RNA–Protein interactions for RNA: ENST00000463007.5

HDAC4-208, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-208ENST00000463007 PHOSPHO2Q8TCD6 241 aa11.63□□□□□ -0.55
HDAC4-208ENST00000463007 BADQ92934 168 aa11.63□□□□□ -0.55
HDAC4-208ENST00000463007 NEURL3Q96EH8 262 aa11.63□□□□□ -0.55
HDAC4-208ENST00000463007 ZDHHC5Q9C0B5 715 aa11.63□□□□□ -0.55
HDAC4-208ENST00000463007 ATP13A2Q9NQ11 1180 aa11.63□□□□□ -0.55
HDAC4-208ENST00000463007 MAN2C1Q9NTJ4 1040 aa11.63□□□□□ -0.55
HDAC4-208ENST00000463007 ZSCAN32Q9NX65 697 aa11.63□□□□□ -0.55
HDAC4-208ENST00000463007 P2RX2Q9UBL9 471 aa11.63□□□□□ -0.55
HDAC4-208ENST00000463007 SF3B6Q9Y3B4 125 aaKnown RBP11.63□□□□□ -0.55
HDAC4-208ENST00000463007 TRIOO75962 3097 aa11.63□□□□□ -0.55
HDAC4-208ENST00000463007 LOC105371267A0A1B0GV96 52 aa11.63□□□□□ -0.55
HDAC4-208ENST00000463007 PGRMC2O15173 223 aa11.63□□□□□ -0.55
HDAC4-208ENST00000463007 ADH1CP00326 375 aa11.63□□□□□ -0.55
HDAC4-208ENST00000463007 HLA-DPB1P04440 258 aa11.63□□□□□ -0.55
HDAC4-208ENST00000463007 PAICSP22234 425 aaKnown RBP11.63□□□□□ -0.55
HDAC4-208ENST00000463007 GABRA5P31644 462 aa11.63□□□□□ -0.55
HDAC4-208ENST00000463007 VIPR2P41587 438 aa11.63□□□□□ -0.55
HDAC4-208ENST00000463007 HCCSP53701 268 aa11.63□□□□□ -0.55
HDAC4-208ENST00000463007 CLDN20P56880 219 aa11.63□□□□□ -0.55
HDAC4-208ENST00000463007 CRYZQ08257 329 aaKnown RBP11.63□□□□□ -0.55
HDAC4-208ENST00000463007 ESCO2Q56NI9 601 aa11.63□□□□□ -0.55
HDAC4-208ENST00000463007 ZNF311Q5JNZ3 666 aa11.63□□□□□ -0.55
HDAC4-208ENST00000463007 BHLHB9Q6PI77 547 aa11.63□□□□□ -0.55
HDAC4-208ENST00000463007 LYPD4Q6UWN0 246 aa11.63□□□□□ -0.55
HDAC4-208ENST00000463007 PIAS4Q8N2W9 510 aaPredicted RBP11.63□□□□□ -0.55
HDAC4-208ENST00000463007 TMEM163Q8TC26 289 aa11.63□□□□□ -0.55
HDAC4-208ENST00000463007 NUS1Q96E22 293 aa11.63□□□□□ -0.55
HDAC4-208ENST00000463007 SAMD8Q96LT4 415 aa11.63□□□□□ -0.55
HDAC4-208ENST00000463007 ORAI3Q9BRQ5 295 aa11.63□□□□□ -0.55
HDAC4-208ENST00000463007 DPEP2Q9H4A9 486 aa11.63□□□□□ -0.55
HDAC4-208ENST00000463007 CCDC86Q9H6F5 360 aaKnown RBP11.63□□□□□ -0.55
HDAC4-208ENST00000463007 WBP1LQ9NX94 342 aa11.63□□□□□ -0.55
HDAC4-208ENST00000463007 GLTPQ9NZD2 209 aa11.63□□□□□ -0.55
HDAC4-208ENST00000463007 TNFRSF10DQ9UBN6 386 aa11.63□□□□□ -0.55
HDAC4-208ENST00000463007 KLHL21Q9UJP4 597 aa11.63□□□□□ -0.55
HDAC4-208ENST00000463007 GPR34Q9UPC5 381 aa11.63□□□□□ -0.55
HDAC4-208ENST00000463007 SATB2Q9UPW6 733 aa11.63□□□□□ -0.55
HDAC4-208ENST00000463007 EDDM13A0A1B0GTR0 161 aa11.63□□□□□ -0.55
HDAC4-208ENST00000463007 PCP4L1A6NKN8 68 aa11.63□□□□□ -0.55
HDAC4-208ENST00000463007 FCARP24071 287 aa11.63□□□□□ -0.55
HDAC4-208ENST00000463007 OCLNQ16625 522 aa11.63□□□□□ -0.55
HDAC4-208ENST00000463007 MZT2AQ6P582 158 aa11.63□□□□□ -0.55
HDAC4-208ENST00000463007 FBXO46Q6PJ61 603 aaPredicted RBP11.63□□□□□ -0.55
HDAC4-208ENST00000463007 TMEM91Q6ZNR0 172 aa11.63□□□□□ -0.55
HDAC4-208ENST00000463007 ADGRD2Q7Z7M1 963 aa11.63□□□□□ -0.55
HDAC4-208ENST00000463007 OR11H7Q8NGC8 314 aa11.63□□□□□ -0.55
HDAC4-208ENST00000463007 OR2L2Q8NH16 312 aa11.63□□□□□ -0.55
HDAC4-208ENST00000463007 OR8K5Q8NH50 307 aa11.63□□□□□ -0.55
HDAC4-208ENST00000463007 APOBEC4Q8WW27 367 aaKnown RBP11.63□□□□□ -0.55
HDAC4-208ENST00000463007 RFT1Q96AA3 541 aa11.63□□□□□ -0.55
HDAC4-208ENST00000463007 ABHD1Q96SE0 405 aa11.63□□□□□ -0.55
HDAC4-208ENST00000463007 ARHGAP9Q9BRR9 750 aa11.63□□□□□ -0.55
HDAC4-208ENST00000463007 SIRT3Q9NTG7 399 aaPredicted RBP11.63□□□□□ -0.55
HDAC4-208ENST00000463007 RABL2AQ9UBK7 228 aaPredicted RBP11.63□□□□□ -0.55
HDAC4-208ENST00000463007 CDH10Q9Y6N8 788 aa11.63□□□□□ -0.55
HDAC4-208ENST00000463007 PRUNE2Q8WUY3 3088 aa11.62□□□□□ -0.55
HDAC4-208ENST00000463007 A0A1W2PRG6 482 aa11.62□□□□□ -0.55
HDAC4-208ENST00000463007 J3QLW9 94 aa11.62□□□□□ -0.55
HDAC4-208ENST00000463007 LCMT2O60294 686 aaKnown RBP11.62□□□□□ -0.55
HDAC4-208ENST00000463007 FCMRO60667 390 aa11.62□□□□□ -0.55
HDAC4-208ENST00000463007 HCN1O60741 890 aa11.62□□□□□ -0.55
HDAC4-208ENST00000463007 ZNF19P17023 458 aa11.62□□□□□ -0.55
HDAC4-208ENST00000463007 BNC1Q01954 994 aa11.62□□□□□ -0.55
HDAC4-208ENST00000463007 ELAVL3Q14576 367 aaKnown RBP11.62□□□□□ -0.55
HDAC4-208ENST00000463007 FAM78AQ5JUQ0 283 aa11.62□□□□□ -0.55
HDAC4-208ENST00000463007 NDUFAF5Q5TEU4 345 aa11.62□□□□□ -0.55
HDAC4-208ENST00000463007 KHDRBS2Q5VWX1 349 aaKnown RBP11.62□□□□□ -0.55
HDAC4-208ENST00000463007 FAM129CQ86XR2 697 aa11.62□□□□□ -0.55
HDAC4-208ENST00000463007 TBC1D19Q8N5T2 526 aa11.62□□□□□ -0.55
HDAC4-208ENST00000463007 SIRT6Q8N6T7 355 aa11.62□□□□□ -0.55
HDAC4-208ENST00000463007 ZNF680Q8NEM1 530 aa11.62□□□□□ -0.55
HDAC4-208ENST00000463007 GANCQ8TET4 914 aa11.62□□□□□ -0.55
HDAC4-208ENST00000463007 RIT1Q92963 219 aa11.62□□□□□ -0.55
HDAC4-208ENST00000463007 PMEPA1Q969W9 287 aa11.62□□□□□ -0.55
HDAC4-208ENST00000463007 ASB16Q96NS5 453 aa11.62□□□□□ -0.55
HDAC4-208ENST00000463007 DPH7Q9BTV6 452 aa11.62□□□□□ -0.55
HDAC4-208ENST00000463007 GLIPR2Q9H4G4 154 aa11.62□□□□□ -0.55
HDAC4-208ENST00000463007 SEMA4GQ9NTN9 838 aa11.62□□□□□ -0.55
HDAC4-208ENST00000463007 TAS2R7Q9NYW3 318 aa11.62□□□□□ -0.55
HDAC4-208ENST00000463007 AHSPQ9NZD4 102 aa11.62□□□□□ -0.55
HDAC4-208ENST00000463007 TEX13CA0A0J9YWL9 993 aa11.62□□□□□ -0.55
HDAC4-208ENST00000463007 E9PI62 339 aa11.62□□□□□ -0.55
HDAC4-208ENST00000463007 GNB5O14775 395 aa11.62□□□□□ -0.55
HDAC4-208ENST00000463007 CHP2O43745 196 aa11.62□□□□□ -0.55
HDAC4-208ENST00000463007 PROS1P07225 676 aa11.62□□□□□ -0.55
HDAC4-208ENST00000463007 TRHRP34981 398 aaPredicted RBP11.62□□□□□ -0.55
HDAC4-208ENST00000463007 RPL3P39023 403 aaKnown RBP11.62□□□□□ -0.55
HDAC4-208ENST00000463007 SF3A2Q15428 464 aaKnown RBP11.62□□□□□ -0.55
HDAC4-208ENST00000463007 HYAL4Q2M3T9 481 aa11.62□□□□□ -0.55
HDAC4-208ENST00000463007 SLC25A35Q3KQZ1 300 aa11.62□□□□□ -0.55
HDAC4-208ENST00000463007 SERPINA12Q8IW75 414 aa11.62□□□□□ -0.55
HDAC4-208ENST00000463007 KRT78Q8N1N4 520 aa11.62□□□□□ -0.55
HDAC4-208ENST00000463007 C9orf62Q8N4C0 152 aa11.62□□□□□ -0.55
HDAC4-208ENST00000463007 KLHL36Q8N4N3 616 aa11.62□□□□□ -0.55
HDAC4-208ENST00000463007 ZNF614Q8N883 585 aa11.62□□□□□ -0.55
HDAC4-208ENST00000463007 OR4Q3Q8NH05 313 aa11.62□□□□□ -0.55
HDAC4-208ENST00000463007 TMEM255BQ8WV15 326 aa11.62□□□□□ -0.55
HDAC4-208ENST00000463007 OR5P2Q8WZ92 322 aa11.62□□□□□ -0.55
HDAC4-208ENST00000463007 TFGQ92734 400 aaPredicted RBP11.62□□□□□ -0.55
HDAC4-208ENST00000463007 HYLS1Q96M11 299 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms