RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 PRF1P14222 555 aa12.09□□□□□ -0.47
RAB11FIP3-207ENST00000461009 GABRA1P14867 456 aa12.09□□□□□ -0.47
RAB11FIP3-207ENST00000461009 ATP6V1C1P21283 382 aa12.09□□□□□ -0.47
RAB11FIP3-207ENST00000461009 ACVR2AP27037 513 aa12.09□□□□□ -0.47
RAB11FIP3-207ENST00000461009 CHI3L1P36222 383 aaPredicted RBP12.09□□□□□ -0.47
RAB11FIP3-207ENST00000461009 RFX3P48380 749 aa12.09□□□□□ -0.47
RAB11FIP3-207ENST00000461009 ANXA11P50995 505 aaKnown RBP12.09□□□□□ -0.47
RAB11FIP3-207ENST00000461009 ARFIP2P53365 341 aa12.09□□□□□ -0.47
RAB11FIP3-207ENST00000461009 TXNL4AP83876 142 aaKnown RBP12.09□□□□□ -0.47
RAB11FIP3-207ENST00000461009 SQLEQ14534 574 aa12.09□□□□□ -0.47
RAB11FIP3-207ENST00000461009 DUSP5Q16690 384 aa12.09□□□□□ -0.47
RAB11FIP3-207ENST00000461009 CRYBG3Q68DQ2 2970 aa12.09□□□□□ -0.47
RAB11FIP3-207ENST00000461009 BICRALQ6AI39 1079 aa12.09□□□□□ -0.47
RAB11FIP3-207ENST00000461009 TIGD3Q6B0B8 471 aa12.09□□□□□ -0.47
RAB11FIP3-207ENST00000461009 B3GNT6Q6ZMB0 384 aa12.09□□□□□ -0.47
RAB11FIP3-207ENST00000461009 ZNF621Q6ZSS3 439 aa12.09□□□□□ -0.47
RAB11FIP3-207ENST00000461009 NCCRP1Q6ZVX7 275 aaPredicted RBP12.09□□□□□ -0.47
RAB11FIP3-207ENST00000461009 OR5M9Q8NGP3 310 aa12.09□□□□□ -0.47
RAB11FIP3-207ENST00000461009 OR5AK3PQ8NH89 298 aa12.09□□□□□ -0.47
RAB11FIP3-207ENST00000461009 LILRB4Q8NHJ6 448 aa12.09□□□□□ -0.47
RAB11FIP3-207ENST00000461009 RFWD2Q8NHY2 731 aa12.09□□□□□ -0.47
RAB11FIP3-207ENST00000461009 FAM110BQ8TC76 370 aa12.09□□□□□ -0.47
RAB11FIP3-207ENST00000461009 PIK3R3Q92569 461 aa12.09□□□□□ -0.47
RAB11FIP3-207ENST00000461009 ITCHQ96J02 903 aa12.09□□□□□ -0.47
RAB11FIP3-207ENST00000461009 SLC35G5Q96KT7 338 aa12.09□□□□□ -0.47
RAB11FIP3-207ENST00000461009 SLC24A3Q9HC58 644 aa12.09□□□□□ -0.47
RAB11FIP3-207ENST00000461009 EXD2Q9NVH0 621 aa12.09□□□□□ -0.47
RAB11FIP3-207ENST00000461009 FGFR1OP2Q9NVK5 253 aa12.09□□□□□ -0.47
RAB11FIP3-207ENST00000461009 GPATCH2Q9NW75 528 aa12.09□□□□□ -0.47
RAB11FIP3-207ENST00000461009 ALKBH4Q9NXW9 302 aa12.09□□□□□ -0.47
RAB11FIP3-207ENST00000461009 ABCG2Q9UNQ0 655 aa12.09□□□□□ -0.47
RAB11FIP3-207ENST00000461009 ZNF407Q9C0G0 2248 aa12.09□□□□□ -0.47
RAB11FIP3-207ENST00000461009 CELSR2Q9HCU4 2923 aa12.08□□□□□ -0.48
RAB11FIP3-207ENST00000461009 NCOA6Q14686 2063 aaPredicted RBP12.08□□□□□ -0.48
RAB11FIP3-207ENST00000461009 CCDC154A6NI56 674 aa12.08□□□□□ -0.48
RAB11FIP3-207ENST00000461009 C9JVG2 144 aa12.08□□□□□ -0.48
RAB11FIP3-207ENST00000461009 KCNK2O95069 426 aa12.08□□□□□ -0.48
RAB11FIP3-207ENST00000461009 UTS2O95399 124 aa12.08□□□□□ -0.48
RAB11FIP3-207ENST00000461009 ANP32DO95626 131 aa12.08□□□□□ -0.48
RAB11FIP3-207ENST00000461009 KRT75O95678 551 aa12.08□□□□□ -0.48
RAB11FIP3-207ENST00000461009 AK1P00568 194 aa12.08□□□□□ -0.48
RAB11FIP3-207ENST00000461009 HPGDP15428 266 aa12.08□□□□□ -0.48
RAB11FIP3-207ENST00000461009 GDF1P27539 372 aa12.08□□□□□ -0.48
RAB11FIP3-207ENST00000461009 EVI2BP34910 448 aa12.08□□□□□ -0.48
RAB11FIP3-207ENST00000461009 TRPC1P48995 793 aa12.08□□□□□ -0.48
RAB11FIP3-207ENST00000461009 SF3B4Q15427 424 aaKnown RBP eCLIP12.08□□□□□ -0.48
RAB11FIP3-207ENST00000461009 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.08□□□□□ -0.48
RAB11FIP3-207ENST00000461009 EXOSC6Q5RKV6 272 aaKnown RBP12.08□□□□□ -0.48
RAB11FIP3-207ENST00000461009 ATAD3BQ5T9A4 648 aa12.08□□□□□ -0.48
RAB11FIP3-207ENST00000461009 ANGPTL8Q6UXH0 198 aa12.08□□□□□ -0.48
RAB11FIP3-207ENST00000461009 MEX3BQ6ZN04 569 aaKnown RBP12.08□□□□□ -0.48
RAB11FIP3-207ENST00000461009 FBXO30Q8TB52 745 aa12.08□□□□□ -0.48
RAB11FIP3-207ENST00000461009 NEURL3Q96EH8 262 aa12.08□□□□□ -0.48
RAB11FIP3-207ENST00000461009 SLC35A5Q9BS91 424 aa12.08□□□□□ -0.48
RAB11FIP3-207ENST00000461009 TBL1XR1Q9BZK7 514 aa12.08□□□□□ -0.48
RAB11FIP3-207ENST00000461009 HOXD1Q9GZZ0 328 aa12.08□□□□□ -0.48
RAB11FIP3-207ENST00000461009 PNPLA3Q9NST1 481 aa12.08□□□□□ -0.48
RAB11FIP3-207ENST00000461009 CCDC167Q9P0B6 97 aa12.08□□□□□ -0.48
RAB11FIP3-207ENST00000461009 RNF6Q9Y252 685 aa12.08□□□□□ -0.48
RAB11FIP3-207ENST00000461009 CENPEQ02224 2701 aa12.08□□□□□ -0.48
RAB11FIP3-207ENST00000461009 GNB5O14775 395 aa12.07□□□□□ -0.48
RAB11FIP3-207ENST00000461009 SNPHO15079 494 aa12.07□□□□□ -0.48
RAB11FIP3-207ENST00000461009 CBR3O75828 277 aa12.07□□□□□ -0.48
RAB11FIP3-207ENST00000461009 TRAPPC6AO75865 159 aa12.07□□□□□ -0.48
RAB11FIP3-207ENST00000461009 CAPN3P20807 821 aa12.07□□□□□ -0.48
RAB11FIP3-207ENST00000461009 GCKP35557 465 aa12.07□□□□□ -0.48
RAB11FIP3-207ENST00000461009 TOMM20Q15388 145 aa12.07□□□□□ -0.48
RAB11FIP3-207ENST00000461009 AGKQ53H12 422 aa12.07□□□□□ -0.48
RAB11FIP3-207ENST00000461009 SAXO2Q658L1 398 aa12.07□□□□□ -0.48
RAB11FIP3-207ENST00000461009 DESI1Q6ICB0 168 aa12.07□□□□□ -0.48
RAB11FIP3-207ENST00000461009 FIGNL1Q6PIW4 674 aa12.07□□□□□ -0.48
RAB11FIP3-207ENST00000461009 BLOC1S3Q6QNY0 202 aa12.07□□□□□ -0.48
RAB11FIP3-207ENST00000461009 OR9I1Q8NGQ6 314 aa12.07□□□□□ -0.48
RAB11FIP3-207ENST00000461009 MIPOL1Q8TD10 442 aa12.07□□□□□ -0.48
RAB11FIP3-207ENST00000461009 CDS1Q92903 461 aa12.07□□□□□ -0.48
RAB11FIP3-207ENST00000461009 NTNG2Q96CW9 530 aa12.07□□□□□ -0.48
RAB11FIP3-207ENST00000461009 OR7D2Q96RA2 312 aa12.07□□□□□ -0.48
RAB11FIP3-207ENST00000461009 TMEM120AQ9BXJ8 343 aa12.07□□□□□ -0.48
RAB11FIP3-207ENST00000461009 ACKR4Q9NPB9 350 aa12.07□□□□□ -0.48
RAB11FIP3-207ENST00000461009 UBQLN4Q9NRR5 601 aa12.07□□□□□ -0.48
RAB11FIP3-207ENST00000461009 WIF1Q9Y5W5 379 aa12.07□□□□□ -0.48
RAB11FIP3-207ENST00000461009 CREBBPQ92793 2442 aa12.07□□□□□ -0.48
RAB11FIP3-207ENST00000461009 C2orf72A6NCS6 295 aa12.06□□□□□ -0.48
RAB11FIP3-207ENST00000461009 LRRC3CA6NJW4 275 aa12.06□□□□□ -0.48
RAB11FIP3-207ENST00000461009 FAM90A27PA6NNH2 459 aa12.06□□□□□ -0.48
RAB11FIP3-207ENST00000461009 C19orf84I3L1E1 186 aa12.06□□□□□ -0.48
RAB11FIP3-207ENST00000461009 FADS1O60427 444 aa12.06□□□□□ -0.48
RAB11FIP3-207ENST00000461009 IGKV1D-16P01601 117 aa12.06□□□□□ -0.48
RAB11FIP3-207ENST00000461009 NGFRP08138 427 aa12.06□□□□□ -0.48
RAB11FIP3-207ENST00000461009 RFPL3SP0C7P2 107 aa12.06□□□□□ -0.48
RAB11FIP3-207ENST00000461009 ZCCHC18P0CG32 403 aa12.06□□□□□ -0.48
RAB11FIP3-207ENST00000461009 TBXA2RP21731 343 aa12.06□□□□□ -0.48
RAB11FIP3-207ENST00000461009 PTGDSP41222 190 aa12.06□□□□□ -0.48
RAB11FIP3-207ENST00000461009 MAGEA8P43361 318 aa12.06□□□□□ -0.48
RAB11FIP3-207ENST00000461009 ZFP36L2P47974 494 aaKnown RBP12.06□□□□□ -0.48
RAB11FIP3-207ENST00000461009 KHKP50053 298 aa12.06□□□□□ -0.48
RAB11FIP3-207ENST00000461009 NUP107P57740 925 aa12.06□□□□□ -0.48
RAB11FIP3-207ENST00000461009 C17orf67Q0P5P2 114 aa12.06□□□□□ -0.48
RAB11FIP3-207ENST00000461009 CDSNQ15517 529 aa12.06□□□□□ -0.48
RAB11FIP3-207ENST00000461009 TIGD2Q4W5G0 525 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms