RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 SWI5Q1ZZU3 235 aa10.77□□□□□ -0.69
TRAPPC3-205ENST00000462715 RFTN2Q52LD8 501 aaPredicted RBP10.77□□□□□ -0.69
TRAPPC3-205ENST00000462715 FAM76BQ5HYJ3 339 aa10.77□□□□□ -0.69
TRAPPC3-205ENST00000462715 FAM219BQ5XKK7 198 aa10.77□□□□□ -0.69
TRAPPC3-205ENST00000462715 PTCHD4Q6ZW05 846 aa10.77□□□□□ -0.69
TRAPPC3-205ENST00000462715 TRIM46Q7Z4K8 759 aa10.77□□□□□ -0.69
TRAPPC3-205ENST00000462715 TSPAN33Q86UF1 283 aa10.77□□□□□ -0.69
TRAPPC3-205ENST00000462715 PDZD9Q8IXQ8 264 aa10.77□□□□□ -0.69
TRAPPC3-205ENST00000462715 FTMTQ8N4E7 242 aa10.77□□□□□ -0.69
TRAPPC3-205ENST00000462715 PIGKQ92643 395 aa10.77□□□□□ -0.69
TRAPPC3-205ENST00000462715 KLK6Q92876 244 aa10.77□□□□□ -0.69
TRAPPC3-205ENST00000462715 RFT1Q96AA3 541 aa10.77□□□□□ -0.69
TRAPPC3-205ENST00000462715 MS4A7Q9GZW8 240 aaPredicted RBP10.77□□□□□ -0.69
TRAPPC3-205ENST00000462715 ZFYVE1Q9HBF4 777 aa10.77□□□□□ -0.69
TRAPPC3-205ENST00000462715 POLE3Q9NRF9 147 aa10.77□□□□□ -0.69
TRAPPC3-205ENST00000462715 GSN-AS1Q9NRJ2 163 aa10.77□□□□□ -0.69
TRAPPC3-205ENST00000462715 NCDNQ9UBB6 729 aa10.77□□□□□ -0.69
TRAPPC3-205ENST00000462715 GALPQ9UBC7 116 aa10.77□□□□□ -0.69
TRAPPC3-205ENST00000462715 PILRBQ9UKJ0 227 aa10.77□□□□□ -0.69
TRAPPC3-205ENST00000462715 MGAT4BQ9UQ53 548 aa10.77□□□□□ -0.69
TRAPPC3-205ENST00000462715 TRDV1A0A1B0GX56 115 aa10.76□□□□□ -0.69
TRAPPC3-205ENST00000462715 TRABD2BA6NFA1 517 aa10.76□□□□□ -0.69
TRAPPC3-205ENST00000462715 PAK4O96013 591 aaPredicted RBP10.76□□□□□ -0.69
TRAPPC3-205ENST00000462715 HIST1H2AGP0C0S8 130 aaPredicted RBP10.76□□□□□ -0.69
TRAPPC3-205ENST00000462715 HIST1H2ADP20671 130 aa10.76□□□□□ -0.69
TRAPPC3-205ENST00000462715 AHCYP23526 432 aa10.76□□□□□ -0.69
TRAPPC3-205ENST00000462715 MAPK3P27361 379 aaPredicted RBP10.76□□□□□ -0.69
TRAPPC3-205ENST00000462715 RFX3P48380 749 aa10.76□□□□□ -0.69
TRAPPC3-205ENST00000462715 STC1P52823 247 aa10.76□□□□□ -0.69
TRAPPC3-205ENST00000462715 HMGA2P52926 109 aa10.76□□□□□ -0.69
TRAPPC3-205ENST00000462715 AGERQ15109 404 aa10.76□□□□□ -0.69
TRAPPC3-205ENST00000462715 HIST2H2AA3Q6FI13 130 aa10.76□□□□□ -0.69
TRAPPC3-205ENST00000462715 ABI3BPQ7Z7G0 1075 aa10.76□□□□□ -0.69
TRAPPC3-205ENST00000462715 PIAS4Q8N2W9 510 aaPredicted RBP10.76□□□□□ -0.69
TRAPPC3-205ENST00000462715 OR6C4Q8NGE1 309 aa10.76□□□□□ -0.69
TRAPPC3-205ENST00000462715 FAM174AQ8TBP5 190 aa10.76□□□□□ -0.69
TRAPPC3-205ENST00000462715 HIST1H2AHQ96KK5 128 aa10.76□□□□□ -0.69
TRAPPC3-205ENST00000462715 TBATAQ96M53 351 aa10.76□□□□□ -0.69
TRAPPC3-205ENST00000462715 HIST1H2AJQ99878 128 aa10.76□□□□□ -0.69
TRAPPC3-205ENST00000462715 ATF6BQ99941 703 aa10.76□□□□□ -0.69
TRAPPC3-205ENST00000462715 NLNQ9BYT8 704 aa10.76□□□□□ -0.69
TRAPPC3-205ENST00000462715 FTSJ1Q9UET6 329 aa10.76□□□□□ -0.69
TRAPPC3-205ENST00000462715 CORO2BQ9UQ03 480 aa10.76□□□□□ -0.69
TRAPPC3-205ENST00000462715 TRPM6Q9BX84 2022 aa10.76□□□□□ -0.69
TRAPPC3-205ENST00000462715 PLSCR5A0PG75 271 aa10.76□□□□□ -0.69
TRAPPC3-205ENST00000462715 BCAT2O15382 392 aaPredicted RBP10.76□□□□□ -0.69
TRAPPC3-205ENST00000462715 AQP8O94778 261 aa10.76□□□□□ -0.69
TRAPPC3-205ENST00000462715 CLDN7O95471 211 aa10.76□□□□□ -0.69
TRAPPC3-205ENST00000462715 PIRTP0C851 137 aa10.76□□□□□ -0.69
TRAPPC3-205ENST00000462715 SPI1P17947 270 aa10.76□□□□□ -0.69
TRAPPC3-205ENST00000462715 PPIBP23284 216 aaKnown RBP10.76□□□□□ -0.69
TRAPPC3-205ENST00000462715 MPLP40238 635 aa10.76□□□□□ -0.69
TRAPPC3-205ENST00000462715 SOX3P41225 446 aa10.76□□□□□ -0.69
TRAPPC3-205ENST00000462715 AFF3P51826 1226 aaKnown RBP10.76□□□□□ -0.69
TRAPPC3-205ENST00000462715 NR0B1P51843 470 aaKnown RBP10.76□□□□□ -0.69
TRAPPC3-205ENST00000462715 KCNJ10P78508 379 aa10.76□□□□□ -0.69
TRAPPC3-205ENST00000462715 C2orf80Q0P641 193 aa10.76□□□□□ -0.69
TRAPPC3-205ENST00000462715 PTPRRQ15256 657 aa10.76□□□□□ -0.69
TRAPPC3-205ENST00000462715 TEAD4Q15561 434 aa10.76□□□□□ -0.69
TRAPPC3-205ENST00000462715 OCLNQ16625 522 aa10.76□□□□□ -0.69
TRAPPC3-205ENST00000462715 SLC25A30Q5SVS4 291 aa10.76□□□□□ -0.69
TRAPPC3-205ENST00000462715 PEAR1Q5VY43 1037 aaPredicted RBP10.76□□□□□ -0.69
TRAPPC3-205ENST00000462715 SCIMPQ6UWF3 145 aa10.76□□□□□ -0.69
TRAPPC3-205ENST00000462715 C17orf107Q6ZR85 190 aa10.76□□□□□ -0.69
TRAPPC3-205ENST00000462715 IKBIPQ70UQ0 350 aa10.76□□□□□ -0.69
TRAPPC3-205ENST00000462715 NLRC3Q7RTR2 1065 aa10.76□□□□□ -0.69
TRAPPC3-205ENST00000462715 GLT6D1Q7Z4J2 308 aa10.76□□□□□ -0.69
TRAPPC3-205ENST00000462715 LAPTM4BQ86VI4 370 aa10.76□□□□□ -0.69
TRAPPC3-205ENST00000462715 TMEM17Q86X19 198 aa10.76□□□□□ -0.69
TRAPPC3-205ENST00000462715 SPICQ8N5J4 248 aa10.76□□□□□ -0.69
TRAPPC3-205ENST00000462715 SLC5A8Q8N695 610 aa10.76□□□□□ -0.69
TRAPPC3-205ENST00000462715 KCTD12Q96CX2 325 aaKnown RBP10.76□□□□□ -0.69
TRAPPC3-205ENST00000462715 NUS1Q96E22 293 aa10.76□□□□□ -0.69
TRAPPC3-205ENST00000462715 MRPS24Q96EL2 167 aaKnown RBP10.76□□□□□ -0.69
TRAPPC3-205ENST00000462715 RBM14Q96PK6 669 aaKnown RBP10.76□□□□□ -0.69
TRAPPC3-205ENST00000462715 SMIM14Q96QK8 99 aa10.76□□□□□ -0.69
TRAPPC3-205ENST00000462715 TREX2Q9BQ50 279 aaPredicted RBP10.76□□□□□ -0.69
TRAPPC3-205ENST00000462715 PTDSS2Q9BVG9 487 aa10.76□□□□□ -0.69
TRAPPC3-205ENST00000462715 SLC25A32Q9H2D1 315 aa10.76□□□□□ -0.69
TRAPPC3-205ENST00000462715 ARRDC1-AS1Q9H2J1 176 aa10.76□□□□□ -0.69
TRAPPC3-205ENST00000462715 THSD1Q9NS62 852 aa10.76□□□□□ -0.69
TRAPPC3-205ENST00000462715 EDARQ9UNE0 448 aa10.76□□□□□ -0.69
TRAPPC3-205ENST00000462715 PCDHGA9Q9Y5G4 932 aaKnown RBP10.76□□□□□ -0.69
TRAPPC3-205ENST00000462715 SULT1C2O00338 296 aa10.75□□□□□ -0.69
TRAPPC3-205ENST00000462715 FPGTO14772 594 aa10.75□□□□□ -0.69
TRAPPC3-205ENST00000462715 SUV39H1O43463 412 aa10.75□□□□□ -0.69
TRAPPC3-205ENST00000462715 HTR3BO95264 441 aa10.75□□□□□ -0.69
TRAPPC3-205ENST00000462715 KCNK5O95279 499 aa10.75□□□□□ -0.69
TRAPPC3-205ENST00000462715 PLATP00750 562 aa10.75□□□□□ -0.69
TRAPPC3-205ENST00000462715 LPLP06858 475 aa10.75□□□□□ -0.69
TRAPPC3-205ENST00000462715 BPIP17213 487 aa10.75□□□□□ -0.69
TRAPPC3-205ENST00000462715 RHCEP18577 417 aa10.75□□□□□ -0.69
TRAPPC3-205ENST00000462715 SSTR4P31391 388 aa10.75□□□□□ -0.69
TRAPPC3-205ENST00000462715 PIK3CGP48736 1102 aa10.75□□□□□ -0.69
TRAPPC3-205ENST00000462715 GDI2P50395 445 aaKnown RBP10.75□□□□□ -0.69
TRAPPC3-205ENST00000462715 PTSQ03393 145 aa10.75□□□□□ -0.69
TRAPPC3-205ENST00000462715 RELQ04864 619 aaPredicted RBP10.75□□□□□ -0.69
TRAPPC3-205ENST00000462715 FGL2Q14314 439 aa10.75□□□□□ -0.69
TRAPPC3-205ENST00000462715 PUM1Q14671 1186 aaKnown RBP eCLIP10.75□□□□□ -0.69
TRAPPC3-205ENST00000462715 P2RY14Q15391 338 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms