RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 MANFP55145 182 aaKnown RBP12.95□□□□□ -0.34
SNRNP40-203ENST00000463988 KEAP1Q14145 624 aa12.95□□□□□ -0.34
SNRNP40-203ENST00000463988 PCLAFQ15004 111 aa12.95□□□□□ -0.34
SNRNP40-203ENST00000463988 TMEM44Q2T9K0 475 aa12.95□□□□□ -0.34
SNRNP40-203ENST00000463988 RFTN2Q52LD8 501 aaPredicted RBP12.95□□□□□ -0.34
SNRNP40-203ENST00000463988 ZCCHC12Q6PEW1 402 aa12.95□□□□□ -0.34
SNRNP40-203ENST00000463988 UBQLNLQ8IYU4 475 aa12.95□□□□□ -0.34
SNRNP40-203ENST00000463988 C4orf33Q8N1A6 199 aa12.95□□□□□ -0.34
SNRNP40-203ENST00000463988 OR2T11Q8NH01 316 aa12.95□□□□□ -0.34
SNRNP40-203ENST00000463988 GPR151Q8TDV0 419 aa12.95□□□□□ -0.34
SNRNP40-203ENST00000463988 GFM2Q969S9 779 aaKnown RBP12.95□□□□□ -0.34
SNRNP40-203ENST00000463988 TUBB1Q9H4B7 451 aa12.95□□□□□ -0.34
SNRNP40-203ENST00000463988 L2HGDHQ9H9P8 463 aa12.95□□□□□ -0.34
SNRNP40-203ENST00000463988 RNF122Q9H9V4 155 aa12.95□□□□□ -0.34
SNRNP40-203ENST00000463988 ELOVL5Q9NYP7 299 aa12.95□□□□□ -0.34
SNRNP40-203ENST00000463988 STOML1Q9UBI4 398 aa12.95□□□□□ -0.34
SNRNP40-203ENST00000463988 TESMINQ9Y4I5 508 aa12.95□□□□□ -0.34
SNRNP40-203ENST00000463988 DNAJC15Q9Y5T4 150 aa12.95□□□□□ -0.34
SNRNP40-203ENST00000463988 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.94□□□□□ -0.34
SNRNP40-203ENST00000463988 A0A087WZY1 265 aa12.94□□□□□ -0.34
SNRNP40-203ENST00000463988 GXYLT2A0PJZ3 443 aa12.94□□□□□ -0.34
SNRNP40-203ENST00000463988 LSM1O15116 133 aaKnown RBP12.94□□□□□ -0.34
SNRNP40-203ENST00000463988 NPHS1O60500 1241 aa12.94□□□□□ -0.34
SNRNP40-203ENST00000463988 IGKV1D-16P01601 117 aa12.94□□□□□ -0.34
SNRNP40-203ENST00000463988 LINC00032P0C843 101 aa12.94□□□□□ -0.34
SNRNP40-203ENST00000463988 FOSL1P15407 271 aa12.94□□□□□ -0.34
SNRNP40-203ENST00000463988 TBXA2RP21731 343 aa12.94□□□□□ -0.34
SNRNP40-203ENST00000463988 CD79BP40259 229 aa12.94□□□□□ -0.34
SNRNP40-203ENST00000463988 KIR2DL2P43627 348 aaPredicted RBP12.94□□□□□ -0.34
SNRNP40-203ENST00000463988 RFX3P48380 749 aa12.94□□□□□ -0.34
SNRNP40-203ENST00000463988 RPS3AP61247 264 aaKnown RBP12.94□□□□□ -0.34
SNRNP40-203ENST00000463988 MLC1Q15049 377 aa12.94□□□□□ -0.34
SNRNP40-203ENST00000463988 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.94□□□□□ -0.34
SNRNP40-203ENST00000463988 DEFB113Q30KQ7 82 aa12.94□□□□□ -0.34
SNRNP40-203ENST00000463988 GRAMD1BQ3KR37 738 aa12.94□□□□□ -0.34
SNRNP40-203ENST00000463988 ZNF385BQ569K4 471 aa12.94□□□□□ -0.34
SNRNP40-203ENST00000463988 ANKRD26P1Q6NSI1 321 aa12.94□□□□□ -0.34
SNRNP40-203ENST00000463988 LRIG3Q6UXM1 1119 aa12.94□□□□□ -0.34
SNRNP40-203ENST00000463988 APOOLQ6UXV4 268 aa12.94□□□□□ -0.34
SNRNP40-203ENST00000463988 R3HCC1LQ7Z5L2 792 aaKnown RBP12.94□□□□□ -0.34
SNRNP40-203ENST00000463988 RIBC1Q8N443 379 aaPredicted RBP12.94□□□□□ -0.34
SNRNP40-203ENST00000463988 METTL25Q8N6Q8 603 aa12.94□□□□□ -0.34
SNRNP40-203ENST00000463988 CNEP1R1Q8N9A8 125 aa12.94□□□□□ -0.34
SNRNP40-203ENST00000463988 BANPQ8N9N5 519 aa12.94□□□□□ -0.34
SNRNP40-203ENST00000463988 NUP43Q8NFH3 380 aa12.94□□□□□ -0.34
SNRNP40-203ENST00000463988 OR6Y1Q8NGX8 325 aa12.94□□□□□ -0.34
SNRNP40-203ENST00000463988 FAM110BQ8TC76 370 aa12.94□□□□□ -0.34
SNRNP40-203ENST00000463988 FIG4Q92562 907 aa12.94□□□□□ -0.34
SNRNP40-203ENST00000463988 PIK3R3Q92569 461 aa12.94□□□□□ -0.34
SNRNP40-203ENST00000463988 CIDECQ96AQ7 238 aaPredicted RBP12.94□□□□□ -0.34
SNRNP40-203ENST00000463988 GIMAP5Q96F15 307 aa12.94□□□□□ -0.34
SNRNP40-203ENST00000463988 PGM2Q96G03 612 aa12.94□□□□□ -0.34
SNRNP40-203ENST00000463988 APOPT1Q96IL0 206 aa12.94□□□□□ -0.34
SNRNP40-203ENST00000463988 MS4A4EQ96PG1 132 aa12.94□□□□□ -0.34
SNRNP40-203ENST00000463988 TSSK3Q96PN8 268 aa12.94□□□□□ -0.34
SNRNP40-203ENST00000463988 SLC39A3Q9BRY0 314 aa12.94□□□□□ -0.34
SNRNP40-203ENST00000463988 EQTNQ9NQ60 294 aa12.94□□□□□ -0.34
SNRNP40-203ENST00000463988 SH3BP4Q9P0V3 963 aa12.94□□□□□ -0.34
SNRNP40-203ENST00000463988 EIF3LQ9Y262 564 aaKnown RBP12.94□□□□□ -0.34
SNRNP40-203ENST00000463988 PCNX3Q9H6A9 2034 aa12.94□□□□□ -0.34
SNRNP40-203ENST00000463988 NAV3Q8IVL0 2385 aa12.93□□□□□ -0.34
SNRNP40-203ENST00000463988 ZNF469Q96JG9 3925 aaPredicted RBP12.93□□□□□ -0.34
SNRNP40-203ENST00000463988 H0YC42 278 aa12.93□□□□□ -0.34
SNRNP40-203ENST00000463988 H3BML4 177 aa12.93□□□□□ -0.34
SNRNP40-203ENST00000463988 AKAP10O43572 662 aa12.93□□□□□ -0.34
SNRNP40-203ENST00000463988 SMNDC1O75940 238 aaKnown RBP eCLIP12.93□□□□□ -0.34
SNRNP40-203ENST00000463988 HSPA4LO95757 839 aa12.93□□□□□ -0.34
SNRNP40-203ENST00000463988 CGAP01215 116 aa12.93□□□□□ -0.34
SNRNP40-203ENST00000463988 CD8BP10966 210 aa12.93□□□□□ -0.34
SNRNP40-203ENST00000463988 FCGR2AP12318 317 aa12.93□□□□□ -0.34
SNRNP40-203ENST00000463988 BCKDHAP12694 445 aa12.93□□□□□ -0.34
SNRNP40-203ENST00000463988 ZNF17P17021 662 aa12.93□□□□□ -0.34
SNRNP40-203ENST00000463988 CPOXP36551 454 aa12.93□□□□□ -0.34
SNRNP40-203ENST00000463988 TPD52P55327 224 aaPredicted RBP12.93□□□□□ -0.34
SNRNP40-203ENST00000463988 CLDN20P56880 219 aa12.93□□□□□ -0.34
SNRNP40-203ENST00000463988 RPL38P63173 70 aaKnown RBP12.93□□□□□ -0.34
SNRNP40-203ENST00000463988 FAM27E3Q08E93 113 aa12.93□□□□□ -0.34
SNRNP40-203ENST00000463988 GUSBP1Q15486 140 aa12.93□□□□□ -0.34
SNRNP40-203ENST00000463988 KRTAP21-3Q3LHN1 58 aa12.93□□□□□ -0.34
SNRNP40-203ENST00000463988 UGT3A2Q3SY77 523 aa12.93□□□□□ -0.34
SNRNP40-203ENST00000463988 EXOSC6Q5RKV6 272 aaKnown RBP12.93□□□□□ -0.34
SNRNP40-203ENST00000463988 VWA1Q6PCB0 445 aa12.93□□□□□ -0.34
SNRNP40-203ENST00000463988 ZNF474Q6S9Z5 364 aaPredicted RBP12.93□□□□□ -0.34
SNRNP40-203ENST00000463988 BTLAQ7Z6A9 289 aa12.93□□□□□ -0.34
SNRNP40-203ENST00000463988 TRABD2AQ86V40 505 aa12.93□□□□□ -0.34
SNRNP40-203ENST00000463988 EXOC3L1Q86VI1 746 aa12.93□□□□□ -0.34
SNRNP40-203ENST00000463988 OR4C3Q8NH37 302 aa12.93□□□□□ -0.34
SNRNP40-203ENST00000463988 ACTRT2Q8TDY3 377 aa12.93□□□□□ -0.34
SNRNP40-203ENST00000463988 TRIM44Q96DX7 344 aaPredicted RBP12.93□□□□□ -0.34
SNRNP40-203ENST00000463988 ZNF845Q96IR2 970 aaPredicted RBP12.93□□□□□ -0.34
SNRNP40-203ENST00000463988 PINK1Q9BXM7 581 aa12.93□□□□□ -0.34
SNRNP40-203ENST00000463988 EML4Q9HC35 981 aaKnown RBP12.93□□□□□ -0.34
SNRNP40-203ENST00000463988 GIN1Q9NXP7 522 aa12.93□□□□□ -0.34
SNRNP40-203ENST00000463988 BAIAP2L1Q9UHR4 511 aa12.93□□□□□ -0.34
SNRNP40-203ENST00000463988 FIS1Q9Y3D6 152 aa12.93□□□□□ -0.34
SNRNP40-203ENST00000463988 TRAF6Q9Y4K3 522 aa12.93□□□□□ -0.34
SNRNP40-203ENST00000463988 C7orf72A4D263 438 aa12.92□□□□□ -0.34
SNRNP40-203ENST00000463988 TMEM114B3SHH9 223 aa12.92□□□□□ -0.34
SNRNP40-203ENST00000463988 SEC14L5O43304 696 aa12.92□□□□□ -0.34
SNRNP40-203ENST00000463988 CTIFO43310 598 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms