RNA–Protein interactions for RNA: ENST00000461219.5

SCAF8-204, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 5

Gene SCAF8, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-204ENST00000461219 UFM1P61960 85 aa18.65■□□□□ 0.58
SCAF8-204ENST00000461219 C17orf67Q0P5P2 114 aa18.65■□□□□ 0.58
SCAF8-204ENST00000461219 RCAN2Q14206 197 aa18.65■□□□□ 0.58
SCAF8-204ENST00000461219 SPANXN4Q5MJ08 99 aa18.65■□□□□ 0.58
SCAF8-204ENST00000461219 CCNJQ5T5M9 372 aa18.65■□□□□ 0.58
SCAF8-204ENST00000461219 ULK2Q8IYT8 1036 aa18.65■□□□□ 0.58
SCAF8-204ENST00000461219 RPRMLQ8N4K4 120 aa18.65■□□□□ 0.58
SCAF8-204ENST00000461219 MARVELD2Q8N4S9 558 aa18.65■□□□□ 0.58
SCAF8-204ENST00000461219 ZNF527Q8NB42 609 aa18.65■□□□□ 0.58
SCAF8-204ENST00000461219 DUSP19Q8WTR2 217 aa18.65■□□□□ 0.58
SCAF8-204ENST00000461219 TIMP4Q99727 224 aa18.65■□□□□ 0.58
SCAF8-204ENST00000461219 TTYH2Q9BSA4 534 aa18.65■□□□□ 0.58
SCAF8-204ENST00000461219 UGT2B28Q9BY64 529 aa18.65■□□□□ 0.58
SCAF8-204ENST00000461219 OR2B2Q9GZK3 357 aa18.65■□□□□ 0.58
SCAF8-204ENST00000461219 MED11Q9P086 117 aa18.65■□□□□ 0.58
SCAF8-204ENST00000461219 RNF6Q9Y252 685 aa18.65■□□□□ 0.58
SCAF8-204ENST00000461219 USH1CQ9Y6N9 552 aa18.65■□□□□ 0.58
SCAF8-204ENST00000461219 MED12Q93074 2177 aa18.65■□□□□ 0.58
SCAF8-204ENST00000461219 FAM90A27PA6NNH2 459 aa18.64■□□□□ 0.57
SCAF8-204ENST00000461219 H0Y3Z8 333 aa18.64■□□□□ 0.57
SCAF8-204ENST00000461219 IGKV1D-16P01601 117 aa18.64■□□□□ 0.57
SCAF8-204ENST00000461219 HK1P19367 917 aa18.64■□□□□ 0.57
SCAF8-204ENST00000461219 MATN1P21941 496 aa18.64■□□□□ 0.57
SCAF8-204ENST00000461219 LCN1P31025 176 aa18.64■□□□□ 0.57
SCAF8-204ENST00000461219 MAP3K8P41279 467 aa18.64■□□□□ 0.57
SCAF8-204ENST00000461219 GAS1P54826 345 aa18.64■□□□□ 0.57
SCAF8-204ENST00000461219 SRYQ05066 204 aa18.64■□□□□ 0.57
SCAF8-204ENST00000461219 GANABQ14697 944 aaKnown RBP18.64■□□□□ 0.57
SCAF8-204ENST00000461219 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.64■□□□□ 0.57
SCAF8-204ENST00000461219 SLC9B1Q4ZJI4 515 aa18.64■□□□□ 0.57
SCAF8-204ENST00000461219 RAET1LQ5VY80 246 aa18.64■□□□□ 0.57
SCAF8-204ENST00000461219 SP5Q6BEB4 398 aaPredicted RBP18.64■□□□□ 0.57
SCAF8-204ENST00000461219 VASNQ6EMK4 673 aa18.64■□□□□ 0.57
SCAF8-204ENST00000461219 C6orf120Q7Z4R8 191 aa18.64■□□□□ 0.57
SCAF8-204ENST00000461219 HOXB13Q92826 284 aaPredicted RBP18.64■□□□□ 0.57
SCAF8-204ENST00000461219 MARK4Q96L34 752 aa18.64■□□□□ 0.57
SCAF8-204ENST00000461219 C7orf26Q96N11 449 aa18.64■□□□□ 0.57
SCAF8-204ENST00000461219 OR52E6Q96RD3 313 aa18.64■□□□□ 0.57
SCAF8-204ENST00000461219 UBQLN4Q9NRR5 601 aa18.64■□□□□ 0.57
SCAF8-204ENST00000461219 GIN1Q9NXP7 522 aa18.64■□□□□ 0.57
SCAF8-204ENST00000461219 DUXAA6NLW8 204 aa18.63■□□□□ 0.57
SCAF8-204ENST00000461219 UBDO15205 165 aa18.63■□□□□ 0.57
SCAF8-204ENST00000461219 POLR3GO15318 223 aaPredicted RBP18.63■□□□□ 0.57
SCAF8-204ENST00000461219 OXSR1O95747 527 aaPredicted RBP18.63■□□□□ 0.57
SCAF8-204ENST00000461219 GLI4P10075 376 aa18.63■□□□□ 0.57
SCAF8-204ENST00000461219 UQCRC2P22695 453 aa18.63■□□□□ 0.57
SCAF8-204ENST00000461219 DCTP40126 519 aa18.63■□□□□ 0.57
SCAF8-204ENST00000461219 STX1BP61266 288 aa18.63■□□□□ 0.57
SCAF8-204ENST00000461219 ZNF630Q2M218 657 aaPredicted RBP18.63■□□□□ 0.57
SCAF8-204ENST00000461219 NHSL2Q5HYW2 709 aa18.63■□□□□ 0.57
SCAF8-204ENST00000461219 DCST2Q5T1A1 773 aa18.63■□□□□ 0.57
SCAF8-204ENST00000461219 ZNF787Q6DD87 383 aa18.63■□□□□ 0.57
SCAF8-204ENST00000461219 CHMP1BQ7LBR1 199 aa18.63■□□□□ 0.57
SCAF8-204ENST00000461219 C16orf62Q7Z3J2 963 aa18.63■□□□□ 0.57
SCAF8-204ENST00000461219 CCDC71Q8IV32 467 aaPredicted RBP18.63■□□□□ 0.57
SCAF8-204ENST00000461219 TRIML2Q8N7C3 387 aa18.63■□□□□ 0.57
SCAF8-204ENST00000461219 ZNF614Q8N883 585 aa18.63■□□□□ 0.57
SCAF8-204ENST00000461219 GATSQ8NAP1 163 aa18.63■□□□□ 0.57
SCAF8-204ENST00000461219 GLB1L3Q8NCI6 653 aaPredicted RBP18.63■□□□□ 0.57
SCAF8-204ENST00000461219 OR2M3Q8NG83 312 aa18.63■□□□□ 0.57
SCAF8-204ENST00000461219 ACTRT2Q8TDY3 377 aa18.63■□□□□ 0.57
SCAF8-204ENST00000461219 NTNG2Q96CW9 530 aa18.63■□□□□ 0.57
SCAF8-204ENST00000461219 OR7D2Q96RA2 312 aa18.63■□□□□ 0.57
SCAF8-204ENST00000461219 TRIB1Q96RU8 372 aa18.63■□□□□ 0.57
SCAF8-204ENST00000461219 GPATCH2Q9NW75 528 aa18.63■□□□□ 0.57
SCAF8-204ENST00000461219 FAM215AQ9Y5M1 114 aa18.63■□□□□ 0.57
SCAF8-204ENST00000461219 C9JVG2 144 aa18.62■□□□□ 0.57
SCAF8-204ENST00000461219 H3BNH8 94 aa18.62■□□□□ 0.57
SCAF8-204ENST00000461219 TBXA2RP21731 343 aa18.62■□□□□ 0.57
SCAF8-204ENST00000461219 ZFP36L2P47974 494 aaKnown RBP18.62■□□□□ 0.57
SCAF8-204ENST00000461219 RPS26P62854 115 aaKnown RBP18.62■□□□□ 0.57
SCAF8-204ENST00000461219 LRRC74AQ0VAA2 488 aa18.62■□□□□ 0.57
SCAF8-204ENST00000461219 GSTA3Q16772 222 aa18.62■□□□□ 0.57
SCAF8-204ENST00000461219 ATAD3BQ5T9A4 648 aa18.62■□□□□ 0.57
SCAF8-204ENST00000461219 CLEC4FQ8N1N0 589 aa18.62■□□□□ 0.57
SCAF8-204ENST00000461219 OR5D16Q8NGK9 328 aa18.62■□□□□ 0.57
SCAF8-204ENST00000461219 RNF138Q8WVD3 245 aa18.62■□□□□ 0.57
SCAF8-204ENST00000461219 PANX1Q96RD7 426 aa18.62■□□□□ 0.57
SCAF8-204ENST00000461219 HOXD1Q9GZZ0 328 aa18.62■□□□□ 0.57
SCAF8-204ENST00000461219 KCNJ16Q9NPI9 418 aa18.62■□□□□ 0.57
SCAF8-204ENST00000461219 EXD2Q9NVH0 621 aa18.62■□□□□ 0.57
SCAF8-204ENST00000461219 MRPS18CQ9Y3D5 142 aaKnown RBP18.62■□□□□ 0.57
SCAF8-204ENST00000461219 GPR45Q9Y5Y3 372 aa18.62■□□□□ 0.57
SCAF8-204ENST00000461219 CACNA1DQ01668 2161 aa18.62■□□□□ 0.57
SCAF8-204ENST00000461219 DOCK7Q96N67 2140 aa18.61■□□□□ 0.57
SCAF8-204ENST00000461219 HCFC1P51610 2035 aa18.61■□□□□ 0.57
SCAF8-204ENST00000461219 ANKRD28O15084 1053 aa18.61■□□□□ 0.57
SCAF8-204ENST00000461219 HNRNPRO43390 633 aaKnown RBP18.61■□□□□ 0.57
SCAF8-204ENST00000461219 SLC22A3O75751 556 aa18.61■□□□□ 0.57
SCAF8-204ENST00000461219 AGR2O95994 175 aa18.61■□□□□ 0.57
SCAF8-204ENST00000461219 IL2RAP01589 272 aa18.61■□□□□ 0.57
SCAF8-204ENST00000461219 PGRP06401 933 aa18.61■□□□□ 0.57
SCAF8-204ENST00000461219 NGFRP08138 427 aa18.61■□□□□ 0.57
SCAF8-204ENST00000461219 COX6B1P14854 86 aa18.61■□□□□ 0.57
SCAF8-204ENST00000461219 DGKQP52824 942 aa18.61■□□□□ 0.57
SCAF8-204ENST00000461219 WNT3P56703 355 aa18.61■□□□□ 0.57
SCAF8-204ENST00000461219 ACSF3Q4G176 576 aaPredicted RBP18.61■□□□□ 0.57
SCAF8-204ENST00000461219 FLYWCH1Q4VC44 716 aa18.61■□□□□ 0.57
SCAF8-204ENST00000461219 PDCD4Q53EL6 469 aaKnown RBP18.61■□□□□ 0.57
SCAF8-204ENST00000461219 RTL6Q6ICC9 239 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms