RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 MEX3DQ86XN8 651 aaKnown RBP3.3□□□□□ -1.88
RBM39-220ENST00000455343 KLHDC8AQ8IYD2 350 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 CPNE9Q8IYJ1 553 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 GCNT2Q8N0V5 402 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 TBC1D19Q8N5T2 526 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 LRRC57Q8N9N7 239 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 FAM47BQ8NA70 645 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 C7orf57Q8NEG2 295 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 FAM83FQ8NEG4 500 aaPredicted RBP3.3□□□□□ -1.88
RBM39-220ENST00000455343 SEMA6DQ8NFY4 1073 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 LILRB1Q8NHL6 650 aaPredicted RBP3.3□□□□□ -1.88
RBM39-220ENST00000455343 GABPB2Q8TAK5 448 aaPredicted RBP3.3□□□□□ -1.88
RBM39-220ENST00000455343 POC1BQ8TC44 478 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 SPPL2AQ8TCT8 520 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 EEF1AKMT1Q8WVE0 214 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 SLC5A11Q8WWX8 675 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 UCN3Q969E3 161 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 RFKQ969G6 155 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 FBXL8Q96CD0 374 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 TRMT61AQ96FX7 289 aaKnown RBP3.3□□□□□ -1.88
RBM39-220ENST00000455343 CLPTM1LQ96KA5 538 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 JSRP1Q96MG2 331 aaPredicted RBP3.3□□□□□ -1.88
RBM39-220ENST00000455343 RILPQ96NA2 401 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 TNFRSF13CQ96RJ3 184 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 OSBPL9Q96SU4 736 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 AIF1LQ9BQI0 150 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 ALG8Q9BVK2 526 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 BEX2Q9BXY8 128 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 PELI2Q9HAT8 420 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 EIF2B3Q9NR50 452 aaKnown RBP3.3□□□□□ -1.88
RBM39-220ENST00000455343 ETAA1Q9NY74 926 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 BFARQ9NZS9 450 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 IFNKQ9P0W0 207 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 COPS7AQ9UBW8 275 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 LPAR3Q9UBY5 353 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 MCM8Q9UJA3 840 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 AMFRQ9UKV5 643 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 TFR2Q9UP52 801 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 LAMP3Q9UQV4 416 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 COMMD10Q9Y6G5 202 aa3.3□□□□□ -1.88
RBM39-220ENST00000455343 KMT2CQ8NEZ4 4911 aaKnown RBP3.3□□□□□ -1.88
RBM39-220ENST00000455343 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.3□□□□□ -1.886e-11■■□□□ 13.2
RBM39-220ENST00000455343 ROS1P08922 2347 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 IGHV4-30-2A0A087WSY4 118 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 A0A088AWK7 358 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 A0A0G2JN53 185 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 ZCWPW2A0A1B0GU75 182 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 SERINC4A6NH21 518 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 E7EVH7 732 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 F2RL2O00254 374 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 PLOD2O00469 737 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 TP53I11O14683 189 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 EMC8O43402 210 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 LIASO43766 372 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 FGF17O60258 216 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 NDUFS7O75251 213 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 CDH16O75309 829 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 SCELO95171 688 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 LRATO95237 230 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 IFNB1P01574 187 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 CD8AP01732 235 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 F7P08709 466 aaPredicted RBP3.29□□□□□ -1.88
RBM39-220ENST00000455343 HIST1H2AGP0C0S8 130 aaPredicted RBP3.29□□□□□ -1.88
RBM39-220ENST00000455343 ZSCAN5DPP0CG00 497 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 NR2F6P10588 404 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 POU2F1P14859 743 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 ZNF708P17019 499 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 TNNI3P19429 210 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 HIST1H2ADP20671 130 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 MALP21145 153 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 ZNF10P21506 573 aaPredicted RBP3.29□□□□□ -1.88
RBM39-220ENST00000455343 SAT1P21673 171 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 TBXA2RP21731 343 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 CPOXP36551 454 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 CETN2P41208 172 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 PTGDSP41222 190 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 STARP49675 285 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 PLA2G16P53816 162 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 CLDN15P56746 228 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 CLDN18P56856 261 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 SLC37A1P57057 533 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 FBXW4P57775 412 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 SSBP2P81877 361 aaPredicted RBP3.29□□□□□ -1.88
RBM39-220ENST00000455343 BIKQ13323 160 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 RCN2Q14257 317 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 RBBP5Q15291 538 aaKnown RBP3.29□□□□□ -1.88
RBM39-220ENST00000455343 BCL2A1Q16548 175 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 ZNF470Q6ECI4 717 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 SUMO4Q6EEV6 95 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 CASC4Q6P4E1 433 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 BHLHB9Q6PI77 547 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 SBSNQ6UWP8 590 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 ENPP6Q6UWR7 440 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 TMIGD1Q6UXZ0 262 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 ZNF782Q6ZMW2 699 aaPredicted RBP3.29□□□□□ -1.88
RBM39-220ENST00000455343 ZNF793Q6ZN11 406 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 PRUNE1Q86TP1 453 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 YRDCQ86U90 279 aaKnown RBP3.29□□□□□ -1.88
RBM39-220ENST00000455343 LUZP1Q86V48 1076 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 CAND1Q86VP6 1230 aaKnown RBP3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 761.6 ms