RNA–Protein interactions for RNA: ENST00000462122.1

TRAF3IP1-204, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 922 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-204ENST00000462122 CYLC2Q14093 348 aaPredicted RBP10.65□□□□□ -0.7
TRAF3IP1-204ENST00000462122 GNA13Q14344 377 aa10.65□□□□□ -0.7
TRAF3IP1-204ENST00000462122 RGNQ15493 299 aa10.65□□□□□ -0.7
TRAF3IP1-204ENST00000462122 IGFBP7Q16270 282 aa10.65□□□□□ -0.7
TRAF3IP1-204ENST00000462122 TRMT5Q32P41 509 aaKnown RBP10.65□□□□□ -0.7
TRAF3IP1-204ENST00000462122 MMEL1Q495T6 779 aa10.65□□□□□ -0.7
TRAF3IP1-204ENST00000462122 CMPK2Q5EBM0 449 aa10.65□□□□□ -0.7
TRAF3IP1-204ENST00000462122 COX20Q5RI15 118 aa10.65□□□□□ -0.7
TRAF3IP1-204ENST00000462122 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.65□□□□□ -0.7
TRAF3IP1-204ENST00000462122 FNDC7Q5VTL7 733 aa10.65□□□□□ -0.7
TRAF3IP1-204ENST00000462122 AP1ARQ63HQ0 302 aa10.65□□□□□ -0.7
TRAF3IP1-204ENST00000462122 GFRALQ6UXV0 394 aa10.65□□□□□ -0.7
TRAF3IP1-204ENST00000462122 DLEU7Q6UYE1 221 aa10.65□□□□□ -0.7
TRAF3IP1-204ENST00000462122 ZAR1Q86SH2 424 aa10.65□□□□□ -0.7
TRAF3IP1-204ENST00000462122 GALNT10Q86SR1 603 aa10.65□□□□□ -0.7
TRAF3IP1-204ENST00000462122 MTDHQ86UE4 582 aaKnown RBP10.65□□□□□ -0.7
TRAF3IP1-204ENST00000462122 RETREG3Q86VR2 466 aa10.65□□□□□ -0.7
TRAF3IP1-204ENST00000462122 PLCZ1Q86YW0 608 aa10.65□□□□□ -0.7
TRAF3IP1-204ENST00000462122 MSRB3Q8IXL7 192 aa10.65□□□□□ -0.7
TRAF3IP1-204ENST00000462122 OR4C3Q8NH37 302 aa10.65□□□□□ -0.7
TRAF3IP1-204ENST00000462122 RP9Q8TA86 221 aaKnown RBP10.65□□□□□ -0.7
TRAF3IP1-204ENST00000462122 ROPN1LQ96C74 230 aa10.65□□□□□ -0.7
TRAF3IP1-204ENST00000462122 TRNT1Q96Q11 434 aaKnown RBP10.65□□□□□ -0.7
TRAF3IP1-204ENST00000462122 TSPAN10Q9H1Z9 355 aaPredicted RBP10.65□□□□□ -0.7
TRAF3IP1-204ENST00000462122 UBQLN3Q9H347 655 aa10.65□□□□□ -0.7
TRAF3IP1-204ENST00000462122 FBXO34Q9NWN3 711 aa10.65□□□□□ -0.7
TRAF3IP1-204ENST00000462122 SLC25A37Q9NYZ2 338 aa10.65□□□□□ -0.7
TRAF3IP1-204ENST00000462122 FLRT3Q9NZU0 649 aa10.65□□□□□ -0.7
TRAF3IP1-204ENST00000462122 VAPAQ9P0L0 249 aa10.65□□□□□ -0.7
TRAF3IP1-204ENST00000462122 SLAMF8Q9P0V8 285 aa10.65□□□□□ -0.7
TRAF3IP1-204ENST00000462122 PPP4R1LQ9P1A2 415 aa10.65□□□□□ -0.7
TRAF3IP1-204ENST00000462122 ARMCX1Q9P291 453 aa10.65□□□□□ -0.7
TRAF3IP1-204ENST00000462122 P2RX2Q9UBL9 471 aa10.65□□□□□ -0.7
TRAF3IP1-204ENST00000462122 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.65□□□□□ -0.7
TRAF3IP1-204ENST00000462122 NPIPA1Q9UND3 350 aa10.65□□□□□ -0.7
TRAF3IP1-204ENST00000462122 ARL2BPQ9Y2Y0 163 aa10.65□□□□□ -0.7
TRAF3IP1-204ENST00000462122 NUP214P35658 2090 aaPredicted RBP10.65□□□□□ -0.7
TRAF3IP1-204ENST00000462122 NPIPB9F8W1W9 429 aa10.64□□□□□ -0.71
TRAF3IP1-204ENST00000462122 H3BNH8 94 aa10.64□□□□□ -0.71
TRAF3IP1-204ENST00000462122 GNB5O14775 395 aa10.64□□□□□ -0.71
TRAF3IP1-204ENST00000462122 NDUFB5O43674 189 aa10.64□□□□□ -0.71
TRAF3IP1-204ENST00000462122 KIAA0513O60268 411 aa10.64□□□□□ -0.71
TRAF3IP1-204ENST00000462122 DCTN3O75935 186 aa10.64□□□□□ -0.71
TRAF3IP1-204ENST00000462122 UNC5CO95185 931 aa10.64□□□□□ -0.71
TRAF3IP1-204ENST00000462122 ANGPTL1O95841 491 aa10.64□□□□□ -0.71
TRAF3IP1-204ENST00000462122 NPPAP01160 153 aa10.64□□□□□ -0.71
TRAF3IP1-204ENST00000462122 IGHG3P01860 377 aa10.64□□□□□ -0.71
TRAF3IP1-204ENST00000462122 C1QCP02747 245 aa10.64□□□□□ -0.71
TRAF3IP1-204ENST00000462122 RFPL3SP0C7P2 107 aa10.64□□□□□ -0.71
TRAF3IP1-204ENST00000462122 ETFAP13804 333 aa10.64□□□□□ -0.71
TRAF3IP1-204ENST00000462122 ENDOUP21128 410 aaKnown RBP10.64□□□□□ -0.71
TRAF3IP1-204ENST00000462122 GDF1P27539 372 aa10.64□□□□□ -0.71
TRAF3IP1-204ENST00000462122 ATP12AP54707 1039 aa10.64□□□□□ -0.71
TRAF3IP1-204ENST00000462122 DSTNP60981 165 aa10.64□□□□□ -0.71
TRAF3IP1-204ENST00000462122 C17orf67Q0P5P2 114 aa10.64□□□□□ -0.71
TRAF3IP1-204ENST00000462122 FUT5Q11128 374 aa10.64□□□□□ -0.71
TRAF3IP1-204ENST00000462122 SLC10A1Q14973 349 aa10.64□□□□□ -0.71
TRAF3IP1-204ENST00000462122 GPAT3Q53EU6 434 aa10.64□□□□□ -0.71
TRAF3IP1-204ENST00000462122 GKAP1Q5VSY0 366 aaPredicted RBP10.64□□□□□ -0.71
TRAF3IP1-204ENST00000462122 REP15Q6BDI9 236 aa10.64□□□□□ -0.71
TRAF3IP1-204ENST00000462122 ARHGAP11AQ6P4F7 1023 aa10.64□□□□□ -0.71
TRAF3IP1-204ENST00000462122 LRRC74BQ6ZQY2 392 aa10.64□□□□□ -0.71
TRAF3IP1-204ENST00000462122 MTERF4Q7Z6M4 381 aaKnown RBP10.64□□□□□ -0.71
TRAF3IP1-204ENST00000462122 MARCH3Q86UD3 253 aa10.64□□□□□ -0.71
TRAF3IP1-204ENST00000462122 SNX32Q86XE0 403 aa10.64□□□□□ -0.71
TRAF3IP1-204ENST00000462122 WDSUB1Q8N9V3 476 aa10.64□□□□□ -0.71
TRAF3IP1-204ENST00000462122 PCYOX1LQ8NBM8 494 aa10.64□□□□□ -0.71
TRAF3IP1-204ENST00000462122 PMM1Q92871 262 aa10.64□□□□□ -0.71
TRAF3IP1-204ENST00000462122 GNRHR2Q96P88 292 aa10.64□□□□□ -0.71
TRAF3IP1-204ENST00000462122 CCT8L2Q96SF2 557 aa10.64□□□□□ -0.71
TRAF3IP1-204ENST00000462122 CGREF1Q99674 301 aa10.64□□□□□ -0.71
TRAF3IP1-204ENST00000462122 CCDC106Q9BWC9 280 aa10.64□□□□□ -0.71
TRAF3IP1-204ENST00000462122 SAP130Q9H0E3 1048 aa10.64□□□□□ -0.71
TRAF3IP1-204ENST00000462122 MYLK2Q9H1R3 596 aa10.64□□□□□ -0.71
TRAF3IP1-204ENST00000462122 ACKR4Q9NPB9 350 aa10.64□□□□□ -0.71
TRAF3IP1-204ENST00000462122 CALML5Q9NZT1 146 aa10.64□□□□□ -0.71
TRAF3IP1-204ENST00000462122 WDR45Q9Y484 360 aa10.64□□□□□ -0.71
TRAF3IP1-204ENST00000462122 RP1L1Q8IWN7 2480 aaPredicted RBP10.64□□□□□ -0.71
TRAF3IP1-204ENST00000462122 UBR5O95071 2799 aaPredicted RBP10.63□□□□□ -0.71
TRAF3IP1-204ENST00000462122 MYO18BQ8IUG5 2567 aa10.63□□□□□ -0.71
TRAF3IP1-204ENST00000462122 IGLV3-32A0A0A0MS00 114 aa10.63□□□□□ -0.71
TRAF3IP1-204ENST00000462122 LOC100653049A0A140TA62 436 aa10.63□□□□□ -0.71
TRAF3IP1-204ENST00000462122 C2orf72A6NCS6 295 aa10.63□□□□□ -0.71
TRAF3IP1-204ENST00000462122 FBP2O00757 339 aa10.63□□□□□ -0.71
TRAF3IP1-204ENST00000462122 ADAM10O14672 748 aa10.63□□□□□ -0.71
TRAF3IP1-204ENST00000462122 MRASO14807 208 aa10.63□□□□□ -0.71
TRAF3IP1-204ENST00000462122 SUSD5O60279 629 aa10.63□□□□□ -0.71
TRAF3IP1-204ENST00000462122 CDC40O60508 579 aaKnown RBP eCLIP10.63□□□□□ -0.71
TRAF3IP1-204ENST00000462122 FCMRO60667 390 aa10.63□□□□□ -0.71
TRAF3IP1-204ENST00000462122 HCN1O60741 890 aa10.63□□□□□ -0.71
TRAF3IP1-204ENST00000462122 KRT34O76011 436 aa10.63□□□□□ -0.71
TRAF3IP1-204ENST00000462122 H6PDO95479 791 aa10.63□□□□□ -0.71
TRAF3IP1-204ENST00000462122 HPNP05981 417 aa10.63□□□□□ -0.71
TRAF3IP1-204ENST00000462122 NR2F1P10589 423 aa10.63□□□□□ -0.71
TRAF3IP1-204ENST00000462122 BMP2P12643 396 aa10.63□□□□□ -0.71
TRAF3IP1-204ENST00000462122 GPX2P18283 190 aa10.63□□□□□ -0.71
TRAF3IP1-204ENST00000462122 MSX1P28360 303 aa10.63□□□□□ -0.71
TRAF3IP1-204ENST00000462122 CRISP3P54108 245 aa10.63□□□□□ -0.71
TRAF3IP1-204ENST00000462122 GPR68Q15743 365 aa10.63□□□□□ -0.71
TRAF3IP1-204ENST00000462122 ZNF141Q15928 474 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms