RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 FIGNL1Q6PIW4 674 aa15.54■□□□□ 0.08
VPS52-215ENST00000464425 NCCRP1Q6ZVX7 275 aaPredicted RBP15.54■□□□□ 0.08
VPS52-215ENST00000464425 BCAS4Q8TDM0 211 aa15.54■□□□□ 0.08
VPS52-215ENST00000464425 CCDC120Q96HB5 630 aa15.54■□□□□ 0.08
VPS52-215ENST00000464425 INPP5KQ9BT40 448 aa15.54■□□□□ 0.08
VPS52-215ENST00000464425 UBQLN3Q9H347 655 aa15.54■□□□□ 0.08
VPS52-215ENST00000464425 ACKR4Q9NPB9 350 aa15.54■□□□□ 0.08
VPS52-215ENST00000464425 GPATCH2Q9NW75 528 aa15.54■□□□□ 0.08
VPS52-215ENST00000464425 QPCTLQ9NXS2 382 aa15.54■□□□□ 0.08
VPS52-215ENST00000464425 SPRR3Q9UBC9 169 aa15.54■□□□□ 0.08
VPS52-215ENST00000464425 ACAD8Q9UKU7 415 aa15.54■□□□□ 0.08
VPS52-215ENST00000464425 FAF1Q9UNN5 650 aaPredicted RBP15.54■□□□□ 0.08
VPS52-215ENST00000464425 MEMO1Q9Y316 297 aa15.54■□□□□ 0.08
VPS52-215ENST00000464425 NDUFAF1Q9Y375 327 aa15.54■□□□□ 0.08
VPS52-215ENST00000464425 CAPN7Q9Y6W3 813 aa15.54■□□□□ 0.08
VPS52-215ENST00000464425 NCKAP5O14513 1909 aa15.54■□□□□ 0.08
VPS52-215ENST00000464425 USP9YO00507 2555 aaPredicted RBP15.54■□□□□ 0.08
VPS52-215ENST00000464425 SPTBN1Q01082 2364 aaKnown RBP15.54■□□□□ 0.08
VPS52-215ENST00000464425 ICE1Q9Y2F5 2266 aa15.54■□□□□ 0.08
VPS52-215ENST00000464425 AQP7O14520 342 aa15.53■□□□□ 0.08
VPS52-215ENST00000464425 NDUFAB1O14561 156 aa15.53■□□□□ 0.08
VPS52-215ENST00000464425 HCN1O60741 890 aa15.53■□□□□ 0.08
VPS52-215ENST00000464425 KCNK2O95069 426 aa15.53■□□□□ 0.08
VPS52-215ENST00000464425 UTS2O95399 124 aa15.53■□□□□ 0.08
VPS52-215ENST00000464425 ENDOUP21128 410 aaKnown RBP15.53■□□□□ 0.08
VPS52-215ENST00000464425 GAS1P54826 345 aa15.53■□□□□ 0.08
VPS52-215ENST00000464425 EIPR1Q53HC9 387 aa15.53■□□□□ 0.08
VPS52-215ENST00000464425 COQ5Q5HYK3 327 aa15.53■□□□□ 0.08
VPS52-215ENST00000464425 EMC4Q5J8M3 183 aa15.53■□□□□ 0.08
VPS52-215ENST00000464425 EXOSC6Q5RKV6 272 aaKnown RBP15.53■□□□□ 0.08
VPS52-215ENST00000464425 SLC2A7Q6PXP3 512 aa15.53■□□□□ 0.08
VPS52-215ENST00000464425 YRDCQ86U90 279 aaKnown RBP15.53■□□□□ 0.08
VPS52-215ENST00000464425 PLCZ1Q86YW0 608 aa15.53■□□□□ 0.08
VPS52-215ENST00000464425 DPP10Q8N608 796 aa15.53■□□□□ 0.08
VPS52-215ENST00000464425 COX18Q8N8Q8 333 aa15.53■□□□□ 0.08
VPS52-215ENST00000464425 CCDC197Q8NCU1 140 aa15.53■□□□□ 0.08
VPS52-215ENST00000464425 RP9Q8TA86 221 aaKnown RBP15.53■□□□□ 0.08
VPS52-215ENST00000464425 CDS1Q92903 461 aa15.53■□□□□ 0.08
VPS52-215ENST00000464425 LRRC37BQ96QE4 947 aa15.53■□□□□ 0.08
VPS52-215ENST00000464425 ACTRT3Q9BYD9 372 aa15.53■□□□□ 0.08
VPS52-215ENST00000464425 PNPLA3Q9NST1 481 aa15.53■□□□□ 0.08
VPS52-215ENST00000464425 FBXO34Q9NWN3 711 aa15.53■□□□□ 0.08
VPS52-215ENST00000464425 GIN1Q9NXP7 522 aa15.53■□□□□ 0.08
VPS52-215ENST00000464425 ARMCX1Q9P291 453 aa15.53■□□□□ 0.08
VPS52-215ENST00000464425 LEF1Q9UJU2 399 aaPredicted RBP15.53■□□□□ 0.08
VPS52-215ENST00000464425 SLC6A5Q9Y345 797 aa15.53■□□□□ 0.08
VPS52-215ENST00000464425 WIF1Q9Y5W5 379 aa15.53■□□□□ 0.08
VPS52-215ENST00000464425 PCNX1Q96RV3 2341 aa15.52■□□□□ 0.08
VPS52-215ENST00000464425 FREM3P0C091 2139 aa15.52■□□□□ 0.08
VPS52-215ENST00000464425 A0A096LPI6 279 aa15.52■□□□□ 0.08
VPS52-215ENST00000464425 C15orf38-AP3S2A0A0A6YYH1 394 aa15.52■□□□□ 0.08
VPS52-215ENST00000464425 OR14I1A6ND48 311 aa15.52■□□□□ 0.08
VPS52-215ENST00000464425 BBIP1A8MTZ0 92 aa15.52■□□□□ 0.08
VPS52-215ENST00000464425 ANGPT2O15123 496 aa15.52■□□□□ 0.08
VPS52-215ENST00000464425 FADS1O60427 444 aa15.52■□□□□ 0.08
VPS52-215ENST00000464425 HPNP05981 417 aa15.52■□□□□ 0.08
VPS52-215ENST00000464425 CDKN2CP42773 168 aa15.52■□□□□ 0.08
VPS52-215ENST00000464425 CASP9P55211 416 aa15.52■□□□□ 0.08
VPS52-215ENST00000464425 RPS26P62854 115 aaKnown RBP15.52■□□□□ 0.08
VPS52-215ENST00000464425 POU6F2P78424 691 aaPredicted RBP15.52■□□□□ 0.08
VPS52-215ENST00000464425 STX5Q13190 355 aa15.52■□□□□ 0.08
VPS52-215ENST00000464425 CYLC2Q14093 348 aaPredicted RBP15.52■□□□□ 0.08
VPS52-215ENST00000464425 GRAMD1BQ3KR37 738 aa15.52■□□□□ 0.08
VPS52-215ENST00000464425 PAGE3Q5JUK9 113 aa15.52■□□□□ 0.08
VPS52-215ENST00000464425 WIPI1Q5MNZ9 446 aaPredicted RBP15.52■□□□□ 0.08
VPS52-215ENST00000464425 LRIF1Q5T3J3 769 aa15.52■□□□□ 0.08
VPS52-215ENST00000464425 CCNJQ5T5M9 372 aa15.52■□□□□ 0.08
VPS52-215ENST00000464425 CDC73Q6P1J9 531 aa15.52■□□□□ 0.08
VPS52-215ENST00000464425 ZNF585AQ6P3V2 769 aa15.52■□□□□ 0.08
VPS52-215ENST00000464425 ZNF621Q6ZSS3 439 aa15.52■□□□□ 0.08
VPS52-215ENST00000464425 C6orf120Q7Z4R8 191 aa15.52■□□□□ 0.08
VPS52-215ENST00000464425 MARCH3Q86UD3 253 aa15.52■□□□□ 0.08
VPS52-215ENST00000464425 NEIL3Q8TAT5 605 aa15.52■□□□□ 0.08
VPS52-215ENST00000464425 ADAMTS15Q8TE58 950 aa15.52■□□□□ 0.08
VPS52-215ENST00000464425 RNF138Q8WVD3 245 aa15.52■□□□□ 0.08
VPS52-215ENST00000464425 SARAFQ96BY9 339 aa15.52■□□□□ 0.08
VPS52-215ENST00000464425 NEURL3Q96EH8 262 aa15.52■□□□□ 0.08
VPS52-215ENST00000464425 STACQ99469 402 aa15.52■□□□□ 0.08
VPS52-215ENST00000464425 SLC35A5Q9BS91 424 aa15.52■□□□□ 0.08
VPS52-215ENST00000464425 BTBD2Q9BX70 525 aa15.52■□□□□ 0.08
VPS52-215ENST00000464425 RTN4RQ9BZR6 473 aa15.52■□□□□ 0.08
VPS52-215ENST00000464425 PAIP1Q9H074 479 aaKnown RBP15.52■□□□□ 0.08
VPS52-215ENST00000464425 PIGUQ9H490 435 aa15.52■□□□□ 0.08
VPS52-215ENST00000464425 ALKBH4Q9NXW9 302 aa15.52■□□□□ 0.08
VPS52-215ENST00000464425 PPP4R1LQ9P1A2 415 aa15.52■□□□□ 0.08
VPS52-215ENST00000464425 FBXL2Q9UKC9 423 aa15.52■□□□□ 0.08
VPS52-215ENST00000464425 KCNE3Q9Y6H6 103 aa15.52■□□□□ 0.08
VPS52-215ENST00000464425 ASH1LQ9NR48 2969 aaKnown RBP15.51■□□□□ 0.07
VPS52-215ENST00000464425 DOPEY1Q5JWR5 2465 aa15.51■□□□□ 0.07
VPS52-215ENST00000464425 RNF103-CHMP3A0A140T963 221 aa15.51■□□□□ 0.07
VPS52-215ENST00000464425 E9PLN8 166 aa15.51■□□□□ 0.07
VPS52-215ENST00000464425 ADAM10O14672 748 aa15.51■□□□□ 0.07
VPS52-215ENST00000464425 BCKDKO14874 412 aa15.51■□□□□ 0.07
VPS52-215ENST00000464425 CBR3O75828 277 aa15.51■□□□□ 0.07
VPS52-215ENST00000464425 ANP32DO95626 131 aa15.51■□□□□ 0.07
VPS52-215ENST00000464425 KRT16P08779 473 aa15.51■□□□□ 0.07
VPS52-215ENST00000464425 TCEA1P23193 301 aaKnown RBP15.51■□□□□ 0.07
VPS52-215ENST00000464425 MAGEA8P43361 318 aa15.51■□□□□ 0.07
VPS52-215ENST00000464425 CLK3P49761 638 aaKnown RBP15.51■□□□□ 0.07
VPS52-215ENST00000464425 ADORA2A-AS1P86434 159 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms