RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 UCK2Q9BZX2 261 aa16.99■□□□□ 0.31
USP39-209ENST00000458268 OR2B2Q9GZK3 357 aa16.99■□□□□ 0.31
USP39-209ENST00000458268 NTMQ9P121 344 aa16.99■□□□□ 0.31
USP39-209ENST00000458268 HMGB1P1B2RPK0 211 aaPredicted RBP16.98■□□□□ 0.31
USP39-209ENST00000458268 KDM4EB2RXH2 506 aaPredicted RBP16.98■□□□□ 0.31
USP39-209ENST00000458268 H0Y3Z8 333 aa16.98■□□□□ 0.31
USP39-209ENST00000458268 KRT16P08779 473 aa16.98■□□□□ 0.31
USP39-209ENST00000458268 SRD5A2P31213 254 aa16.98■□□□□ 0.31
USP39-209ENST00000458268 GAS1P54826 345 aa16.98■□□□□ 0.31
USP39-209ENST00000458268 ANXA8L1Q5VT79 327 aa16.98■□□□□ 0.31
USP39-209ENST00000458268 VASNQ6EMK4 673 aa16.98■□□□□ 0.31
USP39-209ENST00000458268 OGFOD2Q6N063 350 aa16.98■□□□□ 0.31
USP39-209ENST00000458268 CDC73Q6P1J9 531 aa16.98■□□□□ 0.31
USP39-209ENST00000458268 ZCCHC12Q6PEW1 402 aa16.98■□□□□ 0.31
USP39-209ENST00000458268 MAVSQ7Z434 540 aa16.98■□□□□ 0.31
USP39-209ENST00000458268 UBQLNLQ8IYU4 475 aa16.98■□□□□ 0.31
USP39-209ENST00000458268 VPS37AQ8NEZ2 397 aa16.98■□□□□ 0.31
USP39-209ENST00000458268 OR2M3Q8NG83 312 aa16.98■□□□□ 0.31
USP39-209ENST00000458268 ASB5Q8WWX0 329 aa16.98■□□□□ 0.31
USP39-209ENST00000458268 MOAP1Q96BY2 351 aa16.98■□□□□ 0.31
USP39-209ENST00000458268 TEX37Q96LM6 180 aa16.98■□□□□ 0.31
USP39-209ENST00000458268 OR7D2Q96RA2 312 aa16.98■□□□□ 0.31
USP39-209ENST00000458268 OR52B2Q96RD2 323 aa16.98■□□□□ 0.31
USP39-209ENST00000458268 BTBD2Q9BX70 525 aa16.98■□□□□ 0.31
USP39-209ENST00000458268 SLCO1B3Q9NPD5 702 aa16.98■□□□□ 0.31
USP39-209ENST00000458268 INTS9Q9NV88 658 aaKnown RBP16.98■□□□□ 0.31
USP39-209ENST00000458268 KCNE3Q9Y6H6 103 aa16.98■□□□□ 0.31
USP39-209ENST00000458268 USH1CQ9Y6N9 552 aa16.98■□□□□ 0.31
USP39-209ENST00000458268 KIAA1549Q9HCM3 1950 aa16.98■□□□□ 0.31
USP39-209ENST00000458268 C19orf84I3L1E1 186 aa16.97■□□□□ 0.31
USP39-209ENST00000458268 RNASET2O00584 256 aaKnown RBP16.97■□□□□ 0.31
USP39-209ENST00000458268 SCDO00767 359 aa16.97■□□□□ 0.31
USP39-209ENST00000458268 NDUFB5O43674 189 aa16.97■□□□□ 0.31
USP39-209ENST00000458268 OXSR1O95747 527 aaPredicted RBP16.97■□□□□ 0.31
USP39-209ENST00000458268 MATN1P21941 496 aa16.97■□□□□ 0.31
USP39-209ENST00000458268 CHRNB4P30926 498 aa16.97■□□□□ 0.31
USP39-209ENST00000458268 CHI3L1P36222 383 aaPredicted RBP16.97■□□□□ 0.31
USP39-209ENST00000458268 C21orf58P58505 322 aa16.97■□□□□ 0.31
USP39-209ENST00000458268 PPP2R2AP63151 447 aa16.97■□□□□ 0.31
USP39-209ENST00000458268 ACSF3Q4G176 576 aaPredicted RBP16.97■□□□□ 0.31
USP39-209ENST00000458268 DCST2Q5T1A1 773 aa16.97■□□□□ 0.31
USP39-209ENST00000458268 BHLHB9Q6PI77 547 aa16.97■□□□□ 0.31
USP39-209ENST00000458268 ENPP6Q6UWR7 440 aa16.97■□□□□ 0.31
USP39-209ENST00000458268 APOOLQ6UXV4 268 aa16.97■□□□□ 0.31
USP39-209ENST00000458268 C6orf120Q7Z4R8 191 aa16.97■□□□□ 0.31
USP39-209ENST00000458268 CAMKMTQ7Z624 323 aa16.97■□□□□ 0.31
USP39-209ENST00000458268 PM20D2Q8IYS1 436 aa16.97■□□□□ 0.31
USP39-209ENST00000458268 OR4C3Q8NH37 302 aa16.97■□□□□ 0.31
USP39-209ENST00000458268 SMPDL3BQ92485 455 aa16.97■□□□□ 0.31
USP39-209ENST00000458268 MARVELD3Q96A59 401 aa16.97■□□□□ 0.31
USP39-209ENST00000458268 NTNG2Q96CW9 530 aa16.97■□□□□ 0.31
USP39-209ENST00000458268 G6PC3Q9BUM1 346 aa16.97■□□□□ 0.31
USP39-209ENST00000458268 PIGUQ9H490 435 aa16.97■□□□□ 0.31
USP39-209ENST00000458268 PTGES2Q9H7Z7 377 aa16.97■□□□□ 0.31
USP39-209ENST00000458268 VIPAS39Q9H9C1 493 aa16.97■□□□□ 0.31
USP39-209ENST00000458268 GPATCH2Q9NW75 528 aa16.97■□□□□ 0.31
USP39-209ENST00000458268 VDAC3Q9Y277 283 aa16.97■□□□□ 0.31
USP39-209ENST00000458268 KLF2Q9Y5W3 355 aaPredicted RBP16.97■□□□□ 0.31
USP39-209ENST00000458268 A0A0G2JNJ9 132 aa16.96■□□□□ 0.31
USP39-209ENST00000458268 B4DXG7 233 aa16.96■□□□□ 0.31
USP39-209ENST00000458268 SHISA8B8ZZ34 492 aa16.96■□□□□ 0.31
USP39-209ENST00000458268 KLF11O14901 512 aa16.96■□□□□ 0.31
USP39-209ENST00000458268 ANKRD28O15084 1053 aa16.96■□□□□ 0.31
USP39-209ENST00000458268 SASH3O75995 380 aa16.96■□□□□ 0.31
USP39-209ENST00000458268 ACTL6AO96019 429 aa16.96■□□□□ 0.31
USP39-209ENST00000458268 COX6B1P14854 86 aa16.96■□□□□ 0.31
USP39-209ENST00000458268 AGAP20933 346 aa16.96■□□□□ 0.31
USP39-209ENST00000458268 ADH7P40394 386 aa16.96■□□□□ 0.31
USP39-209ENST00000458268 MAP3K8P41279 467 aa16.96■□□□□ 0.31
USP39-209ENST00000458268 DSCR4P56555 118 aaPredicted RBP16.96■□□□□ 0.31
USP39-209ENST00000458268 PHC1P78364 1004 aa16.96■□□□□ 0.31
USP39-209ENST00000458268 RCAN2Q14206 197 aa16.96■□□□□ 0.31
USP39-209ENST00000458268 ZNF630Q2M218 657 aaPredicted RBP16.96■□□□□ 0.31
USP39-209ENST00000458268 TNFAIP8L2Q6P589 184 aaPredicted RBP16.96■□□□□ 0.31
USP39-209ENST00000458268 PLXDC2Q6UX71 529 aa16.96■□□□□ 0.31
USP39-209ENST00000458268 DNAJC14Q6Y2X3 702 aaPredicted RBP16.96■□□□□ 0.31
USP39-209ENST00000458268 OLIG3Q7RTU3 272 aa16.96■□□□□ 0.31
USP39-209ENST00000458268 OR8J2Q8NGG1 315 aa16.96■□□□□ 0.31
USP39-209ENST00000458268 PSMA8Q8TAA3 256 aa16.96■□□□□ 0.31
USP39-209ENST00000458268 TESCQ96BS2 214 aa16.96■□□□□ 0.31
USP39-209ENST00000458268 THOC1Q96FV9 657 aaKnown RBP16.96■□□□□ 0.31
USP39-209ENST00000458268 WDYHV1Q96HA8 205 aa16.96■□□□□ 0.31
USP39-209ENST00000458268 STACQ99469 402 aa16.96■□□□□ 0.31
USP39-209ENST00000458268 SH3GL2Q99962 352 aa16.96■□□□□ 0.31
USP39-209ENST00000458268 DUSP22Q9NRW4 184 aa16.96■□□□□ 0.31
USP39-209ENST00000458268 Q9UFV3 132 aa16.96■□□□□ 0.31
USP39-209ENST00000458268 CACNA1DQ01668 2161 aa16.96■□□□□ 0.31
USP39-209ENST00000458268 PRSS51A0A1B0GVH4 220 aa16.95■□□□□ 0.3
USP39-209ENST00000458268 H3BML4 177 aa16.95■□□□□ 0.3
USP39-209ENST00000458268 UBDO15205 165 aa16.95■□□□□ 0.3
USP39-209ENST00000458268 SEC14L5O43304 696 aa16.95■□□□□ 0.3
USP39-209ENST00000458268 GSNP06396 782 aa16.95■□□□□ 0.3
USP39-209ENST00000458268 IL12AP29459 219 aa16.95■□□□□ 0.3
USP39-209ENST00000458268 ZFP36L2P47974 494 aaKnown RBP16.95■□□□□ 0.3
USP39-209ENST00000458268 C17orf67Q0P5P2 114 aa16.95■□□□□ 0.3
USP39-209ENST00000458268 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.95■□□□□ 0.3
USP39-209ENST00000458268 DPY19L1Q2PZI1 675 aa16.95■□□□□ 0.3
USP39-209ENST00000458268 FLYWCH1Q4VC44 716 aa16.95■□□□□ 0.3
USP39-209ENST00000458268 PPP4R4Q6NUP7 873 aa16.95■□□□□ 0.3
USP39-209ENST00000458268 AAGABQ6PD74 315 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms