RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 STX5Q13190 355 aa9.79□□□□□ -0.84
USP1-204ENST00000452143 WHAMMP3Q1A5X7 153 aa9.79□□□□□ -0.84
USP1-204ENST00000452143 BEX5Q5H9J7 111 aa9.79□□□□□ -0.84
USP1-204ENST00000452143 TMEM107Q6UX40 140 aa9.79□□□□□ -0.84
USP1-204ENST00000452143 MMGT1Q8N4V1 131 aa9.79□□□□□ -0.84
USP1-204ENST00000452143 OR6K3Q8NGY3 331 aa9.79□□□□□ -0.84
USP1-204ENST00000452143 PPP1R14CQ8TAE6 165 aa9.79□□□□□ -0.84
USP1-204ENST00000452143 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.79□□□□□ -0.84
USP1-204ENST00000452143 PERPQ96FX8 193 aa9.79□□□□□ -0.84
USP1-204ENST00000452143 TBL1XR1Q9BZK7 514 aa9.79□□□□□ -0.84
USP1-204ENST00000452143 C3orf14Q9HBI5 128 aa9.79□□□□□ -0.84
USP1-204ENST00000452143 FANCFQ9NPI8 374 aa9.79□□□□□ -0.84
USP1-204ENST00000452143 PAQR5Q9NXK6 330 aaPredicted RBP9.79□□□□□ -0.84
USP1-204ENST00000452143 MED11Q9P086 117 aa9.79□□□□□ -0.84
USP1-204ENST00000452143 DMGDHQ9UI17 866 aaKnown RBP9.79□□□□□ -0.84
USP1-204ENST00000452143 EMC9Q9Y3B6 208 aa9.79□□□□□ -0.84
USP1-204ENST00000452143 SONP18583 2426 aaKnown RBP9.79□□□□□ -0.84
USP1-204ENST00000452143 UQCRHLA0A096LP55 91 aa9.78□□□□□ -0.84
USP1-204ENST00000452143 RSL1D1O76021 490 aaKnown RBP9.78□□□□□ -0.84
USP1-204ENST00000452143 KCNH1O95259 989 aa9.78□□□□□ -0.84
USP1-204ENST00000452143 ANGPTL1O95841 491 aa9.78□□□□□ -0.84
USP1-204ENST00000452143 GSTA1P08263 222 aa9.78□□□□□ -0.84
USP1-204ENST00000452143 PAX1P15863 534 aa9.78□□□□□ -0.84
USP1-204ENST00000452143 TBXA2RP21731 343 aa9.78□□□□□ -0.84
USP1-204ENST00000452143 LOXP28300 417 aaPredicted RBP9.78□□□□□ -0.84
USP1-204ENST00000452143 PTH2RP49190 550 aa9.78□□□□□ -0.84
USP1-204ENST00000452143 C2orf80Q0P641 193 aa9.78□□□□□ -0.84
USP1-204ENST00000452143 SGCBQ16585 318 aa9.78□□□□□ -0.84
USP1-204ENST00000452143 IMPG1Q17R60 797 aa9.78□□□□□ -0.84
USP1-204ENST00000452143 TMEM44Q2T9K0 475 aa9.78□□□□□ -0.84
USP1-204ENST00000452143 SPDYAQ5MJ70 313 aa9.78□□□□□ -0.84
USP1-204ENST00000452143 FAM71E1Q6IPT2 247 aa9.78□□□□□ -0.84
USP1-204ENST00000452143 ZNF550Q7Z398 422 aa9.78□□□□□ -0.84
USP1-204ENST00000452143 GGNQ86UU5 652 aa9.78□□□□□ -0.84
USP1-204ENST00000452143 CIARTQ8N365 385 aaPredicted RBP9.78□□□□□ -0.84
USP1-204ENST00000452143 ZNF610Q8N9Z0 462 aa9.78□□□□□ -0.84
USP1-204ENST00000452143 CDC26Q8NHZ8 85 aa9.78□□□□□ -0.84
USP1-204ENST00000452143 ACMSDQ8TDX5 336 aa9.78□□□□□ -0.84
USP1-204ENST00000452143 IGFBPL1Q8WX77 278 aa9.78□□□□□ -0.84
USP1-204ENST00000452143 CCDC126Q96EE4 140 aa9.78□□□□□ -0.84
USP1-204ENST00000452143 ZNF764Q96H86 408 aaPredicted RBP9.78□□□□□ -0.84
USP1-204ENST00000452143 GMPPAQ96IJ6 420 aaPredicted RBP9.78□□□□□ -0.84
USP1-204ENST00000452143 METTL2AQ96IZ6 378 aaKnown RBP9.78□□□□□ -0.84
USP1-204ENST00000452143 AMDHD1Q96NU7 426 aa9.78□□□□□ -0.84
USP1-204ENST00000452143 KCNA7Q96RP8 456 aa9.78□□□□□ -0.84
USP1-204ENST00000452143 RTN4RQ9BZR6 473 aa9.78□□□□□ -0.84
USP1-204ENST00000452143 OR10A4Q9H209 315 aa9.78□□□□□ -0.84
USP1-204ENST00000452143 GLIPR2Q9H4G4 154 aa9.78□□□□□ -0.84
USP1-204ENST00000452143 GSTO2Q9H4Y5 243 aa9.78□□□□□ -0.84
USP1-204ENST00000452143 MID1IP1Q9NPA3 183 aa9.78□□□□□ -0.84
USP1-204ENST00000452143 GLRX2Q9NS18 164 aa9.78□□□□□ -0.84
USP1-204ENST00000452143 FLRT3Q9NZU0 649 aa9.78□□□□□ -0.84
USP1-204ENST00000452143 TIMM22Q9Y584 194 aa9.78□□□□□ -0.84
USP1-204ENST00000452143 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.78□□□□□ -0.84
USP1-204ENST00000452143 USF3Q68DE3 2245 aa9.78□□□□□ -0.84
USP1-204ENST00000452143 A0A087WZY1 265 aa9.77□□□□□ -0.85
USP1-204ENST00000452143 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.77□□□□□ -0.85
USP1-204ENST00000452143 C7orf72A4D263 438 aa9.77□□□□□ -0.85
USP1-204ENST00000452143 SS18L1O75177 396 aaPredicted RBP9.77□□□□□ -0.85
USP1-204ENST00000452143 AQP8O94778 261 aa9.77□□□□□ -0.85
USP1-204ENST00000452143 UTS2O95399 124 aa9.77□□□□□ -0.85
USP1-204ENST00000452143 PLGP00747 810 aaPredicted RBP9.77□□□□□ -0.85
USP1-204ENST00000452143 NGFRP08138 427 aa9.77□□□□□ -0.85
USP1-204ENST00000452143 GCAP28676 217 aa9.77□□□□□ -0.85
USP1-204ENST00000452143 EIF1AXP47813 144 aaKnown RBP9.77□□□□□ -0.85
USP1-204ENST00000452143 BTKQ06187 659 aa9.77□□□□□ -0.85
USP1-204ENST00000452143 VPS26BQ4G0F5 336 aa9.77□□□□□ -0.85
USP1-204ENST00000452143 GLE1Q53GS7 698 aaKnown RBP9.77□□□□□ -0.85
USP1-204ENST00000452143 PLEKHM3Q6ZWE6 761 aa9.77□□□□□ -0.85
USP1-204ENST00000452143 TRIM46Q7Z4K8 759 aa9.77□□□□□ -0.85
USP1-204ENST00000452143 MARCH3Q86UD3 253 aa9.77□□□□□ -0.85
USP1-204ENST00000452143 C17orf53Q8N3J3 647 aaPredicted RBP9.77□□□□□ -0.85
USP1-204ENST00000452143 OR5M1Q8NGP8 315 aa9.77□□□□□ -0.85
USP1-204ENST00000452143 DUSP19Q8WTR2 217 aa9.77□□□□□ -0.85
USP1-204ENST00000452143 IFT81Q8WYA0 676 aa9.77□□□□□ -0.85
USP1-204ENST00000452143 HOXB13Q92826 284 aaPredicted RBP9.77□□□□□ -0.85
USP1-204ENST00000452143 ZBTB8AQ96BR9 441 aa9.77□□□□□ -0.85
USP1-204ENST00000452143 ELP4Q96EB1 424 aa9.77□□□□□ -0.85
USP1-204ENST00000452143 ZC3HAV1LQ96H79 300 aaKnown RBP9.77□□□□□ -0.85
USP1-204ENST00000452143 KLHL4Q9C0H6 718 aa9.77□□□□□ -0.85
USP1-204ENST00000452143 IQCGQ9H095 443 aaKnown RBP9.77□□□□□ -0.85
USP1-204ENST00000452143 CXorf56Q9H5V9 222 aa9.77□□□□□ -0.85
USP1-204ENST00000452143 PLSCR4Q9NRQ2 329 aa9.77□□□□□ -0.85
USP1-204ENST00000452143 MCTS1Q9ULC4 181 aaKnown RBP9.77□□□□□ -0.85
USP1-204ENST00000452143 TRIM64A6NGJ6 449 aa9.76□□□□□ -0.85
USP1-204ENST00000452143 TRIM64BA6NI03 449 aa9.76□□□□□ -0.85
USP1-204ENST00000452143 ALG1L2C9J202 215 aa9.76□□□□□ -0.85
USP1-204ENST00000452143 EIF1AYO14602 144 aaKnown RBP9.76□□□□□ -0.85
USP1-204ENST00000452143 URI1O94763 535 aaPredicted RBP9.76□□□□□ -0.85
USP1-204ENST00000452143 CNOT4O95628 575 aaKnown RBP9.76□□□□□ -0.85
USP1-204ENST00000452143 IL11P20809 199 aa9.76□□□□□ -0.85
USP1-204ENST00000452143 RFX3P48380 749 aa9.76□□□□□ -0.85
USP1-204ENST00000452143 FOXA1P55317 472 aa9.76□□□□□ -0.85
USP1-204ENST00000452143 CTBP2P56545 445 aa9.76□□□□□ -0.85
USP1-204ENST00000452143 PPP2R2BQ00005 443 aa9.76□□□□□ -0.85
USP1-204ENST00000452143 PRSS53Q2L4Q9 553 aa9.76□□□□□ -0.85
USP1-204ENST00000452143 EXOC3L2Q2M3D2 409 aa9.76□□□□□ -0.85
USP1-204ENST00000452143 NOXRED1Q6NXP6 359 aa9.76□□□□□ -0.85
USP1-204ENST00000452143 ZNF704Q6ZNC4 412 aaPredicted RBP9.76□□□□□ -0.85
USP1-204ENST00000452143 BEND4Q6ZU67 534 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms