RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 CYLC2Q14093 348 aaPredicted RBP2.39□□□□□ -2.03
HDAC6-212ENST00000461608 ABRAXAS2Q15018 415 aa2.39□□□□□ -2.03
HDAC6-212ENST00000461608 SNAI3Q3KNW1 292 aa2.39□□□□□ -2.03
HDAC6-212ENST00000461608 CFAP157Q5JU67 520 aa2.39□□□□□ -2.03
HDAC6-212ENST00000461608 CELF3Q5SZQ8 465 aaKnown RBP2.39□□□□□ -2.03
HDAC6-212ENST00000461608 LCE1FQ5T754 118 aa2.39□□□□□ -2.03
HDAC6-212ENST00000461608 RNLSQ5VYX0 342 aa2.39□□□□□ -2.03
HDAC6-212ENST00000461608 NCR3LG1Q68D85 454 aa2.39□□□□□ -2.03
HDAC6-212ENST00000461608 ASPHD2Q6ICH7 369 aa2.39□□□□□ -2.03
HDAC6-212ENST00000461608 GALNT17Q6IS24 598 aa2.39□□□□□ -2.03
HDAC6-212ENST00000461608 ZNF343Q6P1L6 599 aa2.39□□□□□ -2.03
HDAC6-212ENST00000461608 C2orf66Q6UXQ4 117 aa2.39□□□□□ -2.03
HDAC6-212ENST00000461608 STAC2Q6ZMT1 411 aa2.39□□□□□ -2.03
HDAC6-212ENST00000461608 FAM43BQ6ZT52 329 aaPredicted RBP2.39□□□□□ -2.03
HDAC6-212ENST00000461608 ARMCX2Q7L311 632 aa2.39□□□□□ -2.03
HDAC6-212ENST00000461608 VASH2Q86V25 355 aa2.39□□□□□ -2.03
HDAC6-212ENST00000461608 KRTAP7-1Q8IUC3 87 aa2.39□□□□□ -2.03
HDAC6-212ENST00000461608 BPIFB2Q8N4F0 458 aa2.39□□□□□ -2.03
HDAC6-212ENST00000461608 CLDN19Q8N6F1 224 aa2.39□□□□□ -2.03
HDAC6-212ENST00000461608 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.39□□□□□ -2.03
HDAC6-212ENST00000461608 OR10A7Q8NGE5 316 aa2.39□□□□□ -2.03
HDAC6-212ENST00000461608 NANPQ8TBE9 248 aa2.39□□□□□ -2.03
HDAC6-212ENST00000461608 TRMT10AQ8TBZ6 339 aaKnown RBP2.39□□□□□ -2.03
HDAC6-212ENST00000461608 AGAP11Q8TF27 550 aa2.39□□□□□ -2.03
HDAC6-212ENST00000461608 TMEM80Q96HE8 168 aa2.39□□□□□ -2.03
HDAC6-212ENST00000461608 C4orf36Q96KX1 117 aa2.39□□□□□ -2.03
HDAC6-212ENST00000461608 SOSTQ9BQB4 213 aa2.39□□□□□ -2.03
HDAC6-212ENST00000461608 PUS3Q9BZE2 481 aaKnown RBP2.39□□□□□ -2.03
HDAC6-212ENST00000461608 ELOVL4Q9GZR5 314 aa2.39□□□□□ -2.03
HDAC6-212ENST00000461608 POLR3FQ9H1D9 316 aaPredicted RBP2.39□□□□□ -2.03
HDAC6-212ENST00000461608 CUTCQ9NTM9 273 aa2.39□□□□□ -2.03
HDAC6-212ENST00000461608 DPM3Q9P2X0 92 aa2.39□□□□□ -2.03
HDAC6-212ENST00000461608 RNF14Q9UBS8 474 aa2.39□□□□□ -2.03
HDAC6-212ENST00000461608 ANAPC7Q9UJX3 599 aa2.39□□□□□ -2.03
HDAC6-212ENST00000461608 WDR45Q9Y484 360 aa2.39□□□□□ -2.03
HDAC6-212ENST00000461608 CACNA1FO60840 1977 aa2.39□□□□□ -2.03
HDAC6-212ENST00000461608 SYNJ2BP-COX16A0A087WUM0 186 aa2.38□□□□□ -2.03
HDAC6-212ENST00000461608 C15orf38-AP3S2A0A0A6YYH1 394 aa2.38□□□□□ -2.03
HDAC6-212ENST00000461608 A0A1B0GU03 582 aa2.38□□□□□ -2.03
HDAC6-212ENST00000461608 ZNF840PA6NDX5 716 aa2.38□□□□□ -2.03
HDAC6-212ENST00000461608 B4DXG7 233 aa2.38□□□□□ -2.03
HDAC6-212ENST00000461608 GPR89AB7ZAQ6 455 aa2.38□□□□□ -2.03
HDAC6-212ENST00000461608 NPIPA7E9PJI5 369 aa2.38□□□□□ -2.03
HDAC6-212ENST00000461608 K7EQM0 130 aa2.38□□□□□ -2.03
HDAC6-212ENST00000461608 XPO1O14980 1071 aaKnown RBP2.38□□□□□ -2.03
HDAC6-212ENST00000461608 ZSCAN12O43309 604 aa2.38□□□□□ -2.03
HDAC6-212ENST00000461608 SPAG6O75602 509 aa2.38□□□□□ -2.03
HDAC6-212ENST00000461608 RHBDL1O75783 438 aa2.38□□□□□ -2.03
HDAC6-212ENST00000461608 SCGNO76038 276 aa2.38□□□□□ -2.03
HDAC6-212ENST00000461608 KIAA0754O94854 1291 aa2.38□□□□□ -2.03
HDAC6-212ENST00000461608 UFL1O94874 794 aa2.38□□□□□ -2.03
HDAC6-212ENST00000461608 PIGRP01833 764 aa2.38□□□□□ -2.03
HDAC6-212ENST00000461608 CD55P08174 381 aa2.38□□□□□ -2.03
HDAC6-212ENST00000461608 H2BFMP0C1H6 154 aa2.38□□□□□ -2.03
HDAC6-212ENST00000461608 GPR89BP0CG08 455 aa2.38□□□□□ -2.03
HDAC6-212ENST00000461608 NPIPA8P0DM63 369 aa2.38□□□□□ -2.03
HDAC6-212ENST00000461608 DBTP11182 482 aaKnown RBP2.38□□□□□ -2.03
HDAC6-212ENST00000461608 ATP6V1C1P21283 382 aa2.38□□□□□ -2.03
HDAC6-212ENST00000461608 DRD5P21918 477 aa2.38□□□□□ -2.03
HDAC6-212ENST00000461608 USP6P35125 1406 aa2.38□□□□□ -2.03
HDAC6-212ENST00000461608 ACVR1BP36896 505 aa2.38□□□□□ -2.03
HDAC6-212ENST00000461608 DLSTP36957 453 aa2.38□□□□□ -2.03
HDAC6-212ENST00000461608 XCR1P46094 333 aa2.38□□□□□ -2.03
HDAC6-212ENST00000461608 OR1D4P47884 311 aa2.38□□□□□ -2.03
HDAC6-212ENST00000461608 HNMTP50135 292 aa2.38□□□□□ -2.03
HDAC6-212ENST00000461608 EFNA3P52797 238 aa2.38□□□□□ -2.03
HDAC6-212ENST00000461608 HMGCS2P54868 508 aa2.38□□□□□ -2.03
HDAC6-212ENST00000461608 NUCB2P80303 420 aa2.38□□□□□ -2.03
HDAC6-212ENST00000461608 RGS1Q08116 209 aa2.38□□□□□ -2.03
HDAC6-212ENST00000461608 SELPLGQ14242 412 aa2.38□□□□□ -2.03
HDAC6-212ENST00000461608 SLC10A1Q14973 349 aa2.38□□□□□ -2.03
HDAC6-212ENST00000461608 TEX44Q53QW1 395 aa2.38□□□□□ -2.03
HDAC6-212ENST00000461608 ZNF772Q68DY9 489 aaPredicted RBP2.38□□□□□ -2.03
HDAC6-212ENST00000461608 LEMD1Q68G75 181 aa2.38□□□□□ -2.03
HDAC6-212ENST00000461608 PVRIGQ6DKI7 326 aa2.38□□□□□ -2.03
HDAC6-212ENST00000461608 FAHD2BQ6P2I3 314 aaPredicted RBP2.38□□□□□ -2.03
HDAC6-212ENST00000461608 BLOC1S2Q6QNY1 142 aa2.38□□□□□ -2.03
HDAC6-212ENST00000461608 BAIAP2L2Q6UXY1 529 aa2.38□□□□□ -2.03
HDAC6-212ENST00000461608 TIPARPQ7Z3E1 657 aaKnown RBP2.38□□□□□ -2.03
HDAC6-212ENST00000461608 TBC1D21Q8IYX1 336 aa2.38□□□□□ -2.03
HDAC6-212ENST00000461608 ZNF683Q8IZ20 524 aa2.38□□□□□ -2.03
HDAC6-212ENST00000461608 DHRSXQ8N5I4 330 aa2.38□□□□□ -2.03
HDAC6-212ENST00000461608 SUMF1Q8NBK3 374 aa2.38□□□□□ -2.03
HDAC6-212ENST00000461608 ZNF485Q8NCK3 441 aa2.38□□□□□ -2.03
HDAC6-212ENST00000461608 STEAP2Q8NFT2 490 aa2.38□□□□□ -2.03
HDAC6-212ENST00000461608 IPMKQ8NFU5 416 aa2.38□□□□□ -2.03
HDAC6-212ENST00000461608 PNPT1Q8TCS8 783 aaKnown RBP2.38□□□□□ -2.03
HDAC6-212ENST00000461608 SNED1Q8TER0 1413 aa2.38□□□□□ -2.03
HDAC6-212ENST00000461608 FAM222BQ8WU58 562 aa2.38□□□□□ -2.03
HDAC6-212ENST00000461608 SLC5A11Q8WWX8 675 aa2.38□□□□□ -2.03
HDAC6-212ENST00000461608 FAHD2AQ96GK7 314 aa2.38□□□□□ -2.03
HDAC6-212ENST00000461608 DHTKD1Q96HY7 919 aaPredicted RBP2.38□□□□□ -2.03
HDAC6-212ENST00000461608 PIWIL1Q96J94 861 aaKnown RBP2.38□□□□□ -2.03
HDAC6-212ENST00000461608 C7orf34Q96L11 122 aa2.38□□□□□ -2.03
HDAC6-212ENST00000461608 MCCC1Q96RQ3 725 aaPredicted RBP2.38□□□□□ -2.03
HDAC6-212ENST00000461608 ZNF607Q96SK3 696 aa2.38□□□□□ -2.03
HDAC6-212ENST00000461608 APOL2Q9BQE5 337 aa2.38□□□□□ -2.03
HDAC6-212ENST00000461608 TUBGCP2Q9BSJ2 902 aa2.38□□□□□ -2.03
HDAC6-212ENST00000461608 CRNKL1Q9BZJ0 848 aaKnown RBP2.38□□□□□ -2.03
HDAC6-212ENST00000461608 GLT8D2Q9H1C3 349 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms