RNA–Protein interactions for RNA: ENST00000459249.1

RNU6ATAC28P-201, Transcript of RNA, U6atac small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6ATAC28P, Length 118 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC28P-201ENST00000459249 SIRT3Q9NTG7 399 aaPredicted RBP4.31□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 MRPS18AQ9NVS2 196 aaKnown RBP4.31□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 C19orf73Q9NVV2 129 aa4.31□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 NMRK1Q9NWW6 199 aa4.31□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 SIRT5Q9NXA8 310 aa4.31□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 AHSPQ9NZD4 102 aa4.31□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 OSGIN1Q9UJX0 560 aa4.31□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 SNX6Q9UNH7 406 aa4.31□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 RCE1Q9Y256 329 aa4.31□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 ADAM18Q9Y3Q7 739 aa4.31□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 SPACA6W5XKT8 324 aa4.31□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 CCDC88CQ9P219 2028 aa4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 LOC100509620A0A075B734 347 aa4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 A0A0U1RQK1 487 aa4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 hCG_1809904A0A1W2PP81 198 aa4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 A0A1W2PPE2 198 aa4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 A0A1W2PR64 198 aa4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 ZNF320A2RRD8 509 aa4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 A6NL46 340 aa4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 A8MV72 311 aaPredicted RBP4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 FOXO6A8MYZ6 492 aa4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 TM9SF1O15321 606 aa4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 RGS16O15492 202 aaPredicted RBP4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 PROM1O43490 865 aa4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 TMPRSS11DO60235 418 aa4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 TRIM13O60858 407 aa4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 EEDO75530 441 aaKnown RBP4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 CDC123O75794 336 aaPredicted RBP4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 OR4F21O95013 312 aa4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 ETHE1O95571 254 aa4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 PNPP00491 289 aa4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 PDYNP01213 254 aa4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 FGF4P08620 206 aa4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 FAM58BPP0C7Q3 252 aa4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 NR2F6P10588 404 aa4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 ITGAMP11215 1152 aa4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 PLA2G2AP14555 144 aa4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 NR1D1P20393 614 aa4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 MAOAP21397 527 aa4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 CPN2P22792 545 aa4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 PRPH2P23942 346 aa4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 EPHA3P29320 983 aa4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 HMOX2P30519 316 aa4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 TLX1P31314 330 aaPredicted RBP4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 GSTM5P46439 218 aa4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 GPR143P51810 404 aa4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 HNRNPFP52597 415 aaKnown RBP4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 DGKQP52824 942 aa4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 MVDP53602 400 aa4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 SLC18A1P54219 525 aa4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 NAGLUP54802 743 aa4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 HNRNPH2P55795 449 aaKnown RBP4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 TAS2R50P59544 299 aa4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 RPL15P61313 204 aaKnown RBP4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 TRA2BP62995 288 aaKnown RBP4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 BTG2P78543 158 aa4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 ACTN3Q08043 901 aaPredicted RBP4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 SLAMF1Q13291 335 aa4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 GSTA3Q16772 222 aa4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 SMU1Q2TAY7 513 aa4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 CFAP157Q5JU67 520 aa4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 SPDYAQ5MJ70 313 aa4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 BEND6Q5SZJ8 279 aaPredicted RBP4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 CEP85LQ5SZL2 805 aa4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 ABHD17BQ5VST6 288 aa4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 FAM90A2PQ658T7 463 aa4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 TTC19Q6DKK2 380 aaPredicted RBP4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 SFRP4Q6FHJ7 346 aaPredicted RBP4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 OR52E8Q6IFG1 317 aa4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 RAB12Q6IQ22 244 aa4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 CCDC144NLQ6NUI1 221 aa4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 MSANTD1Q6ZTZ1 278 aa4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 LARP4Q71RC2 724 aaKnown RBP eCLIP4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 RPS27LQ71UM5 84 aaKnown RBP4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 RRM2BQ7LG56 351 aa4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 ZNF605Q86T29 641 aa4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 GPR180Q86V85 440 aa4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 ZDHHC13Q8IUH4 622 aa4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 C10orf107Q8IVU9 208 aa4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 TMEM132CQ8N3T6 1108 aa4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 RNF175Q8N4F7 328 aa4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 ZADH2Q8N4Q0 377 aa4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 SLC5A8Q8N695 610 aa4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 CCNYL1Q8N7R7 359 aa4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 RBMXL3Q8N7X1 1067 aaKnown RBP4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 LINC00482Q8N8I6 264 aa4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 NFAM1Q8NET5 270 aaPredicted RBP4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 B3GNT7Q8NFL0 401 aa4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 OR8K3Q8NH51 312 aa4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 OR14A16Q8NHC5 309 aa4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 SETD6Q8TBK2 473 aa4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 TBC1D15Q8TC07 691 aa4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 ELP5Q8TE02 316 aa4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 ZFAND2BQ8WV99 257 aa4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 SELENOMQ8WWX9 145 aa4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 HAS2Q92819 552 aa4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 DAZLQ92904 295 aaKnown RBP4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 TP53INP1Q96A56 240 aa4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 ANKRD9Q96BM1 317 aaPredicted RBP4.3□□□□□ -1.72
RNU6ATAC28P-201ENST00000459249 RNFT2Q96EX2 444 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms