RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 ANGPTL1O95841 491 aa16.44■□□□□ 0.22
PDLIM2-215ENST00000456545 ALDOCP09972 364 aaKnown RBP16.44■□□□□ 0.22
PDLIM2-215ENST00000456545 GLI4P10075 376 aa16.44■□□□□ 0.22
PDLIM2-215ENST00000456545 IDO1P14902 403 aa16.44■□□□□ 0.22
PDLIM2-215ENST00000456545 CHRNB4P30926 498 aa16.44■□□□□ 0.22
PDLIM2-215ENST00000456545 LCN1P31025 176 aa16.44■□□□□ 0.22
PDLIM2-215ENST00000456545 RCAN2Q14206 197 aa16.44■□□□□ 0.22
PDLIM2-215ENST00000456545 ZNF630Q2M218 657 aaPredicted RBP16.44■□□□□ 0.22
PDLIM2-215ENST00000456545 FAM174BQ3ZCQ3 159 aa16.44■□□□□ 0.22
PDLIM2-215ENST00000456545 SLC9B1Q4ZJI4 515 aa16.44■□□□□ 0.22
PDLIM2-215ENST00000456545 NHSL2Q5HYW2 709 aa16.44■□□□□ 0.22
PDLIM2-215ENST00000456545 SPANXN4Q5MJ08 99 aa16.44■□□□□ 0.22
PDLIM2-215ENST00000456545 CCNJQ5T5M9 372 aa16.44■□□□□ 0.22
PDLIM2-215ENST00000456545 ZNF787Q6DD87 383 aa16.44■□□□□ 0.22
PDLIM2-215ENST00000456545 CCDC71Q8IV32 467 aaPredicted RBP16.44■□□□□ 0.22
PDLIM2-215ENST00000456545 FAM110BQ8TC76 370 aa16.44■□□□□ 0.22
PDLIM2-215ENST00000456545 UBQLN4Q9NRR5 601 aa16.44■□□□□ 0.22
PDLIM2-215ENST00000456545 GIN1Q9NXP7 522 aa16.44■□□□□ 0.22
PDLIM2-215ENST00000456545 MRPS18CQ9Y3D5 142 aaKnown RBP16.44■□□□□ 0.22
PDLIM2-215ENST00000456545 USH1CQ9Y6N9 552 aa16.44■□□□□ 0.22
PDLIM2-215ENST00000456545 RNF103-CHMP3A0A140T963 221 aa16.43■□□□□ 0.22
PDLIM2-215ENST00000456545 ANKRD28O15084 1053 aa16.43■□□□□ 0.22
PDLIM2-215ENST00000456545 UBDO15205 165 aa16.43■□□□□ 0.22
PDLIM2-215ENST00000456545 GMFGO60234 142 aa16.43■□□□□ 0.22
PDLIM2-215ENST00000456545 HK1P19367 917 aa16.43■□□□□ 0.22
PDLIM2-215ENST00000456545 TBXA2RP21731 343 aa16.43■□□□□ 0.22
PDLIM2-215ENST00000456545 UQCRC2P22695 453 aa16.43■□□□□ 0.22
PDLIM2-215ENST00000456545 CHI3L1P36222 383 aaPredicted RBP16.43■□□□□ 0.22
PDLIM2-215ENST00000456545 DCTP40126 519 aa16.43■□□□□ 0.22
PDLIM2-215ENST00000456545 ZFP36L2P47974 494 aaKnown RBP16.43■□□□□ 0.22
PDLIM2-215ENST00000456545 WNT3P56703 355 aa16.43■□□□□ 0.22
PDLIM2-215ENST00000456545 SRYQ05066 204 aa16.43■□□□□ 0.22
PDLIM2-215ENST00000456545 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.43■□□□□ 0.22
PDLIM2-215ENST00000456545 RTL6Q6ICC9 239 aa16.43■□□□□ 0.22
PDLIM2-215ENST00000456545 OR2M3Q8NG83 312 aa16.43■□□□□ 0.22
PDLIM2-215ENST00000456545 OR4C3Q8NH37 302 aa16.43■□□□□ 0.22
PDLIM2-215ENST00000456545 ACTRT2Q8TDY3 377 aa16.43■□□□□ 0.22
PDLIM2-215ENST00000456545 RNF138Q8WVD3 245 aa16.43■□□□□ 0.22
PDLIM2-215ENST00000456545 SLC35G5Q96KT7 338 aa16.43■□□□□ 0.22
PDLIM2-215ENST00000456545 C7orf26Q96N11 449 aa16.43■□□□□ 0.22
PDLIM2-215ENST00000456545 OR7D2Q96RA2 312 aa16.43■□□□□ 0.22
PDLIM2-215ENST00000456545 OR52E6Q96RD3 313 aa16.43■□□□□ 0.22
PDLIM2-215ENST00000456545 TRIB1Q96RU8 372 aa16.43■□□□□ 0.22
PDLIM2-215ENST00000456545 HOXD1Q9GZZ0 328 aa16.43■□□□□ 0.22
PDLIM2-215ENST00000456545 KCNJ16Q9NPI9 418 aa16.43■□□□□ 0.22
PDLIM2-215ENST00000456545 FAM215AQ9Y5M1 114 aa16.43■□□□□ 0.22
PDLIM2-215ENST00000456545 GPR45Q9Y5Y3 372 aa16.43■□□□□ 0.22
PDLIM2-215ENST00000456545 USP9YO00507 2555 aaPredicted RBP16.43■□□□□ 0.22
PDLIM2-215ENST00000456545 PTPN13Q12923 2485 aa16.43■□□□□ 0.22
PDLIM2-215ENST00000456545 SPTBN1Q01082 2364 aaKnown RBP16.43■□□□□ 0.22
PDLIM2-215ENST00000456545 PHF3Q92576 2039 aaKnown RBP16.42■□□□□ 0.22
PDLIM2-215ENST00000456545 H0Y3Z8 333 aa16.42■□□□□ 0.22
PDLIM2-215ENST00000456545 SLC22A3O75751 556 aa16.42■□□□□ 0.22
PDLIM2-215ENST00000456545 OXSR1O95747 527 aaPredicted RBP16.42■□□□□ 0.22
PDLIM2-215ENST00000456545 DGKQP52824 942 aa16.42■□□□□ 0.22
PDLIM2-215ENST00000456545 GANABQ14697 944 aaKnown RBP16.42■□□□□ 0.22
PDLIM2-215ENST00000456545 GSTA3Q16772 222 aa16.42■□□□□ 0.22
PDLIM2-215ENST00000456545 DCST2Q5T1A1 773 aa16.42■□□□□ 0.22
PDLIM2-215ENST00000456545 RAET1LQ5VY80 246 aa16.42■□□□□ 0.22
PDLIM2-215ENST00000456545 CHMP1BQ7LBR1 199 aa16.42■□□□□ 0.22
PDLIM2-215ENST00000456545 CLEC4FQ8N1N0 589 aa16.42■□□□□ 0.22
PDLIM2-215ENST00000456545 TRIML2Q8N7C3 387 aa16.42■□□□□ 0.22
PDLIM2-215ENST00000456545 GATSQ8NAP1 163 aa16.42■□□□□ 0.22
PDLIM2-215ENST00000456545 ZNF527Q8NB42 609 aa16.42■□□□□ 0.22
PDLIM2-215ENST00000456545 GLB1L3Q8NCI6 653 aaPredicted RBP16.42■□□□□ 0.22
PDLIM2-215ENST00000456545 WDYHV1Q96HA8 205 aa16.42■□□□□ 0.22
PDLIM2-215ENST00000456545 MARK4Q96L34 752 aa16.42■□□□□ 0.22
PDLIM2-215ENST00000456545 PRDM14Q9GZV8 571 aa16.42■□□□□ 0.22
PDLIM2-215ENST00000456545 EXD2Q9NVH0 621 aa16.42■□□□□ 0.22
PDLIM2-215ENST00000456545 GPATCH2Q9NW75 528 aa16.42■□□□□ 0.22
PDLIM2-215ENST00000456545 FBXO34Q9NWN3 711 aa16.42■□□□□ 0.22
PDLIM2-215ENST00000456545 PCNX1Q96RV3 2341 aa16.41■□□□□ 0.22
PDLIM2-215ENST00000456545 NCOA6Q14686 2063 aaPredicted RBP16.41■□□□□ 0.22
PDLIM2-215ENST00000456545 FAM90A27PA6NNH2 459 aa16.41■□□□□ 0.22
PDLIM2-215ENST00000456545 C17orf51A8MQB3 221 aa16.41■□□□□ 0.22
PDLIM2-215ENST00000456545 ALG1L2C9J202 215 aa16.41■□□□□ 0.22
PDLIM2-215ENST00000456545 H3BNH8 94 aa16.41■□□□□ 0.22
PDLIM2-215ENST00000456545 POLR3GO15318 223 aaPredicted RBP16.41■□□□□ 0.22
PDLIM2-215ENST00000456545 HNRNPRO43390 633 aaKnown RBP16.41■□□□□ 0.22
PDLIM2-215ENST00000456545 EPPINO95925 133 aa16.41■□□□□ 0.22
PDLIM2-215ENST00000456545 IL2RAP01589 272 aa16.41■□□□□ 0.22
PDLIM2-215ENST00000456545 NGFRP08138 427 aa16.41■□□□□ 0.22
PDLIM2-215ENST00000456545 CHMP24386 653 aa16.41■□□□□ 0.22
PDLIM2-215ENST00000456545 GRNP28799 593 aaKnown RBP16.41■□□□□ 0.22
PDLIM2-215ENST00000456545 STARP49675 285 aa16.41■□□□□ 0.22
PDLIM2-215ENST00000456545 RPS26P62854 115 aaKnown RBP16.41■□□□□ 0.22
PDLIM2-215ENST00000456545 PHC1P78364 1004 aa16.41■□□□□ 0.22
PDLIM2-215ENST00000456545 LRRC74AQ0VAA2 488 aa16.41■□□□□ 0.22
PDLIM2-215ENST00000456545 PDCD4Q53EL6 469 aaKnown RBP16.41■□□□□ 0.22
PDLIM2-215ENST00000456545 ATAD3BQ5T9A4 648 aa16.41■□□□□ 0.22
PDLIM2-215ENST00000456545 ZNF621Q6ZSS3 439 aa16.41■□□□□ 0.22
PDLIM2-215ENST00000456545 FADS6Q8N9I5 356 aa16.41■□□□□ 0.22
PDLIM2-215ENST00000456545 OR5D16Q8NGK9 328 aa16.41■□□□□ 0.22
PDLIM2-215ENST00000456545 LILRB4Q8NHJ6 448 aa16.41■□□□□ 0.22
PDLIM2-215ENST00000456545 MAELQ96JY0 434 aaKnown RBP16.41■□□□□ 0.22
PDLIM2-215ENST00000456545 TEX37Q96LM6 180 aa16.41■□□□□ 0.22
PDLIM2-215ENST00000456545 OR52B2Q96RD2 323 aa16.41■□□□□ 0.22
PDLIM2-215ENST00000456545 PANX1Q96RD7 426 aa16.41■□□□□ 0.22
PDLIM2-215ENST00000456545 RTN4RQ9BZR6 473 aa16.41■□□□□ 0.22
PDLIM2-215ENST00000456545 SLCO1B3Q9NPD5 702 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms