RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 SOAT1P35610 550 aa14.79□□□□□ -0.04
SNX17-204ENST00000453453 CDKN2CP42773 168 aa14.79□□□□□ -0.04
SNX17-204ENST00000453453 COL9A2Q14055 689 aaPredicted RBP14.79□□□□□ -0.04
SNX17-204ENST00000453453 PRSS53Q2L4Q9 553 aa14.79□□□□□ -0.04
SNX17-204ENST00000453453 MPEG1Q2M385 716 aa14.79□□□□□ -0.04
SNX17-204ENST00000453453 GTDC1Q4AE62 458 aa14.79□□□□□ -0.04
SNX17-204ENST00000453453 PRAMEF17Q5VTA0 474 aa14.79□□□□□ -0.04
SNX17-204ENST00000453453 CDCP2Q5VXM1 449 aa14.79□□□□□ -0.04
SNX17-204ENST00000453453 PWWP2BQ6NUJ5 590 aa14.79□□□□□ -0.04
SNX17-204ENST00000453453 C19orf48Q6RUI8 117 aa14.79□□□□□ -0.04
SNX17-204ENST00000453453 GPR155Q7Z3F1 870 aa14.79□□□□□ -0.04
SNX17-204ENST00000453453 KRT73Q86Y46 540 aa14.79□□□□□ -0.04
SNX17-204ENST00000453453 ZZZ3Q8IYH5 903 aa14.79□□□□□ -0.04
SNX17-204ENST00000453453 ASCC1Q8N9N2 400 aaKnown RBP14.79□□□□□ -0.04
SNX17-204ENST00000453453 ATG16L2Q8NAA4 619 aa14.79□□□□□ -0.04
SNX17-204ENST00000453453 FAM83FQ8NEG4 500 aaPredicted RBP14.79□□□□□ -0.04
SNX17-204ENST00000453453 UCN3Q969E3 161 aa14.79□□□□□ -0.04
SNX17-204ENST00000453453 TRIM63Q969Q1 353 aa14.79□□□□□ -0.04
SNX17-204ENST00000453453 SLA2Q9H6Q3 261 aa14.79□□□□□ -0.04
SNX17-204ENST00000453453 ZBTB20Q9HC78 741 aaPredicted RBP14.79□□□□□ -0.04
SNX17-204ENST00000453453 SEMA3GQ9NS98 782 aa14.79□□□□□ -0.04
SNX17-204ENST00000453453 SLC39A1Q9NY26 324 aa14.79□□□□□ -0.04
SNX17-204ENST00000453453 ENOPH1Q9UHY7 261 aa14.79□□□□□ -0.04
SNX17-204ENST00000453453 MAP4K5Q9Y4K4 846 aa14.79□□□□□ -0.04
SNX17-204ENST00000453453 PCDHGA6Q9Y5G7 932 aa14.79□□□□□ -0.04
SNX17-204ENST00000453453 MAU2Q9Y6X3 613 aa14.79□□□□□ -0.04
SNX17-204ENST00000453453 HYAL3O43820 417 aaPredicted RBP14.78□□□□□ -0.04
SNX17-204ENST00000453453 CSO75390 466 aaKnown RBP14.78□□□□□ -0.04
SNX17-204ENST00000453453 ZNF682O95780 498 aa14.78□□□□□ -0.04
SNX17-204ENST00000453453 GPR75O95800 540 aa14.78□□□□□ -0.04
SNX17-204ENST00000453453 FHP07954 510 aa14.78□□□□□ -0.04
SNX17-204ENST00000453453 DBTP11182 482 aaKnown RBP14.78□□□□□ -0.04
SNX17-204ENST00000453453 CYP4B1P13584 511 aa14.78□□□□□ -0.04
SNX17-204ENST00000453453 GPX2P18283 190 aa14.78□□□□□ -0.04
SNX17-204ENST00000453453 KDELR2P33947 212 aa14.78□□□□□ -0.04
SNX17-204ENST00000453453 NR4A2P43354 598 aa14.78□□□□□ -0.04
SNX17-204ENST00000453453 XCR1P46094 333 aa14.78□□□□□ -0.04
SNX17-204ENST00000453453 HTR3AP46098 478 aa14.78□□□□□ -0.04
SNX17-204ENST00000453453 OR1D4P47884 311 aa14.78□□□□□ -0.04
SNX17-204ENST00000453453 XKP51811 444 aa14.78□□□□□ -0.04
SNX17-204ENST00000453453 OR2B6P58173 313 aa14.78□□□□□ -0.04
SNX17-204ENST00000453453 HBA1P69905 142 aa14.78□□□□□ -0.04
SNX17-204ENST00000453453 MAT1AQ00266 395 aaKnown RBP14.78□□□□□ -0.04
SNX17-204ENST00000453453 CHRNEQ04844 493 aa14.78□□□□□ -0.04
SNX17-204ENST00000453453 HSPB3Q12988 150 aa14.78□□□□□ -0.04
SNX17-204ENST00000453453 CAMK2BQ13554 666 aa14.78□□□□□ -0.04
SNX17-204ENST00000453453 ISXQ2M1V0 245 aa14.78□□□□□ -0.04
SNX17-204ENST00000453453 C6orf183Q5T699 404 aa14.78□□□□□ -0.04
SNX17-204ENST00000453453 C1orf189Q5VU69 101 aa14.78□□□□□ -0.04
SNX17-204ENST00000453453 FAM180BQ6P0A1 224 aa14.78□□□□□ -0.04
SNX17-204ENST00000453453 CEACAM20Q6UY09 585 aa14.78□□□□□ -0.04
SNX17-204ENST00000453453 ASCL5Q7RTU5 278 aa14.78□□□□□ -0.04
SNX17-204ENST00000453453 CCDC71Q8IV32 467 aaPredicted RBP14.78□□□□□ -0.04
SNX17-204ENST00000453453 LRRC25Q8N386 305 aaPredicted RBP14.78□□□□□ -0.04
SNX17-204ENST00000453453 BMPERQ8N8U9 685 aa14.78□□□□□ -0.04
SNX17-204ENST00000453453 GRPEL2Q8TAA5 225 aa14.78□□□□□ -0.04
SNX17-204ENST00000453453 LIN37Q96GY3 246 aaPredicted RBP14.78□□□□□ -0.04
SNX17-204ENST00000453453 AMDHD1Q96NU7 426 aa14.78□□□□□ -0.04
SNX17-204ENST00000453453 OR1F2PQ96R84 312 aa14.78□□□□□ -0.04
SNX17-204ENST00000453453 PRTFDC1Q9NRG1 225 aa14.78□□□□□ -0.04
SNX17-204ENST00000453453 THUMPD1Q9NXG2 353 aaKnown RBP14.78□□□□□ -0.04
SNX17-204ENST00000453453 TRPC4Q9UBN4 977 aa14.78□□□□□ -0.04
SNX17-204ENST00000453453 LOXL2Q9Y4K0 774 aa14.78□□□□□ -0.04
SNX17-204ENST00000453453 PCDHGB3Q9Y5G1 929 aa14.78□□□□□ -0.04
SNX17-204ENST00000453453 SCN2AQ99250 2005 aa14.78□□□□□ -0.04
SNX17-204ENST00000453453 EP300Q09472 2414 aaPredicted RBP14.78□□□□□ -0.04
SNX17-204ENST00000453453 FRYLO94915 3013 aa14.78□□□□□ -0.04
SNX17-204ENST00000453453 NUP210LQ5VU65 1888 aa14.78□□□□□ -0.04
SNX17-204ENST00000453453 FAM227AF5H4B4 570 aa14.77□□□□□ -0.04
SNX17-204ENST00000453453 CPNE3O75131 537 aaKnown RBP14.77□□□□□ -0.04
SNX17-204ENST00000453453 C8orf89P0DMQ9 161 aa14.77□□□□□ -0.04
SNX17-204ENST00000453453 CSRP1P21291 193 aaKnown RBP14.77□□□□□ -0.04
SNX17-204ENST00000453453 UQCRC2P22695 453 aa14.77□□□□□ -0.04
SNX17-204ENST00000453453 CHI3L1P36222 383 aaPredicted RBP14.77□□□□□ -0.04
SNX17-204ENST00000453453 FEN1P39748 380 aaKnown RBP14.77□□□□□ -0.04
SNX17-204ENST00000453453 PPP1R8Q12972 351 aaKnown RBP14.77□□□□□ -0.04
SNX17-204ENST00000453453 EIF3IQ13347 325 aaKnown RBP14.77□□□□□ -0.04
SNX17-204ENST00000453453 ELOAQ14241 798 aaKnown RBP14.77□□□□□ -0.04
SNX17-204ENST00000453453 CDK10Q15131 360 aa14.77□□□□□ -0.04
SNX17-204ENST00000453453 SYT16Q17RD7 645 aa14.77□□□□□ -0.04
SNX17-204ENST00000453453 SPDYE7PQ495Y7 208 aa14.77□□□□□ -0.04
SNX17-204ENST00000453453 DHRS13Q6UX07 377 aa14.77□□□□□ -0.04
SNX17-204ENST00000453453 GDPGP1Q6ZNW5 385 aa14.77□□□□□ -0.04
SNX17-204ENST00000453453 ZNF551Q7Z340 670 aaPredicted RBP14.77□□□□□ -0.04
SNX17-204ENST00000453453 ZNF675Q8TD23 568 aa14.77□□□□□ -0.04
SNX17-204ENST00000453453 CNRIP1Q96F85 164 aaPredicted RBP14.77□□□□□ -0.04
SNX17-204ENST00000453453 BARD1Q99728 777 aaKnown RBP14.77□□□□□ -0.04
SNX17-204ENST00000453453 RBCK1Q9BYM8 510 aa14.77□□□□□ -0.04
SNX17-204ENST00000453453 GLIPR2Q9H4G4 154 aa14.77□□□□□ -0.04
SNX17-204ENST00000453453 APMAPQ9HDC9 416 aa14.77□□□□□ -0.04
SNX17-204ENST00000453453 MKKSQ9NPJ1 570 aaPredicted RBP14.77□□□□□ -0.04
SNX17-204ENST00000453453 SLAMF7Q9NQ25 335 aa14.77□□□□□ -0.04
SNX17-204ENST00000453453 TOR4AQ9NXH8 423 aa14.77□□□□□ -0.04
SNX17-204ENST00000453453 CNOT2Q9NZN8 540 aaKnown RBP14.77□□□□□ -0.04
SNX17-204ENST00000453453 POFUT2Q9Y2G5 429 aa14.77□□□□□ -0.04
SNX17-204ENST00000453453 PADI2Q9Y2J8 665 aa14.77□□□□□ -0.04
SNX17-204ENST00000453453 SNX8Q9Y5X2 465 aa14.77□□□□□ -0.04
SNX17-204ENST00000453453 NUP214P35658 2090 aaPredicted RBP14.77□□□□□ -0.05
SNX17-204ENST00000453453 WASHC1A8K0Z3 465 aa14.77□□□□□ -0.05
SNX17-204ENST00000453453 FAM25AB3EWG3 89 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms