RNA–Protein interactions for RNA: ENST00000460739.5

SOX2-OT-201, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 609 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-201ENST00000460739 EXOSC6Q5RKV6 272 aaKnown RBP10.66□□□□□ -0.7
SOX2-OT-201ENST00000460739 RAET1LQ5VY80 246 aa10.66□□□□□ -0.7
SOX2-OT-201ENST00000460739 OR2A2Q6IF42 318 aa10.66□□□□□ -0.7
SOX2-OT-201ENST00000460739 MFSD12Q6NUT3 480 aa10.66□□□□□ -0.7
SOX2-OT-201ENST00000460739 EMBQ6PCB8 327 aa10.66□□□□□ -0.7
SOX2-OT-201ENST00000460739 ZCCHC12Q6PEW1 402 aa10.66□□□□□ -0.7
SOX2-OT-201ENST00000460739 LRIG3Q6UXM1 1119 aa10.66□□□□□ -0.7
SOX2-OT-201ENST00000460739 APOOLQ6UXV4 268 aa10.66□□□□□ -0.7
SOX2-OT-201ENST00000460739 ZCCHC23Q6ZST2 131 aa10.66□□□□□ -0.7
SOX2-OT-201ENST00000460739 R3HCC1LQ7Z5L2 792 aaKnown RBP10.66□□□□□ -0.7
SOX2-OT-201ENST00000460739 LUZP2Q86TE4 346 aa10.66□□□□□ -0.7
SOX2-OT-201ENST00000460739 EXOC3L1Q86VI1 746 aa10.66□□□□□ -0.7
SOX2-OT-201ENST00000460739 UBQLNLQ8IYU4 475 aa10.66□□□□□ -0.7
SOX2-OT-201ENST00000460739 MEIOBQ8N635 442 aa10.66□□□□□ -0.7
SOX2-OT-201ENST00000460739 LINC01560Q8TB33 94 aa10.66□□□□□ -0.7
SOX2-OT-201ENST00000460739 FAM110BQ8TC76 370 aa10.66□□□□□ -0.7
SOX2-OT-201ENST00000460739 SLC9A6Q92581 669 aa10.66□□□□□ -0.7
SOX2-OT-201ENST00000460739 RMND5BQ96G75 393 aaPredicted RBP10.66□□□□□ -0.7
SOX2-OT-201ENST00000460739 MS4A4EQ96PG1 132 aa10.66□□□□□ -0.7
SOX2-OT-201ENST00000460739 FOXC2Q99958 501 aa10.66□□□□□ -0.7
SOX2-OT-201ENST00000460739 PIGQQ9BRB3 760 aa10.66□□□□□ -0.7
SOX2-OT-201ENST00000460739 RBM24Q9BX46 236 aaKnown RBP10.66□□□□□ -0.7
SOX2-OT-201ENST00000460739 CXXC4Q9H2H0 198 aa10.66□□□□□ -0.7
SOX2-OT-201ENST00000460739 LIME1Q9H400 295 aa10.66□□□□□ -0.7
SOX2-OT-201ENST00000460739 HHATLQ9HCP6 504 aa10.66□□□□□ -0.7
SOX2-OT-201ENST00000460739 GALNT8Q9NY28 637 aa10.66□□□□□ -0.7
SOX2-OT-201ENST00000460739 ATP6V1HQ9UI12 483 aa10.66□□□□□ -0.7
SOX2-OT-201ENST00000460739 ST6GALNAC2Q9UJ37 374 aa10.66□□□□□ -0.7
SOX2-OT-201ENST00000460739 PACSIN3Q9UKS6 424 aa10.66□□□□□ -0.7
SOX2-OT-201ENST00000460739 SLC22A20A6NK97 555 aa10.65□□□□□ -0.7
SOX2-OT-201ENST00000460739 A8MXE2 369 aa10.65□□□□□ -0.7
SOX2-OT-201ENST00000460739 ALG1L2C9J202 215 aa10.65□□□□□ -0.7
SOX2-OT-201ENST00000460739 SCAMP2O15127 329 aaKnown RBP10.65□□□□□ -0.7
SOX2-OT-201ENST00000460739 TNFRSF21O75509 655 aa10.65□□□□□ -0.7
SOX2-OT-201ENST00000460739 ACP2P11117 423 aa10.65□□□□□ -0.7
SOX2-OT-201ENST00000460739 DDX5P17844 614 aaKnown RBP10.65□□□□□ -0.7
SOX2-OT-201ENST00000460739 TBXA2RP21731 343 aa10.65□□□□□ -0.7
SOX2-OT-201ENST00000460739 MAPK1P28482 360 aa10.65□□□□□ -0.7
SOX2-OT-201ENST00000460739 HPCAL1P37235 193 aa10.65□□□□□ -0.7
SOX2-OT-201ENST00000460739 RPL3P39023 403 aaKnown RBP10.65□□□□□ -0.7
SOX2-OT-201ENST00000460739 PCYT1AP49585 367 aa10.65□□□□□ -0.7
SOX2-OT-201ENST00000460739 SUCLG1P53597 346 aaKnown RBP10.65□□□□□ -0.7
SOX2-OT-201ENST00000460739 DIO3P55073 304 aa10.65□□□□□ -0.7
SOX2-OT-201ENST00000460739 OCRLQ01968 901 aa10.65□□□□□ -0.7
SOX2-OT-201ENST00000460739 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.65□□□□□ -0.7
SOX2-OT-201ENST00000460739 TMEM44Q2T9K0 475 aa10.65□□□□□ -0.7
SOX2-OT-201ENST00000460739 WDR93Q6P2C0 686 aa10.65□□□□□ -0.7
SOX2-OT-201ENST00000460739 CHMP1BQ7LBR1 199 aa10.65□□□□□ -0.7
SOX2-OT-201ENST00000460739 SLC16A11Q8NCK7 471 aa10.65□□□□□ -0.7
SOX2-OT-201ENST00000460739 OR6Y1Q8NGX8 325 aa10.65□□□□□ -0.7
SOX2-OT-201ENST00000460739 OR4C3Q8NH37 302 aa10.65□□□□□ -0.7
SOX2-OT-201ENST00000460739 CAVIN3Q969G5 261 aa10.65□□□□□ -0.7
SOX2-OT-201ENST00000460739 PPP3R2Q96LZ3 170 aa10.65□□□□□ -0.7
SOX2-OT-201ENST00000460739 TMEM109Q9BVC6 243 aa10.65□□□□□ -0.7
SOX2-OT-201ENST00000460739 SIRT3Q9NTG7 399 aaPredicted RBP10.65□□□□□ -0.7
SOX2-OT-201ENST00000460739 GIMAP2Q9UG22 337 aa10.65□□□□□ -0.7
SOX2-OT-201ENST00000460739 EDARQ9UNE0 448 aa10.65□□□□□ -0.7
SOX2-OT-201ENST00000460739 NF1P21359 2839 aa10.65□□□□□ -0.71
SOX2-OT-201ENST00000460739 H0YC42 278 aa10.64□□□□□ -0.71
SOX2-OT-201ENST00000460739 H3BML4 177 aa10.64□□□□□ -0.71
SOX2-OT-201ENST00000460739 MSTNO14793 375 aa10.64□□□□□ -0.71
SOX2-OT-201ENST00000460739 NDUFB5O43674 189 aa10.64□□□□□ -0.71
SOX2-OT-201ENST00000460739 TYROBPO43914 113 aa10.64□□□□□ -0.71
SOX2-OT-201ENST00000460739 PEX11AO75192 247 aa10.64□□□□□ -0.71
SOX2-OT-201ENST00000460739 KCNK2O95069 426 aa10.64□□□□□ -0.71
SOX2-OT-201ENST00000460739 OXSR1O95747 527 aaPredicted RBP10.64□□□□□ -0.71
SOX2-OT-201ENST00000460739 BPGMP07738 259 aa10.64□□□□□ -0.71
SOX2-OT-201ENST00000460739 CREB1P16220 341 aa10.64□□□□□ -0.71
SOX2-OT-201ENST00000460739 LCN1P31025 176 aa10.64□□□□□ -0.71
SOX2-OT-201ENST00000460739 ETV4P43268 484 aa10.64□□□□□ -0.71
SOX2-OT-201ENST00000460739 CPA2P48052 419 aa10.64□□□□□ -0.71
SOX2-OT-201ENST00000460739 SERPINB4P48594 390 aa10.64□□□□□ -0.71
SOX2-OT-201ENST00000460739 TPD52P55327 224 aaPredicted RBP10.64□□□□□ -0.71
SOX2-OT-201ENST00000460739 CLDN20P56880 219 aa10.64□□□□□ -0.71
SOX2-OT-201ENST00000460739 RIPPLY3P57055 190 aa10.64□□□□□ -0.71
SOX2-OT-201ENST00000460739 DUSP5Q16690 384 aa10.64□□□□□ -0.71
SOX2-OT-201ENST00000460739 ATP6AP1LQ52LC2 224 aa10.64□□□□□ -0.71
SOX2-OT-201ENST00000460739 C6orf136Q5SQH8 315 aa10.64□□□□□ -0.71
SOX2-OT-201ENST00000460739 SZRD1Q7Z422 152 aa10.64□□□□□ -0.71
SOX2-OT-201ENST00000460739 P4HA3Q7Z4N8 544 aa10.64□□□□□ -0.71
SOX2-OT-201ENST00000460739 GALNT10Q86SR1 603 aa10.64□□□□□ -0.71
SOX2-OT-201ENST00000460739 OR5M1Q8NGP8 315 aa10.64□□□□□ -0.71
SOX2-OT-201ENST00000460739 PSMA8Q8TAA3 256 aa10.64□□□□□ -0.71
SOX2-OT-201ENST00000460739 FBXO30Q8TB52 745 aa10.64□□□□□ -0.71
SOX2-OT-201ENST00000460739 AGR3Q8TD06 166 aa10.64□□□□□ -0.71
SOX2-OT-201ENST00000460739 FIG4Q92562 907 aa10.64□□□□□ -0.71
SOX2-OT-201ENST00000460739 STARD4Q96DR4 205 aa10.64□□□□□ -0.71
SOX2-OT-201ENST00000460739 FAM120BQ96EK7 910 aaKnown RBP10.64□□□□□ -0.71
SOX2-OT-201ENST00000460739 C16orf58Q96GQ5 468 aa10.64□□□□□ -0.71
SOX2-OT-201ENST00000460739 C3orf30Q96M34 536 aa10.64□□□□□ -0.71
SOX2-OT-201ENST00000460739 DACH2Q96NX9 599 aa10.64□□□□□ -0.71
SOX2-OT-201ENST00000460739 RNF122Q9H9V4 155 aa10.64□□□□□ -0.71
SOX2-OT-201ENST00000460739 CCM2LQ9NUG4 571 aaPredicted RBP10.64□□□□□ -0.71
SOX2-OT-201ENST00000460739 ZDHHC2Q9UIJ5 367 aa10.64□□□□□ -0.71
SOX2-OT-201ENST00000460739 ZNF175Q9Y473 711 aa10.64□□□□□ -0.71
SOX2-OT-201ENST00000460739 AP4B1Q9Y6B7 739 aa10.64□□□□□ -0.71
SOX2-OT-201ENST00000460739 ZNF469Q96JG9 3925 aaPredicted RBP10.63□□□□□ -0.71
SOX2-OT-201ENST00000460739 SETD2Q9BYW2 2564 aaPredicted RBP10.63□□□□□ -0.71
SOX2-OT-201ENST00000460739 A0A087WZY1 265 aa10.63□□□□□ -0.71
SOX2-OT-201ENST00000460739 A0A1W2PRB8 838 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms