A1W2PPB8 328 aa16.18■□□□□ 0.18
COL7A1-205ENST00000465238 A0A1W2PRS3 328 aa16.18■□□□□ 0.18
COL7A1-205ENST00000465238 ANKRD33BA6NCL7 494 aa16.18■□□□□ 0.18
COL7A1-205ENST00000465238 DUXAA6NLW8 204 aa16.18■□□□□ 0.18
COL7A1-205ENST00000465238 KIR3DP1A8MWS1 328 aa16.18■□□□□ 0.18
COL7A1-205ENST00000465238 NPIPA2E9PIF3 369 aa16.18■□□□□ 0.18
COL7A1-205ENST00000465238 NPIPA3F8WFD2 350 aa16.18■□□□□ 0.18
COL7A1-205ENST00000465238 BCKDKO14874 412 aa16.18■□□□□ 0.18
COL7A1-205ENST00000465238 IL33O95760 270 aa16.18■□□□□ 0.18
COL7A1-205ENST00000465238 IGHG3P01860 377 aa16.18■□□□□ 0.18
COL7A1-205ENST00000465238 CASP3P42574 277 aa16.18■□□□□ 0.18
COL7A1-205ENST00000465238 CDKN2CP42773 168 aa16.18■□□□□ 0.18
COL7A1-205ENST00000465238 TRPC1P48995 793 aa16.18■□□□□ 0.18
COL7A1-205ENST00000465238 POU6F2P78424 691 aaPredicted RBP16.18■□□□□ 0.18
COL7A1-205ENST00000465238 GXYLT1Q4G148 440 aa16.18■□□□□ 0.18
COL7A1-205ENST00000465238 EXOSC6Q5RKV6 272 aaKnown RBP16.18■□□□□ 0.18
COL7A1-205ENST00000465238 DESI1Q6ICB0 168 aa16.18■□□□□ 0.18
COL7A1-205ENST00000465238 ANGPTL8Q6UXH0 198 aa16.18■□□□□ 0.18
COL7A1-205ENST00000465238 FAM109AQ8N4B1 249 aa16.18■□□□□ 0.18
COL7A1-205ENST00000465238 C10orf82Q8WW14 230 aa16.18■□□□□ 0.18
COL7A1-205ENST00000465238 NODALQ96S42 347 aa16.18■□□□□ 0.18
COL7A1-205ENST00000465238 DOHHQ9BU89 302 aa16.18■□□□□ 0.18
COL7A1-205ENST00000465238 BTBD2Q9BX70 525 aa16.18■□□□□ 0.18
COL7A1-205ENST00000465238 ANGPTL4Q9BY76 406 aa16.18■□□□□ 0.18
COL7A1-205ENST00000465238 SERHLQ9NQF3 203 aa16.18■□□□□ 0.18
COL7A1-205ENST00000465238 KLRF1Q9NZS2 232 aa16.18■□□□□ 0.18
COL7A1-205ENST00000465238 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.18■□□□□ 0.18
COL7A1-205ENST00000465238 SNX4O95219 450 aa16.17■□□□□ 0.18
COL7A1-205ENST00000465238 KRT75O95678 551 aa16.17■□□□□ 0.18
COL7A1-205ENST00000465238 CYP4B1P13584 511 aa16.17■□□□□ 0.18
COL7A1-205ENST00000465238 IGFBP2P18065 325 aa16.17■□□□□ 0.18
COL7A1-205ENST00000465238 KRTAP10-9P60411 292 aa16.17■□□□□ 0.18
COL7A1-205ENST00000465238 RPS26P62854 115 aaKnown RBP16.17■□□□□ 0.18
COL7A1-205ENST00000465238 PMPCAQ10713 525 aa16.17■□□□□ 0.18
COL7A1-205ENST00000465238 HYAL4Q2M3T9 481 aa16.17■□□□□ 0.18
COL7A1-205ENST00000465238 SAXO2Q658L1 398 aa16.17■□□□□ 0.18
COL7A1-205ENST00000465238 SLC30A6Q6NXT4 461 aa16.17■□□□□ 0.18
COL7A1-205ENST00000465238 FIGNL1Q6PIW4 674 aa16.17■□□□□ 0.18
COL7A1-205ENST00000465238 SLC2A7Q6PXP3 512 aa16.17■□□□□ 0.18
COL7A1-205ENST00000465238 DNAJC14Q6Y2X3 702 aaPredicted RBP16.17■□□□□ 0.18
COL7A1-205ENST00000465238 SPATA21Q7Z572 469 aa16.17■□□□□ 0.18
COL7A1-205ENST00000465238 PACS2Q86VP3 889 aa16.17■□□□□ 0.18
COL7A1-205ENST00000465238 RPRMLQ8N4K4 120 aa16.17■□□□□ 0.18
COL7A1-205ENST00000465238 TMEM251Q8N6I4 163 aa16.17■□□□□ 0.18
COL7A1-205ENST00000465238 GTF2H4Q92759 462 aa16.17■□□□□ 0.18
COL7A1-205ENST00000465238 CDS1Q92903 461 aa16.17■□□□□ 0.18
COL7A1-205ENST00000465238 NEURL3Q96EH8 262 aa16.17■□□□□ 0.18
COL7A1-205ENST00000465238 JSRP1Q96MG2 331 aaPredicted RBP16.17■□□□□ 0.18
COL7A1-205ENST00000465238 OR7D2Q96RA2 312 aa16.17■□□□□ 0.18
COL7A1-205ENST00000465238 G6PC3Q9BUM1 346 aa16.17■□□□□ 0.18
COL7A1-205ENST00000465238 KCNJ16Q9NPI9 418 aa16.17■□□□□ 0.18
COL7A1-205ENST00000465238 TUBA8Q9NY65 449 aaPredicted RBP16.17■□□□□ 0.18
COL7A1-205ENST00000465238 BOKQ9UMX3 212 aaPredicted RBP16.17■□□□□ 0.18
COL7A1-205ENST00000465238 SPG11Q96JI7 2443 aa16.17■□□□□ 0.18
COL7A1-205ENST00000465238 A0A1B0GVC2 190 aa16.16■□□□□ 0.18
COL7A1-205ENST00000465238 A0A1W2PP18 115 aa16.16■□□□□ 0.18
COL7A1-205ENST00000465238 PRAMEF25A6NGN4 478 aa16.16■□□□□ 0.18
COL7A1-205ENST00000465238 FIGNL2A6NMB9 653 aa16.16■□□□□ 0.18
COL7A1-205ENST00000465238 KCNK2O95069 426 aa16.16■□□□□ 0.18
COL7A1-205ENST00000465238 AGR2O95994 175 aa16.16■□□□□ 0.18
COL7A1-205ENST00000465238 ZCCHC18P0CG32 403 aa16.16■□□□□ 0.18
COL7A1-205ENST00000465238 DRD4P21917 467 aa16.16■□□□□ 0.18
COL7A1-205ENST00000465238 ACVR2AP27037 513 aa16.16■□□□□ 0.18
COL7A1-205ENST00000465238 MAGEA5P43359 124 aa16.16■□□□□ 0.18
COL7A1-205ENST00000465238 MASP1P48740 699 aa16.16■□□□□ 0.18
COL7A1-205ENST00000465238 MAN2A2P49641 1150 aa16.16■□□□□ 0.18
COL7A1-205ENST00000465238 CLK3P49761 638 aaKnown RBP16.16■□□□□ 0.18
COL7A1-205ENST00000465238 ANXA11P50995 505 aaKnown RBP16.16■□□□□ 0.18
COL7A1-205ENST00000465238 CASP9P55211 416 aa16.16■□□□□ 0.18
COL7A1-205ENST00000465238 NUP107P57740 925 aa16.16■□□□□ 0.18
COL7A1-205ENST00000465238 FOXO1Q12778 655 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms