RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 HM13Q8TCT9 377 aa4.39□□□□□ -1.71
COPS3-204ENST00000462236 CA5BP1Q8WTZ4 195 aa4.39□□□□□ -1.71
COPS3-204ENST00000462236 C8orf44Q96CB5 159 aa4.39□□□□□ -1.71
COPS3-204ENST00000462236 ORAI1Q96D31 301 aa4.39□□□□□ -1.71
COPS3-204ENST00000462236 SAT2Q96F10 170 aaPredicted RBP4.39□□□□□ -1.71
COPS3-204ENST00000462236 ZNF479Q96JC4 524 aa4.39□□□□□ -1.71
COPS3-204ENST00000462236 MAGED4Q96JG8 741 aa4.39□□□□□ -1.71
COPS3-204ENST00000462236 IMMP1LQ96LU5 166 aa4.39□□□□□ -1.71
COPS3-204ENST00000462236 NPAS2Q99743 824 aa4.39□□□□□ -1.71
COPS3-204ENST00000462236 AGPAT1Q99943 283 aa4.39□□□□□ -1.71
COPS3-204ENST00000462236 ZNF559Q9BR84 538 aa4.39□□□□□ -1.71
COPS3-204ENST00000462236 CCM2Q9BSQ5 444 aa4.39□□□□□ -1.71
COPS3-204ENST00000462236 WACQ9BTA9 647 aa4.39□□□□□ -1.71
COPS3-204ENST00000462236 UGT1A7Q9HAW7 530 aa4.39□□□□□ -1.71
COPS3-204ENST00000462236 UGT1A10Q9HAW8 530 aa4.39□□□□□ -1.71
COPS3-204ENST00000462236 UGT1A8Q9HAW9 530 aa4.39□□□□□ -1.71
COPS3-204ENST00000462236 ZNF160Q9HCG1 818 aa4.39□□□□□ -1.71
COPS3-204ENST00000462236 TXLNGQ9NUQ3 528 aa4.39□□□□□ -1.71
COPS3-204ENST00000462236 GIMAP4Q9NUV9 329 aa4.39□□□□□ -1.71
COPS3-204ENST00000462236 PARVAQ9NVD7 372 aa4.39□□□□□ -1.71
COPS3-204ENST00000462236 SPHK1Q9NYA1 384 aa4.39□□□□□ -1.71
COPS3-204ENST00000462236 PSD3Q9NYI0 1048 aa4.39□□□□□ -1.71
COPS3-204ENST00000462236 EURLQ9NYK6 297 aa4.39□□□□□ -1.71
COPS3-204ENST00000462236 ZNF224Q9NZL3 707 aa4.39□□□□□ -1.71
COPS3-204ENST00000462236 C1RLQ9NZP8 487 aa4.39□□□□□ -1.71
COPS3-204ENST00000462236 PLCL2Q9UPR0 1127 aa4.39□□□□□ -1.71
COPS3-204ENST00000462236 RNF6Q9Y252 685 aa4.39□□□□□ -1.71
COPS3-204ENST00000462236 PLEKHA6Q9Y2H5 1048 aa4.39□□□□□ -1.71
COPS3-204ENST00000462236 R3HDM2Q9Y2K5 976 aaKnown RBP4.39□□□□□ -1.71
COPS3-204ENST00000462236 L3MBTL1Q9Y468 752 aa4.39□□□□□ -1.71
COPS3-204ENST00000462236 ATP6V1DQ9Y5K8 247 aa4.39□□□□□ -1.71
COPS3-204ENST00000462236 CMYA5Q8N3K9 4069 aa4.39□□□□□ -1.71
COPS3-204ENST00000462236 TRRAPQ9Y4A5 3859 aa4.39□□□□□ -1.71
COPS3-204ENST00000462236 PRKDCP78527 4128 aaKnown RBP4.38□□□□□ -1.71
COPS3-204ENST00000462236 IGLV3-16A0A075B6K0 115 aa4.38□□□□□ -1.71
COPS3-204ENST00000462236 LOC285095A0A1B0GVY8 99 aa4.38□□□□□ -1.71
COPS3-204ENST00000462236 A0A1W2PQ09 198 aa4.38□□□□□ -1.71
COPS3-204ENST00000462236 NKX2-6A6NCS4 301 aa4.38□□□□□ -1.71
COPS3-204ENST00000462236 ZNHIT1O43257 154 aa4.38□□□□□ -1.71
COPS3-204ENST00000462236 LY6G6DO95868 133 aa4.38□□□□□ -1.71
COPS3-204ENST00000462236 F10P00742 488 aa4.38□□□□□ -1.71
COPS3-204ENST00000462236 TPOP07202 933 aa4.38□□□□□ -1.71
COPS3-204ENST00000462236 CD48P09326 243 aa4.38□□□□□ -1.71
COPS3-204ENST00000462236 SLC35G4P0C7Q5 338 aa4.38□□□□□ -1.71
COPS3-204ENST00000462236 GZMAP12544 262 aa4.38□□□□□ -1.71
COPS3-204ENST00000462236 DESP17661 470 aa4.38□□□□□ -1.71
COPS3-204ENST00000462236 ANXA7P20073 488 aaKnown RBP4.38□□□□□ -1.71
COPS3-204ENST00000462236 SAT1P21673 171 aa4.38□□□□□ -1.71
COPS3-204ENST00000462236 PDHA2P29803 388 aa4.38□□□□□ -1.71
COPS3-204ENST00000462236 PBLDP30039 288 aaPredicted RBP4.38□□□□□ -1.71
COPS3-204ENST00000462236 CHRNB4P30926 498 aa4.38□□□□□ -1.71
COPS3-204ENST00000462236 SPAM1P38567 509 aa4.38□□□□□ -1.71
COPS3-204ENST00000462236 APOBEC1P41238 236 aaKnown RBP4.38□□□□□ -1.71
COPS3-204ENST00000462236 SLC15A1P46059 708 aa4.38□□□□□ -1.71
COPS3-204ENST00000462236 MFAP4P55083 255 aa4.38□□□□□ -1.71
COPS3-204ENST00000462236 DSCR9P59020 149 aa4.38□□□□□ -1.71
COPS3-204ENST00000462236 NANOS2P60321 138 aaKnown RBP4.38□□□□□ -1.71
COPS3-204ENST00000462236 XIAPP98170 497 aa4.38□□□□□ -1.71
COPS3-204ENST00000462236 PPIDQ08752 370 aaKnown RBP4.38□□□□□ -1.71
COPS3-204ENST00000462236 ZNF155Q12901 538 aaPredicted RBP4.38□□□□□ -1.71
COPS3-204ENST00000462236 DLG1Q12959 904 aa4.38□□□□□ -1.71
COPS3-204ENST00000462236 MYBPHQ13203 477 aa4.38□□□□□ -1.71
COPS3-204ENST00000462236 ITGA9Q13797 1035 aa4.38□□□□□ -1.71
COPS3-204ENST00000462236 DPYSL3Q14195 570 aa4.38□□□□□ -1.71
COPS3-204ENST00000462236 NTRK2Q16620 822 aa4.38□□□□□ -1.71
COPS3-204ENST00000462236 FAM182AQ5T1J6 154 aa4.38□□□□□ -1.71
COPS3-204ENST00000462236 WDR73Q6P4I2 378 aa4.38□□□□□ -1.71
COPS3-204ENST00000462236 KDELC1Q6UW63 502 aa4.38□□□□□ -1.71
COPS3-204ENST00000462236 TMEM205Q6UW68 189 aa4.38□□□□□ -1.71
COPS3-204ENST00000462236 PAMR1Q6UXH9 720 aa4.38□□□□□ -1.71
COPS3-204ENST00000462236 SHISA6Q6ZSJ9 500 aa4.38□□□□□ -1.71
COPS3-204ENST00000462236 NLRP9Q7RTR0 991 aa4.38□□□□□ -1.71
COPS3-204ENST00000462236 AMIGO1Q86WK6 493 aa4.38□□□□□ -1.71
COPS3-204ENST00000462236 CREBRFQ8IUR6 639 aa4.38□□□□□ -1.71
COPS3-204ENST00000462236 C17orf53Q8N3J3 647 aaPredicted RBP4.38□□□□□ -1.71
COPS3-204ENST00000462236 CPSF7Q8N684 471 aaKnown RBP4.38□□□□□ -1.71
COPS3-204ENST00000462236 PQLC3Q8N755 202 aa4.38□□□□□ -1.71
COPS3-204ENST00000462236 POC5Q8NA72 575 aa4.38□□□□□ -1.71
COPS3-204ENST00000462236 NAT14Q8WUY8 206 aa4.38□□□□□ -1.71
COPS3-204ENST00000462236 TANKQ92844 425 aa4.38□□□□□ -1.71
COPS3-204ENST00000462236 GRAMD2BQ96HH9 432 aa4.38□□□□□ -1.71
COPS3-204ENST00000462236 TTC25Q96NG3 672 aa4.38□□□□□ -1.71
COPS3-204ENST00000462236 QRFPRQ96P65 431 aa4.38□□□□□ -1.71
COPS3-204ENST00000462236 SIGLEC12Q96PQ1 595 aa4.38□□□□□ -1.71
COPS3-204ENST00000462236 MRPL1Q9BYD6 325 aaKnown RBP4.38□□□□□ -1.71
COPS3-204ENST00000462236 HES7Q9BYE0 225 aa4.38□□□□□ -1.71
COPS3-204ENST00000462236 UCK2Q9BZX2 261 aa4.38□□□□□ -1.71
COPS3-204ENST00000462236 SLC25A51Q9H1U9 297 aa4.38□□□□□ -1.71
COPS3-204ENST00000462236 TRABDQ9H4I3 376 aa4.38□□□□□ -1.71
COPS3-204ENST00000462236 XKR8Q9H6D3 395 aa4.38□□□□□ -1.71
COPS3-204ENST00000462236 CUTCQ9NTM9 273 aa4.38□□□□□ -1.71
COPS3-204ENST00000462236 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.38□□□□□ -1.71
COPS3-204ENST00000462236 AMDHD2Q9Y303 409 aa4.38□□□□□ -1.71
COPS3-204ENST00000462236 KLK4Q9Y5K2 254 aa4.38□□□□□ -1.71
COPS3-204ENST00000462236 TENM1Q9UKZ4 2725 aa4.38□□□□□ -1.71
COPS3-204ENST00000462236 HEATR1Q9H583 2144 aaKnown RBP4.37□□□□□ -1.71
COPS3-204ENST00000462236 NSG1A0A0A6YYJ2 146 aa4.37□□□□□ -1.71
COPS3-204ENST00000462236 GLYATL1P3A0A0U1RQE8 302 aa4.37□□□□□ -1.71
COPS3-204ENST00000462236 MAGEA13PA6NCF6 341 aa4.37□□□□□ -1.71
COPS3-204ENST00000462236 FAM90A26D6RGX4 464 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms