RNA–Protein interactions for RNA: ENST00000453960.6

MECP2-205, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene MECP2, Length 1,729 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-205ENST00000453960 NRMQ8IXM6 262 aa16.91■□□□□ 0.3
MECP2-205ENST00000453960 WSB2Q9NYS7 404 aaPredicted RBP16.91■□□□□ 0.3
MECP2-205ENST00000453960 EXOGQ9Y2C4 368 aaKnown RBP16.91■□□□□ 0.3
MECP2-205ENST00000453960 EXOSC1Q9Y3B2 195 aaKnown RBP16.91■□□□□ 0.3
MECP2-205ENST00000453960 TRAPPC13A5PLN9 417 aa16.9■□□□□ 0.3
MECP2-205ENST00000453960 ZNF860A6NHJ4 632 aa16.9■□□□□ 0.3
MECP2-205ENST00000453960 NTN1O95631 604 aa16.9■□□□□ 0.3
MECP2-205ENST00000453960 HNRNPCP07910 306 aaKnown RBP eCLIP16.9■□□□□ 0.3
MECP2-205ENST00000453960 SLC35E2P0CK97 266 aa16.9■□□□□ 0.3
MECP2-205ENST00000453960 S100A5P33763 92 aa16.9■□□□□ 0.3
MECP2-205ENST00000453960 SOX3P41225 446 aa16.9■□□□□ 0.3
MECP2-205ENST00000453960 MTNR1AP48039 350 aa16.9■□□□□ 0.3
MECP2-205ENST00000453960 CD97P48960 835 aa16.9■□□□□ 0.3
MECP2-205ENST00000453960 WNT4P56705 351 aa16.9■□□□□ 0.3
MECP2-205ENST00000453960 RPS3AP61247 264 aaKnown RBP16.9■□□□□ 0.3
MECP2-205ENST00000453960 PGGHGQ32M88 737 aa16.9■□□□□ 0.3
MECP2-205ENST00000453960 RRM2BQ7LG56 351 aa16.9■□□□□ 0.3
MECP2-205ENST00000453960 SNX29P2Q8IUI4 249 aa16.9■□□□□ 0.3
MECP2-205ENST00000453960 BRIX1Q8TDN6 353 aaKnown RBP16.9■□□□□ 0.3
MECP2-205ENST00000453960 SNRNP27Q8WVK2 155 aaKnown RBP16.9■□□□□ 0.3
MECP2-205ENST00000453960 RNFT2Q96EX2 444 aa16.9■□□□□ 0.3
MECP2-205ENST00000453960 TRMT61AQ96FX7 289 aaKnown RBP16.9■□□□□ 0.3
MECP2-205ENST00000453960 TOE1Q96GM8 510 aaKnown RBP16.9■□□□□ 0.3
MECP2-205ENST00000453960 ZNF649Q9BS31 505 aa16.9■□□□□ 0.3
MECP2-205ENST00000453960 ASPNQ9BXN1 380 aa16.9■□□□□ 0.3
MECP2-205ENST00000453960 C6orf62Q9GZU0 229 aaPredicted RBP16.9■□□□□ 0.3
MECP2-205ENST00000453960 KLHL25Q9H0H3 589 aa16.9■□□□□ 0.3
MECP2-205ENST00000453960 SF3B6Q9Y3B4 125 aaKnown RBP16.9■□□□□ 0.3
MECP2-205ENST00000453960 MN1Q10571 1320 aaPredicted RBP16.9■□□□□ 0.3
MECP2-205ENST00000453960 SLC35F4A4IF30 521 aa16.9■□□□□ 0.3
MECP2-205ENST00000453960 SOX1O00570 391 aaPredicted RBP16.9■□□□□ 0.3
MECP2-205ENST00000453960 BRINP1O60477 761 aa16.9■□□□□ 0.3
MECP2-205ENST00000453960 LDB3O75112 727 aa16.9■□□□□ 0.3
MECP2-205ENST00000453960 GNSP15586 552 aa16.9■□□□□ 0.3
MECP2-205ENST00000453960 HTR2AP28223 471 aa16.9■□□□□ 0.3
MECP2-205ENST00000453960 SHC2P98077 582 aa16.9■□□□□ 0.3
MECP2-205ENST00000453960 HOXC5Q00444 222 aa16.9■□□□□ 0.3
MECP2-205ENST00000453960 PLAURQ03405 335 aa16.9■□□□□ 0.3
MECP2-205ENST00000453960 ACSM1Q08AH1 577 aa16.9■□□□□ 0.3
MECP2-205ENST00000453960 MAP4K2Q12851 820 aa16.9■□□□□ 0.3
MECP2-205ENST00000453960 PRTGQ2VWP7 1150 aa16.9■□□□□ 0.3
MECP2-205ENST00000453960 RANBP3LQ86VV4 465 aaPredicted RBP16.9■□□□□ 0.3
MECP2-205ENST00000453960 MEX3DQ86XN8 651 aaKnown RBP16.9■□□□□ 0.3
MECP2-205ENST00000453960 TMEFF1Q8IYR6 380 aa16.9■□□□□ 0.3
MECP2-205ENST00000453960 SHISA5Q8N114 240 aa16.9■□□□□ 0.3
MECP2-205ENST00000453960 PARP16Q8N5Y8 322 aa16.9■□□□□ 0.3
MECP2-205ENST00000453960 OR5T3Q8NGG3 340 aa16.9■□□□□ 0.3
MECP2-205ENST00000453960 TMEM255BQ8WV15 326 aa16.9■□□□□ 0.3
MECP2-205ENST00000453960 WDFY2Q96P53 400 aa16.9■□□□□ 0.3
MECP2-205ENST00000453960 CACYBPQ9HB71 228 aaKnown RBP16.9■□□□□ 0.3
MECP2-205ENST00000453960 TRAPPC4Q9Y296 219 aa16.9■□□□□ 0.3
MECP2-205ENST00000453960 MTCH2Q9Y6C9 303 aa16.9■□□□□ 0.3
MECP2-205ENST00000453960 TDRD6O60522 2096 aaKnown RBP16.89■□□□□ 0.29
MECP2-205ENST00000453960 PNMA8CA0A1B0GUJ8 204 aa16.89■□□□□ 0.29
MECP2-205ENST00000453960 A0A1W2PPC4 97 aa16.89■□□□□ 0.29
MECP2-205ENST00000453960 CHURC1-FNTBB4DL54 471 aa16.89■□□□□ 0.29
MECP2-205ENST00000453960 HCRTR1O43613 425 aa16.89■□□□□ 0.29
MECP2-205ENST00000453960 CBX7O95931 251 aa16.89■□□□□ 0.29
MECP2-205ENST00000453960 IGHA1P01876 353 aa16.89■□□□□ 0.29
MECP2-205ENST00000453960 HMGN1P05114 100 aa16.89■□□□□ 0.29
MECP2-205ENST00000453960 CT62P0C5K7 136 aa16.89■□□□□ 0.29
MECP2-205ENST00000453960 LIMS3P0CW19 117 aa16.89■□□□□ 0.29
MECP2-205ENST00000453960 LIMS4P0CW20 117 aa16.89■□□□□ 0.29
MECP2-205ENST00000453960 THEGLP0DJG4 465 aa16.89■□□□□ 0.29
MECP2-205ENST00000453960 S1PR1P21453 382 aa16.89■□□□□ 0.29
MECP2-205ENST00000453960 PPP1CAP62136 330 aa16.89■□□□□ 0.29
MECP2-205ENST00000453960 IGLV3-21P80748 117 aaPredicted RBP16.89■□□□□ 0.29
MECP2-205ENST00000453960 ID2Q02363 134 aa16.89■□□□□ 0.29
MECP2-205ENST00000453960 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.89■□□□□ 0.29
MECP2-205ENST00000453960 CD200R1LQ6Q8B3 271 aa16.89■□□□□ 0.29
MECP2-205ENST00000453960 GRAMD2AQ8IUY3 354 aa16.89■□□□□ 0.29
MECP2-205ENST00000453960 ZNF687Q8N1G0 1237 aa16.89■□□□□ 0.29
MECP2-205ENST00000453960 CACTIN-AS1Q8N1I8 211 aa16.89■□□□□ 0.29
MECP2-205ENST00000453960 TM9SF4Q92544 642 aa16.89■□□□□ 0.29
MECP2-205ENST00000453960 RFKQ969G6 155 aa16.89■□□□□ 0.29
MECP2-205ENST00000453960 ITPKCQ96DU7 683 aa16.89■□□□□ 0.29
MECP2-205ENST00000453960 LMF2Q9BU23 707 aaKnown RBP16.89■□□□□ 0.29
MECP2-205ENST00000453960 BARHL1Q9BZE3 327 aa16.89■□□□□ 0.29
MECP2-205ENST00000453960 UCK1Q9HA47 277 aa16.89■□□□□ 0.29
MECP2-205ENST00000453960 CPNE5Q9HCH3 593 aa16.89■□□□□ 0.29
MECP2-205ENST00000453960 FAM60AQ9NP50 221 aa16.89■□□□□ 0.29
MECP2-205ENST00000453960 ADAP2Q9NPF8 381 aa16.89■□□□□ 0.29
MECP2-205ENST00000453960 KRCC1Q9NPI7 259 aaPredicted RBP16.89■□□□□ 0.29
MECP2-205ENST00000453960 CRNNQ9UBG3 495 aaPredicted RBP16.89■□□□□ 0.29
MECP2-205ENST00000453960 FBXL21Q9UKT6 434 aa16.89■□□□□ 0.29
MECP2-205ENST00000453960 MED26O95402 600 aa16.88■□□□□ 0.29
MECP2-205ENST00000453960 MYL12AP19105 171 aa16.88■□□□□ 0.29
MECP2-205ENST00000453960 POU3F3P20264 500 aaPredicted RBP16.88■□□□□ 0.29
MECP2-205ENST00000453960 NT5EP21589 574 aa16.88■□□□□ 0.29
MECP2-205ENST00000453960 RPS19P39019 145 aaKnown RBP16.88■□□□□ 0.29
MECP2-205ENST00000453960 BLKP51451 505 aa16.88■□□□□ 0.29
MECP2-205ENST00000453960 COL9A2Q14055 689 aaPredicted RBP16.88■□□□□ 0.29
MECP2-205ENST00000453960 PLK5Q496M5 336 aa16.88■□□□□ 0.29
MECP2-205ENST00000453960 CCNJQ5T5M9 372 aa16.88■□□□□ 0.29
MECP2-205ENST00000453960 MRPL2Q5T653 305 aaKnown RBP16.88■□□□□ 0.29
MECP2-205ENST00000453960 NXNL2Q5VZ03 156 aa16.88■□□□□ 0.29
MECP2-205ENST00000453960 SYT13Q7L8C5 426 aa16.88■□□□□ 0.29
MECP2-205ENST00000453960 TAF8Q7Z7C8 310 aa16.88■□□□□ 0.29
MECP2-205ENST00000453960 COX18Q8N8Q8 333 aa16.88■□□□□ 0.29
MECP2-205ENST00000453960 OR9Q1Q8NGQ5 310 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms