RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 ESRRGP62508 458 aa9.71□□□□□ -0.86
HERC4-207ENST00000460168 SNRPNP63162 240 aaKnown RBP9.71□□□□□ -0.86
HERC4-207ENST00000460168 IKZF1Q13422 519 aa9.71□□□□□ -0.86
HERC4-207ENST00000460168 RGNQ15493 299 aa9.71□□□□□ -0.86
HERC4-207ENST00000460168 MTX3Q5HYI7 312 aa9.71□□□□□ -0.86
HERC4-207ENST00000460168 ZBTB37Q5TC79 503 aa9.71□□□□□ -0.86
HERC4-207ENST00000460168 RAB12Q6IQ22 244 aa9.71□□□□□ -0.86
HERC4-207ENST00000460168 LACC1Q8IV20 430 aa9.71□□□□□ -0.86
HERC4-207ENST00000460168 OR6F1Q8NGZ6 308 aa9.71□□□□□ -0.86
HERC4-207ENST00000460168 OR5P2Q8WZ92 322 aa9.71□□□□□ -0.86
HERC4-207ENST00000460168 SLCO4A1Q96BD0 722 aa9.71□□□□□ -0.86
HERC4-207ENST00000460168 DUS3LQ96G46 650 aaKnown RBP9.71□□□□□ -0.86
HERC4-207ENST00000460168 SEPHS2Q99611 448 aa9.71□□□□□ -0.86
HERC4-207ENST00000460168 PKP2Q99959 881 aa9.71□□□□□ -0.86
HERC4-207ENST00000460168 CCM2LQ9NUG4 571 aaPredicted RBP9.71□□□□□ -0.86
HERC4-207ENST00000460168 NLGN3Q9NZ94 848 aa9.71□□□□□ -0.86
HERC4-207ENST00000460168 RAPGEFL1Q9UHV5 662 aa9.71□□□□□ -0.86
HERC4-207ENST00000460168 PHF11Q9UIL8 331 aa9.71□□□□□ -0.86
HERC4-207ENST00000460168 ANAPC2Q9UJX6 822 aa9.71□□□□□ -0.86
HERC4-207ENST00000460168 RAB23Q9ULC3 237 aa9.71□□□□□ -0.86
HERC4-207ENST00000460168 IGHV1OR21-1A0A087WYE8 117 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 IGHV5-51A0A0C4DH38 117 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 RNF103-CHMP3A0A140T963 221 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 TCRBV5S2A0A599 114 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 LOC110117498-PIK3R3F6TDL0 507 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 CREG1O75629 220 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 KCNK5O95279 499 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 CNOT4O95628 575 aaKnown RBP9.7□□□□□ -0.86
HERC4-207ENST00000460168 LDOC1O95751 146 aaPredicted RBP9.7□□□□□ -0.86
HERC4-207ENST00000460168 SMIM10L1P0DMW3 83 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 UQCRC2P22695 453 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 CPN2P22792 545 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 S100PP25815 95 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 PEX2P28328 305 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 TLX1P31314 330 aaPredicted RBP9.7□□□□□ -0.86
HERC4-207ENST00000460168 CNR2P34972 360 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 FRKP42685 505 aaPredicted RBP9.7□□□□□ -0.86
HERC4-207ENST00000460168 NCBP2P52298 156 aaKnown RBP eCLIP9.7□□□□□ -0.86
HERC4-207ENST00000460168 TAS2R60P59551 318 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 ZNF91Q05481 1191 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 SSX2Q16385 188 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 VMACQ2NL98 169 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 SPDYE7PQ495Y7 208 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 ZFP69Q49AA0 526 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 LPCAT4Q643R3 524 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 SLC48A1Q6P1K1 146 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 GPR155Q7Z3F1 870 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 SZRD1Q7Z422 152 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 AMIGO2Q86SJ2 522 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 HIPK1Q86Z02 1210 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 MCATQ8IVS2 390 aaKnown RBP9.7□□□□□ -0.86
HERC4-207ENST00000460168 LILRA2Q8N149 483 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 SLC43A2Q8N370 569 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 LRTOMTQ8WZ04 291 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 RFKQ969G6 155 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 SMIM10Q96HG1 83 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 RAB33BQ9H082 229 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 ALX4Q9H161 411 aaPredicted RBP9.7□□□□□ -0.86
HERC4-207ENST00000460168 GAREM1Q9H706 876 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 CXorf36Q9H7Y0 433 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 CAPN10Q9HC96 672 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 PDE7BQ9NP56 450 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 HMG20AQ9NP66 347 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 ACSS1Q9NUB1 689 aaPredicted RBP9.7□□□□□ -0.86
HERC4-207ENST00000460168 GRHPRQ9UBQ7 328 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 EPHA6Q9UF33 1036 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 RIMS3Q9UJD0 308 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 DAPP1Q9UN19 280 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 MRPS2Q9Y399 296 aaKnown RBP9.7□□□□□ -0.86
HERC4-207ENST00000460168 MAP4K5Q9Y4K4 846 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 TMEM210A6NLX4 147 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 EFCAB7A8K855 629 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 H3BMQ9 156 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 PLD2O14939 933 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 SRPX2O60687 465 aaPredicted RBP9.7□□□□□ -0.86
HERC4-207ENST00000460168 CLPXO76031 633 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 GOSR1O95249 250 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 C8orf89P0DMQ9 161 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 PTAFRP25105 342 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 CASP6P55212 293 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 LIM2P55344 173 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 TNFRSF17Q02223 184 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 FADDQ13158 208 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 LPAL2Q16609 132 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 ATAD3CQ5T2N8 411 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 OGFRL1Q5TC84 451 aaPredicted RBP9.7□□□□□ -0.86
HERC4-207ENST00000460168 CPZQ66K79 652 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 CFAP77Q6ZQR2 320 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 PRSS41Q7RTY9 318 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 RNF130Q86XS8 419 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 KIF18BQ86Y91 864 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 PLXDC1Q8IUK5 500 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 DMRTC2Q8IXT2 367 aaPredicted RBP9.7□□□□□ -0.86
HERC4-207ENST00000460168 OR52N2Q8NGI0 321 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 FAM110BQ8TC76 370 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 SNAPC3Q92966 411 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 ELP4Q96EB1 424 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 RNF145Q96MT1 663 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 CD180Q99467 661 aa9.7□□□□□ -0.86
HERC4-207ENST00000460168 RBM4BQ9BQ04 359 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms