RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 MKLN1Q9UL63 735 aa9.24□□□□□ -0.93
PTPRD-207ENST00000463477 A4GNTQ9UNA3 340 aa9.24□□□□□ -0.93
PTPRD-207ENST00000463477 ENTPD4Q9Y227 616 aa9.24□□□□□ -0.93
PTPRD-207ENST00000463477 LIPT1Q9Y234 373 aa9.24□□□□□ -0.93
PTPRD-207ENST00000463477 A0A1W2PR48 441 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 EFCAB7A8K855 629 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.23□□□□□ -0.93
PTPRD-207ENST00000463477 J3QRK9 145 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 AGRPO00253 132 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 EMC8O43402 210 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 ERI3O43414 337 aaKnown RBP9.23□□□□□ -0.93
PTPRD-207ENST00000463477 UGT2B17O75795 530 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 STSP08842 583 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 OCM2P0CE71 109 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 OCMP0CE72 109 aaPredicted RBP9.23□□□□□ -0.93
PTPRD-207ENST00000463477 NR2F1P10589 423 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 CSNK2A2P19784 350 aaPredicted RBP9.23□□□□□ -0.93
PTPRD-207ENST00000463477 CD82P27701 267 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 CD40LGP29965 261 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 CLK1P49759 484 aaKnown RBP9.23□□□□□ -0.93
PTPRD-207ENST00000463477 RPS15AP62244 130 aaKnown RBP9.23□□□□□ -0.93
PTPRD-207ENST00000463477 PRR5P85299 388 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 RHAGQ02094 409 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 SEC23BQ15437 767 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 SYPL1Q16563 259 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 OCLNQ16625 522 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 CYP27C1Q4G0S4 372 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 PLAG1Q6DJT9 500 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 NIPAL1Q6NVV3 410 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 ARMC6Q6NXE6 501 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 LRRC69Q6ZNQ3 347 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 PTCHD4Q6ZW05 846 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 AMIGO1Q86WK6 493 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 PAQR7Q86WK9 346 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 KMT5CQ86Y97 462 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 SAMD14Q8IZD0 417 aaPredicted RBP9.23□□□□□ -0.93
PTPRD-207ENST00000463477 TMCO5AQ8N6Q1 288 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 OR4D11Q8NGI4 311 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 OR8J1Q8NGP2 316 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 NT5CQ8TCD5 201 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 JPH3Q8WXH2 748 aaPredicted RBP9.23□□□□□ -0.93
PTPRD-207ENST00000463477 GAL3ST3Q96A11 431 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 SLC22A18Q96BI1 424 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 SLC41A2Q96JW4 573 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 ZPBPQ9BS86 351 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 DDA1Q9BW61 102 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 ROGDIQ9GZN7 287 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 KLHL31Q9H511 634 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 ANKRD19PQ9H560 264 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 XKR8Q9H6D3 395 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 GIMAP4Q9NUV9 329 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 SLC39A1Q9NY26 324 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 hCG_2014768A0A024R1R8 64 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 IGHV5-51A0A0C4DH38 117 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 TLCD2A6NGC4 264 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 METTL15A6NJ78 407 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 C4orf51C9J302 202 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 BTN3A3O00478 584 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 MAGEB3O15480 346 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 PROM1O43490 865 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 OR10H3O60404 316 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 AIFM1O95831 613 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 TP53P04637 393 aaPredicted RBP9.23□□□□□ -0.93
PTPRD-207ENST00000463477 IFI6P09912 130 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 ENDOUP21128 410 aaKnown RBP9.23□□□□□ -0.93
PTPRD-207ENST00000463477 GSTM3P21266 225 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 MPIP34949 423 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 RGS6P49758 472 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 RELAQ04206 551 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 OXA1LQ15070 435 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 NCF4Q15080 339 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 ZNF404Q494X3 552 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 ENTPD8Q5MY95 495 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 DCAF12Q5T6F0 453 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 FAM180BQ6P0A1 224 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 C1orf94Q6P1W5 598 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 GDPGP1Q6ZNW5 385 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 DTX1Q86Y01 620 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 LACC1Q8IV20 430 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 AMER2Q8N7J2 671 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 OR8K5Q8NH50 307 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 SLC7A13Q8TCU3 470 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 XAGE5Q8WWM1 108 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 RPL3LQ92901 407 aaKnown RBP9.23□□□□□ -0.93
PTPRD-207ENST00000463477 ABTB1Q969K4 478 aaPredicted RBP9.23□□□□□ -0.93
PTPRD-207ENST00000463477 CNRIP1Q96F85 164 aaPredicted RBP9.23□□□□□ -0.93
PTPRD-207ENST00000463477 ZNF681Q96N22 645 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 MAP3K3Q99759 626 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 POLDIP3Q9BY77 421 aaKnown RBP9.23□□□□□ -0.93
PTPRD-207ENST00000463477 SPRY4Q9C004 299 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 POLR2J3Q9H1A7 115 aaKnown RBP9.23□□□□□ -0.93
PTPRD-207ENST00000463477 SIAEQ9HAT2 523 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 C3orf14Q9HBI5 128 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 SIDT1Q9NXL6 827 aaKnown RBP9.23□□□□□ -0.93
PTPRD-207ENST00000463477 SELENONQ9NZV5 590 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 ANKMY1Q9P2S6 941 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 TRPC4Q9UBN4 977 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.23□□□□□ -0.93
PTPRD-207ENST00000463477 IFT52Q9Y366 437 aa9.23□□□□□ -0.93
PTPRD-207ENST00000463477 ATG4BQ9Y4P1 393 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms