RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 MPIP34949 423 aa9.68□□□□□ -0.86
CBX3-205ENST00000462165 SERPINB8P50452 374 aa9.68□□□□□ -0.86
CBX3-205ENST00000462165 RAE1P78406 368 aaKnown RBP9.68□□□□□ -0.86
CBX3-205ENST00000462165 GUCY2DQ02846 1103 aa9.68□□□□□ -0.86
CBX3-205ENST00000462165 C17orf67Q0P5P2 114 aa9.68□□□□□ -0.86
CBX3-205ENST00000462165 ZNF155Q12901 538 aaPredicted RBP9.68□□□□□ -0.86
CBX3-205ENST00000462165 HEPACAMQ14CZ8 416 aa9.68□□□□□ -0.86
CBX3-205ENST00000462165 DECR1Q16698 335 aa9.68□□□□□ -0.86
CBX3-205ENST00000462165 PGGHGQ32M88 737 aa9.68□□□□□ -0.86
CBX3-205ENST00000462165 ZNF672Q499Z4 452 aaPredicted RBP9.68□□□□□ -0.86
CBX3-205ENST00000462165 SH2D4BQ5SQS7 431 aa9.68□□□□□ -0.86
CBX3-205ENST00000462165 LGSNQ5TDP6 509 aa9.68□□□□□ -0.86
CBX3-205ENST00000462165 RPS27LQ71UM5 84 aaKnown RBP9.68□□□□□ -0.86
CBX3-205ENST00000462165 MARCH3Q86UD3 253 aa9.68□□□□□ -0.86
CBX3-205ENST00000462165 EXOC3L1Q86VI1 746 aa9.68□□□□□ -0.86
CBX3-205ENST00000462165 CCDC25Q86WR0 208 aa9.68□□□□□ -0.86
CBX3-205ENST00000462165 ZNF483Q8TF39 744 aaPredicted RBP9.68□□□□□ -0.86
CBX3-205ENST00000462165 S100PBPQ96BU1 408 aa9.68□□□□□ -0.86
CBX3-205ENST00000462165 C11orf24Q96F05 449 aaPredicted RBP9.68□□□□□ -0.86
CBX3-205ENST00000462165 HBEGFQ99075 208 aa9.68□□□□□ -0.86
CBX3-205ENST00000462165 HDHD5Q9BXW7 423 aa9.68□□□□□ -0.86
CBX3-205ENST00000462165 SHCBP1LQ9BZQ2 653 aa9.68□□□□□ -0.86
CBX3-205ENST00000462165 GRIP2Q9C0E4 1043 aa9.68□□□□□ -0.86
CBX3-205ENST00000462165 VPS11Q9H270 941 aa9.68□□□□□ -0.86
CBX3-205ENST00000462165 ESRP2Q9H6T0 727 aaKnown RBP9.68□□□□□ -0.86
CBX3-205ENST00000462165 BARX1Q9HBU1 254 aaPredicted RBP9.68□□□□□ -0.86
CBX3-205ENST00000462165 Q9N2J8 555 aa9.68□□□□□ -0.86
CBX3-205ENST00000462165 NGBQ9NPG2 151 aa9.68□□□□□ -0.86
CBX3-205ENST00000462165 SLC35C2Q9NQQ7 365 aa9.68□□□□□ -0.86
CBX3-205ENST00000462165 SENP1Q9P0U3 644 aa9.68□□□□□ -0.86
CBX3-205ENST00000462165 XPR1Q9UBH6 696 aa9.68□□□□□ -0.86
CBX3-205ENST00000462165 ZNF225Q9UK10 706 aa9.68□□□□□ -0.86
CBX3-205ENST00000462165 MRTO4Q9UKD2 239 aaKnown RBP9.68□□□□□ -0.86
CBX3-205ENST00000462165 CDC42EP3Q9UKI2 254 aa9.68□□□□□ -0.86
CBX3-205ENST00000462165 SNX8Q9Y5X2 465 aa9.68□□□□□ -0.86
CBX3-205ENST00000462165 CADP27708 2225 aa9.67□□□□□ -0.86
CBX3-205ENST00000462165 A0A087WV62 115 aa9.67□□□□□ -0.86
CBX3-205ENST00000462165 MYO1GB0I1T2 1018 aa9.67□□□□□ -0.86
CBX3-205ENST00000462165 ADAMDEC1O15204 470 aa9.67□□□□□ -0.86
CBX3-205ENST00000462165 RAD51CO43502 376 aa9.67□□□□□ -0.86
CBX3-205ENST00000462165 CXCL13O43927 109 aa9.67□□□□□ -0.86
CBX3-205ENST00000462165 PCDH7O60245 1069 aa9.67□□□□□ -0.86
CBX3-205ENST00000462165 NDUFS7O75251 213 aa9.67□□□□□ -0.86
CBX3-205ENST00000462165 GCM2O75603 506 aaPredicted RBP9.67□□□□□ -0.86
CBX3-205ENST00000462165 SLITRK5O94991 958 aa9.67□□□□□ -0.86
CBX3-205ENST00000462165 SYNGR4O95473 234 aa9.67□□□□□ -0.86
CBX3-205ENST00000462165 ANGPTL1O95841 491 aa9.67□□□□□ -0.86
CBX3-205ENST00000462165 PSMD4P55036 377 aaKnown RBP9.67□□□□□ -0.86
CBX3-205ENST00000462165 PLTPP55058 493 aa9.67□□□□□ -0.86
CBX3-205ENST00000462165 CDH13P55290 713 aa9.67□□□□□ -0.86
CBX3-205ENST00000462165 PRR5P85299 388 aa9.67□□□□□ -0.86
CBX3-205ENST00000462165 CAV1Q03135 178 aa9.67□□□□□ -0.86
CBX3-205ENST00000462165 CSTF3Q12996 717 aaKnown RBP9.67□□□□□ -0.86
CBX3-205ENST00000462165 TAB1Q15750 504 aa9.67□□□□□ -0.86
CBX3-205ENST00000462165 C6orf52Q5T4I8 152 aa9.67□□□□□ -0.86
CBX3-205ENST00000462165 FAM219BQ5XKK7 198 aa9.67□□□□□ -0.86
CBX3-205ENST00000462165 GTF2IRD2BQ6EKJ0 949 aa9.67□□□□□ -0.86
CBX3-205ENST00000462165 MFSD12Q6NUT3 480 aa9.67□□□□□ -0.86
CBX3-205ENST00000462165 FIGNL1Q6PIW4 674 aa9.67□□□□□ -0.86
CBX3-205ENST00000462165 APOOLQ6UXV4 268 aa9.67□□□□□ -0.86
CBX3-205ENST00000462165 ESPNLQ6ZVH7 1005 aa9.67□□□□□ -0.86
CBX3-205ENST00000462165 GALNT10Q86SR1 603 aa9.67□□□□□ -0.86
CBX3-205ENST00000462165 GTF2IRD2Q86UP8 949 aa9.67□□□□□ -0.86
CBX3-205ENST00000462165 WDR75Q8IWA0 830 aaKnown RBP9.67□□□□□ -0.86
CBX3-205ENST00000462165 GABRG1Q8N1C3 465 aa9.67□□□□□ -0.86
CBX3-205ENST00000462165 FBXO25Q8TCJ0 367 aa9.67□□□□□ -0.86
CBX3-205ENST00000462165 C16orf78Q8WTQ4 265 aa9.67□□□□□ -0.86
CBX3-205ENST00000462165 NEUROG1Q92886 237 aa9.67□□□□□ -0.86
CBX3-205ENST00000462165 MRRFQ96E11 262 aaKnown RBP9.67□□□□□ -0.86
CBX3-205ENST00000462165 HS6ST2Q96MM7 605 aa9.67□□□□□ -0.86
CBX3-205ENST00000462165 BBS4Q96RK4 519 aa9.67□□□□□ -0.86
CBX3-205ENST00000462165 NAPGQ99747 312 aaPredicted RBP9.67□□□□□ -0.86
CBX3-205ENST00000462165 TRAF4Q9BUZ4 470 aaPredicted RBP9.67□□□□□ -0.86
CBX3-205ENST00000462165 C1QTNF3Q9BXJ4 246 aa9.67□□□□□ -0.86
CBX3-205ENST00000462165 TBL1XR1Q9BZK7 514 aa9.67□□□□□ -0.86
CBX3-205ENST00000462165 C12orf49Q9H741 205 aa9.67□□□□□ -0.86
CBX3-205ENST00000462165 TMEM160Q9NX00 188 aa9.67□□□□□ -0.86
CBX3-205ENST00000462165 NFU1Q9UMS0 254 aa9.67□□□□□ -0.86
CBX3-205ENST00000462165 C19orf53Q9UNZ5 99 aaPredicted RBP9.67□□□□□ -0.86
CBX3-205ENST00000462165 VDAC3Q9Y277 283 aa9.67□□□□□ -0.86
CBX3-205ENST00000462165 A0A087WZY1 265 aa9.66□□□□□ -0.86
CBX3-205ENST00000462165 A0A096LNT2 108 aa9.66□□□□□ -0.86
CBX3-205ENST00000462165 GNG14A0A1W2PPG7 69 aa9.66□□□□□ -0.86
CBX3-205ENST00000462165 C7orf72A4D263 438 aa9.66□□□□□ -0.86
CBX3-205ENST00000462165 TNFSF11O14788 317 aa9.66□□□□□ -0.86
CBX3-205ENST00000462165 GPRIN2O60269 458 aa9.66□□□□□ -0.86
CBX3-205ENST00000462165 OR4F21O95013 312 aa9.66□□□□□ -0.86
CBX3-205ENST00000462165 UTS2O95399 124 aa9.66□□□□□ -0.86
CBX3-205ENST00000462165 PSMG1O95456 288 aa9.66□□□□□ -0.86
CBX3-205ENST00000462165 FESP07332 822 aa9.66□□□□□ -0.86
CBX3-205ENST00000462165 CHN1P15882 459 aa9.66□□□□□ -0.86
CBX3-205ENST00000462165 ADH6P28332 368 aa9.66□□□□□ -0.86
CBX3-205ENST00000462165 MAGEA12P43365 314 aa9.66□□□□□ -0.86
CBX3-205ENST00000462165 GSTM5P46439 218 aa9.66□□□□□ -0.86
CBX3-205ENST00000462165 RAC1P63000 192 aa9.66□□□□□ -0.86
CBX3-205ENST00000462165 FAPQ12884 760 aa9.66□□□□□ -0.86
CBX3-205ENST00000462165 UAP1Q16222 522 aaPredicted RBP9.66□□□□□ -0.86
CBX3-205ENST00000462165 TSNAXIP1Q2TAA8 658 aa9.66□□□□□ -0.86
CBX3-205ENST00000462165 KRTAP24-1Q3LI83 254 aa9.66□□□□□ -0.86
CBX3-205ENST00000462165 SPIN4Q56A73 249 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms