RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 HCN1O60741 890 aa13.21□□□□□ -0.3
SCFD1-203ENST00000458591 REM1O75628 298 aa13.21□□□□□ -0.3
SCFD1-203ENST00000458591 PAHP00439 452 aa13.21□□□□□ -0.3
SCFD1-203ENST00000458591 FGF9P31371 208 aaPredicted RBP13.21□□□□□ -0.3
SCFD1-203ENST00000458591 RAB28P51157 221 aa13.21□□□□□ -0.3
SCFD1-203ENST00000458591 RGS8P57771 180 aaPredicted RBP13.21□□□□□ -0.3
SCFD1-203ENST00000458591 PPP3R1P63098 170 aa13.21□□□□□ -0.3
SCFD1-203ENST00000458591 IDNKQ5T6J7 187 aa13.21□□□□□ -0.3
SCFD1-203ENST00000458591 MRM1Q6IN84 353 aaKnown RBP13.21□□□□□ -0.3
SCFD1-203ENST00000458591 MZT2BQ6NZ67 158 aa13.21□□□□□ -0.3
SCFD1-203ENST00000458591 SLC48A1Q6P1K1 146 aa13.21□□□□□ -0.3
SCFD1-203ENST00000458591 C16orf62Q7Z3J2 963 aa13.21□□□□□ -0.3
SCFD1-203ENST00000458591 POGLUT1Q8NBL1 392 aa13.21□□□□□ -0.3
SCFD1-203ENST00000458591 OR7G2Q8NG99 324 aa13.21□□□□□ -0.3
SCFD1-203ENST00000458591 PIGXQ8TBF5 258 aa13.21□□□□□ -0.3
SCFD1-203ENST00000458591 GIMAP5Q96F15 307 aa13.21□□□□□ -0.3
SCFD1-203ENST00000458591 SLC41A3Q96GZ6 507 aa13.21□□□□□ -0.3
SCFD1-203ENST00000458591 PAWRQ96IZ0 340 aaKnown RBP13.21□□□□□ -0.3
SCFD1-203ENST00000458591 TTTY10Q9BZA0 68 aa13.21□□□□□ -0.3
SCFD1-203ENST00000458591 NT5DC2Q9H857 520 aa13.21□□□□□ -0.3
SCFD1-203ENST00000458591 ATP13A2Q9NQ11 1180 aa13.21□□□□□ -0.3
SCFD1-203ENST00000458591 FBXO34Q9NWN3 711 aa13.21□□□□□ -0.3
SCFD1-203ENST00000458591 ZFR2Q9UPR6 939 aaKnown RBP13.21□□□□□ -0.3
SCFD1-203ENST00000458591 ENTPD4Q9Y227 616 aa13.21□□□□□ -0.3
SCFD1-203ENST00000458591 LTBP2Q14767 1821 aa13.21□□□□□ -0.3
SCFD1-203ENST00000458591 SNRNP200O75643 2136 aaKnown RBP13.2□□□□□ -0.3
SCFD1-203ENST00000458591 TRPM6Q9BX84 2022 aa13.2□□□□□ -0.3
SCFD1-203ENST00000458591 FAM240BA0A1B0GVZ2 78 aa13.2□□□□□ -0.3
SCFD1-203ENST00000458591 A0A1W2PP55 124 aa13.2□□□□□ -0.3
SCFD1-203ENST00000458591 IRGMA1A4Y4 181 aa13.2□□□□□ -0.3
SCFD1-203ENST00000458591 LYRM1O43325 122 aa13.2□□□□□ -0.3
SCFD1-203ENST00000458591 RPN2P04844 631 aa13.2□□□□□ -0.3
SCFD1-203ENST00000458591 CSNK2A2P19784 350 aaPredicted RBP13.2□□□□□ -0.3
SCFD1-203ENST00000458591 CPN2P22792 545 aa13.2□□□□□ -0.3
SCFD1-203ENST00000458591 OR10A3P58181 314 aa13.2□□□□□ -0.3
SCFD1-203ENST00000458591 ST3GAL3Q11203 375 aa13.2□□□□□ -0.3
SCFD1-203ENST00000458591 PGGHGQ32M88 737 aa13.2□□□□□ -0.3
SCFD1-203ENST00000458591 CCDC58Q4VC31 144 aa13.2□□□□□ -0.3
SCFD1-203ENST00000458591 ZNF57Q68EA5 555 aaPredicted RBP13.2□□□□□ -0.3
SCFD1-203ENST00000458591 TIGD3Q6B0B8 471 aa13.2□□□□□ -0.3
SCFD1-203ENST00000458591 WDR88Q6ZMY6 472 aa13.2□□□□□ -0.3
SCFD1-203ENST00000458591 PFN4Q8NHR9 129 aa13.2□□□□□ -0.3
SCFD1-203ENST00000458591 ZFAND1Q8TCF1 268 aa13.2□□□□□ -0.3
SCFD1-203ENST00000458591 ZNF681Q96N22 645 aa13.2□□□□□ -0.3
SCFD1-203ENST00000458591 TIMP4Q99727 224 aa13.2□□□□□ -0.3
SCFD1-203ENST00000458591 DPH1Q9BZG8 443 aa13.2□□□□□ -0.3
SCFD1-203ENST00000458591 PCBD2Q9H0N5 130 aa13.2□□□□□ -0.3
SCFD1-203ENST00000458591 SLC6A17Q9H1V8 727 aa13.2□□□□□ -0.3
SCFD1-203ENST00000458591 C20orf141Q9NUB4 165 aa13.2□□□□□ -0.3
SCFD1-203ENST00000458591 GPSM3Q9Y4H4 160 aa13.2□□□□□ -0.3
SCFD1-203ENST00000458591 CASC3O15234 703 aaKnown RBP13.2□□□□□ -0.3
SCFD1-203ENST00000458591 EMC8O43402 210 aa13.2□□□□□ -0.3
SCFD1-203ENST00000458591 PROM1O43490 865 aa13.2□□□□□ -0.3
SCFD1-203ENST00000458591 FGF19O95750 216 aa13.2□□□□□ -0.3
SCFD1-203ENST00000458591 EML2O95834 649 aa13.2□□□□□ -0.3
SCFD1-203ENST00000458591 MRPL3P09001 348 aaKnown RBP13.2□□□□□ -0.3
SCFD1-203ENST00000458591 MYOGP15173 224 aa13.2□□□□□ -0.3
SCFD1-203ENST00000458591 SHC1P29353 583 aa13.2□□□□□ -0.3
SCFD1-203ENST00000458591 MAT2AP31153 395 aaKnown RBP13.2□□□□□ -0.3
SCFD1-203ENST00000458591 EVI2BP34910 448 aa13.2□□□□□ -0.3
SCFD1-203ENST00000458591 VEGFBP49765 207 aa13.2□□□□□ -0.3
SCFD1-203ENST00000458591 VASPP50552 380 aaPredicted RBP13.2□□□□□ -0.3
SCFD1-203ENST00000458591 FXYD6P3P58550 94 aa13.2□□□□□ -0.3
SCFD1-203ENST00000458591 GPLD1P80108 840 aa13.2□□□□□ -0.3
SCFD1-203ENST00000458591 ABATP80404 500 aa13.2□□□□□ -0.3
SCFD1-203ENST00000458591 HTRA4P83105 476 aaPredicted RBP13.2□□□□□ -0.3
SCFD1-203ENST00000458591 DUSP6Q16828 381 aa13.2□□□□□ -0.3
SCFD1-203ENST00000458591 RNASE12Q5GAN4 147 aaKnown RBP13.2□□□□□ -0.3
SCFD1-203ENST00000458591 AGBL4Q5VU57 503 aa13.2□□□□□ -0.3
SCFD1-203ENST00000458591 KLHL36Q8N4N3 616 aa13.2□□□□□ -0.3
SCFD1-203ENST00000458591 TMEM43Q9BTV4 400 aa13.2□□□□□ -0.3
SCFD1-203ENST00000458591 WDR26Q9H7D7 661 aa13.2□□□□□ -0.3
SCFD1-203ENST00000458591 RBFOX1Q9NWB1 397 aaKnown RBP13.2□□□□□ -0.3
SCFD1-203ENST00000458591 MCUBQ9NWR8 336 aa13.2□□□□□ -0.3
SCFD1-203ENST00000458591 PTGFRNQ9P2B2 879 aa13.2□□□□□ -0.3
SCFD1-203ENST00000458591 CLEC4AQ9UMR7 237 aa13.2□□□□□ -0.3
SCFD1-203ENST00000458591 SPTBN5Q9NRC6 3674 aaKnown RBP13.19□□□□□ -0.3
SCFD1-203ENST00000458591 C12orf71A8MTZ7 269 aa13.19□□□□□ -0.3
SCFD1-203ENST00000458591 CLUP10909 449 aa13.19□□□□□ -0.3
SCFD1-203ENST00000458591 TRA2BP62995 288 aaKnown RBP13.19□□□□□ -0.3
SCFD1-203ENST00000458591 FAPQ12884 760 aa13.19□□□□□ -0.3
SCFD1-203ENST00000458591 GPR68Q15743 365 aa13.19□□□□□ -0.3
SCFD1-203ENST00000458591 MAPK14Q16539 360 aa13.19□□□□□ -0.3
SCFD1-203ENST00000458591 ZNF322Q6U7Q0 402 aaPredicted RBP13.19□□□□□ -0.3
SCFD1-203ENST00000458591 RPTNQ6XPR3 784 aa13.19□□□□□ -0.3
SCFD1-203ENST00000458591 TMEM64Q6YI46 380 aa13.19□□□□□ -0.3
SCFD1-203ENST00000458591 FRRS1Q6ZNA5 592 aa13.19□□□□□ -0.3
SCFD1-203ENST00000458591 PLCZ1Q86YW0 608 aa13.19□□□□□ -0.3
SCFD1-203ENST00000458591 LIX1LQ8IVB5 337 aa13.19□□□□□ -0.3
SCFD1-203ENST00000458591 GHDCQ8N2G8 530 aa13.19□□□□□ -0.3
SCFD1-203ENST00000458591 LINC00471Q8N535 108 aa13.19□□□□□ -0.3
SCFD1-203ENST00000458591 DNAJC5GQ8N7S2 189 aa13.19□□□□□ -0.3
SCFD1-203ENST00000458591 OR2L3Q8NG85 312 aa13.19□□□□□ -0.3
SCFD1-203ENST00000458591 IRF2BPLQ9H1B7 796 aa13.19□□□□□ -0.3
SCFD1-203ENST00000458591 IL20Q9NYY1 176 aa13.19□□□□□ -0.3
SCFD1-203ENST00000458591 TMA7Q9Y2S6 64 aaKnown RBP13.19□□□□□ -0.3
SCFD1-203ENST00000458591 ATG2BQ96BY7 2078 aa13.19□□□□□ -0.3
SCFD1-203ENST00000458591 MYO10Q9HD67 2058 aa13.19□□□□□ -0.3
SCFD1-203ENST00000458591 SNTNA6NMZ2 147 aa13.18□□□□□ -0.3
SCFD1-203ENST00000458591 MAGEB4O15481 346 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms