RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 UGT3A2Q3SY77 523 aa11.66□□□□□ -0.54
CHD3-206ENST00000452447 ATP6AP1LQ52LC2 224 aa11.66□□□□□ -0.54
CHD3-206ENST00000452447 OR2A2Q6IF42 318 aa11.66□□□□□ -0.54
CHD3-206ENST00000452447 LRIG3Q6UXM1 1119 aa11.66□□□□□ -0.54
CHD3-206ENST00000452447 AENQ8WTP8 325 aaKnown RBP11.66□□□□□ -0.54
CHD3-206ENST00000452447 MS4A4EQ96PG1 132 aa11.66□□□□□ -0.54
CHD3-206ENST00000452447 PIGQQ9BRB3 760 aa11.66□□□□□ -0.54
CHD3-206ENST00000452447 PIGMQ9H3S5 423 aa11.66□□□□□ -0.54
CHD3-206ENST00000452447 HHATLQ9HCP6 504 aa11.66□□□□□ -0.54
CHD3-206ENST00000452447 CLCF1Q9UBD9 225 aa11.66□□□□□ -0.54
CHD3-206ENST00000452447 ZNF469Q96JG9 3925 aaPredicted RBP11.65□□□□□ -0.54
CHD3-206ENST00000452447 EMC8O43402 210 aa11.65□□□□□ -0.54
CHD3-206ENST00000452447 GMFGO60234 142 aa11.65□□□□□ -0.54
CHD3-206ENST00000452447 PEX11AO75192 247 aa11.65□□□□□ -0.54
CHD3-206ENST00000452447 NKX2-2O95096 273 aa11.65□□□□□ -0.54
CHD3-206ENST00000452447 TGM6O95932 706 aa11.65□□□□□ -0.54
CHD3-206ENST00000452447 EPXP11678 715 aa11.65□□□□□ -0.54
CHD3-206ENST00000452447 FRKP42685 505 aaPredicted RBP11.65□□□□□ -0.54
CHD3-206ENST00000452447 ART1P52961 327 aa11.65□□□□□ -0.54
CHD3-206ENST00000452447 GRAMD1BQ3KR37 738 aa11.65□□□□□ -0.54
CHD3-206ENST00000452447 EXOC3L1Q86VI1 746 aa11.65□□□□□ -0.54
CHD3-206ENST00000452447 OR5M1Q8NGP8 315 aa11.65□□□□□ -0.54
CHD3-206ENST00000452447 PPP1R14CQ8TAE6 165 aa11.65□□□□□ -0.54
CHD3-206ENST00000452447 LINC01560Q8TB33 94 aa11.65□□□□□ -0.54
CHD3-206ENST00000452447 FBXO30Q8TB52 745 aa11.65□□□□□ -0.54
CHD3-206ENST00000452447 JADE3Q92613 823 aa11.65□□□□□ -0.54
CHD3-206ENST00000452447 C1GALT1C1Q96EU7 318 aa11.65□□□□□ -0.54
CHD3-206ENST00000452447 RTN4RQ9BZR6 473 aa11.65□□□□□ -0.54
CHD3-206ENST00000452447 NTMQ9P121 344 aa11.65□□□□□ -0.54
CHD3-206ENST00000452447 STOML1Q9UBI4 398 aa11.65□□□□□ -0.54
CHD3-206ENST00000452447 ZNF337Q9Y3M9 751 aa11.65□□□□□ -0.54
CHD3-206ENST00000452447 VPS13CQ709C8 3753 aa11.65□□□□□ -0.54
CHD3-206ENST00000452447 FAM221AA4D161 298 aa11.64□□□□□ -0.55
CHD3-206ENST00000452447 SLC22A20A6NK97 555 aa11.64□□□□□ -0.55
CHD3-206ENST00000452447 H3BML4 177 aa11.64□□□□□ -0.55
CHD3-206ENST00000452447 SEC14L5O43304 696 aa11.64□□□□□ -0.55
CHD3-206ENST00000452447 HCRTR2O43614 444 aa11.64□□□□□ -0.55
CHD3-206ENST00000452447 NDUFB5O43674 189 aa11.64□□□□□ -0.55
CHD3-206ENST00000452447 IGKV1D-16P01601 117 aa11.64□□□□□ -0.55
CHD3-206ENST00000452447 ALOX5P09917 674 aa11.64□□□□□ -0.55
CHD3-206ENST00000452447 HPGDP15428 266 aa11.64□□□□□ -0.55
CHD3-206ENST00000452447 EFNA1P20827 205 aaPredicted RBP11.64□□□□□ -0.55
CHD3-206ENST00000452447 IST1P53990 364 aa11.64□□□□□ -0.55
CHD3-206ENST00000452447 DAZAP2Q15038 168 aaPredicted RBP11.64□□□□□ -0.55
CHD3-206ENST00000452447 GLYR1Q49A26 553 aaPredicted RBP11.64□□□□□ -0.55
CHD3-206ENST00000452447 MFSD12Q6NUT3 480 aa11.64□□□□□ -0.55
CHD3-206ENST00000452447 WDR93Q6P2C0 686 aa11.64□□□□□ -0.55
CHD3-206ENST00000452447 ZCCHC12Q6PEW1 402 aa11.64□□□□□ -0.55
CHD3-206ENST00000452447 GALNT10Q86SR1 603 aa11.64□□□□□ -0.55
CHD3-206ENST00000452447 COX18Q8N8Q8 333 aa11.64□□□□□ -0.55
CHD3-206ENST00000452447 FNDC5Q8NAU1 212 aa11.64□□□□□ -0.55
CHD3-206ENST00000452447 SLC16A11Q8NCK7 471 aa11.64□□□□□ -0.55
CHD3-206ENST00000452447 HOXB13Q92826 284 aaPredicted RBP11.64□□□□□ -0.55
CHD3-206ENST00000452447 NINJ1Q92982 152 aa11.64□□□□□ -0.55
CHD3-206ENST00000452447 CAVIN3Q969G5 261 aa11.64□□□□□ -0.55
CHD3-206ENST00000452447 CHMP6Q96FZ7 201 aa11.64□□□□□ -0.55
CHD3-206ENST00000452447 YIPF4Q9BSR8 244 aa11.64□□□□□ -0.55
CHD3-206ENST00000452447 PINK1Q9BXM7 581 aa11.64□□□□□ -0.55
CHD3-206ENST00000452447 ATAD3AQ9NVI7 634 aa11.64□□□□□ -0.55
CHD3-206ENST00000452447 GALNT8Q9NY28 637 aa11.64□□□□□ -0.55
CHD3-206ENST00000452447 GIMAP2Q9UG22 337 aa11.64□□□□□ -0.55
CHD3-206ENST00000452447 PACSIN3Q9UKS6 424 aa11.64□□□□□ -0.55
CHD3-206ENST00000452447 SNX8Q9Y5X2 465 aa11.64□□□□□ -0.55
CHD3-206ENST00000452447 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.63□□□□□ -0.55
CHD3-206ENST00000452447 A0A1W2PRB8 838 aa11.63□□□□□ -0.55
CHD3-206ENST00000452447 OR2M5A3KFT3 312 aa11.63□□□□□ -0.55
CHD3-206ENST00000452447 ALG1L2C9J202 215 aa11.63□□□□□ -0.55
CHD3-206ENST00000452447 SCAMP2O15127 329 aaKnown RBP11.63□□□□□ -0.55
CHD3-206ENST00000452447 SKAP2O75563 359 aaPredicted RBP11.63□□□□□ -0.55
CHD3-206ENST00000452447 KCNK2O95069 426 aa11.63□□□□□ -0.55
CHD3-206ENST00000452447 CRHP06850 196 aa11.63□□□□□ -0.55
CHD3-206ENST00000452447 BPGMP07738 259 aa11.63□□□□□ -0.55
CHD3-206ENST00000452447 CREB1P16220 341 aa11.63□□□□□ -0.55
CHD3-206ENST00000452447 MAP3K8P41279 467 aa11.63□□□□□ -0.55
CHD3-206ENST00000452447 SERPINB4P48594 390 aa11.63□□□□□ -0.55
CHD3-206ENST00000452447 PRIM2P49643 509 aa11.63□□□□□ -0.55
CHD3-206ENST00000452447 RPS3AP61247 264 aaKnown RBP11.63□□□□□ -0.55
CHD3-206ENST00000452447 MLC1Q15049 377 aa11.63□□□□□ -0.55
CHD3-206ENST00000452447 XKR7Q5GH72 579 aa11.63□□□□□ -0.55
CHD3-206ENST00000452447 CPTPQ5TA50 214 aa11.63□□□□□ -0.55
CHD3-206ENST00000452447 FIGNL1Q6PIW4 674 aa11.63□□□□□ -0.55
CHD3-206ENST00000452447 APOOLQ6UXV4 268 aa11.63□□□□□ -0.55
CHD3-206ENST00000452447 CDC20BQ86Y33 519 aa11.63□□□□□ -0.55
CHD3-206ENST00000452447 NUDCD3Q8IVD9 361 aa11.63□□□□□ -0.55
CHD3-206ENST00000452447 NATD1Q8N6N6 113 aa11.63□□□□□ -0.55
CHD3-206ENST00000452447 CNEP1R1Q8N9A8 125 aa11.63□□□□□ -0.55
CHD3-206ENST00000452447 OR6Y1Q8NGX8 325 aa11.63□□□□□ -0.55
CHD3-206ENST00000452447 SMPDL3BQ92485 455 aa11.63□□□□□ -0.55
CHD3-206ENST00000452447 GIMAP5Q96F15 307 aa11.63□□□□□ -0.55
CHD3-206ENST00000452447 PRPF18Q99633 342 aaKnown RBP11.63□□□□□ -0.55
CHD3-206ENST00000452447 C1orf50Q9BV19 199 aa11.63□□□□□ -0.55
CHD3-206ENST00000452447 ZCCHC3Q9NUD5 404 aaKnown RBP11.63□□□□□ -0.55
CHD3-206ENST00000452447 ATP6V1HQ9UI12 483 aa11.63□□□□□ -0.55
CHD3-206ENST00000452447 ZDHHC2Q9UIJ5 367 aa11.63□□□□□ -0.55
CHD3-206ENST00000452447 ST6GALNAC2Q9UJ37 374 aa11.63□□□□□ -0.55
CHD3-206ENST00000452447 VDAC3Q9Y277 283 aa11.63□□□□□ -0.55
CHD3-206ENST00000452447 ACANP16112 2415 aa11.63□□□□□ -0.55
CHD3-206ENST00000452447 IGLV3-32A0A0A0MS00 114 aa11.62□□□□□ -0.55
CHD3-206ENST00000452447 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.62□□□□□ -0.55
CHD3-206ENST00000452447 A0A1W2PNV4 684 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms