RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, human

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX3-209	ENST00000451859	CRIM1	Q9NZV1	1036 aa		7.86	□□□□□ -1.15
RFX3-209	ENST00000451859	WBP11	Q9Y2W2	641 aa	Known RBP	7.86	□□□□□ -1.15
RFX3-209	ENST00000451859	DNAJC15	Q9Y5T4	150 aa		7.86	□□□□□ -1.15
RFX3-209	ENST00000451859	ITPR3	Q14573	2671 aa		7.85	□□□□□ -1.15
RFX3-209	ENST00000451859	MBD3L4	A6NDZ8	208 aa	Predicted RBP	7.85	□□□□□ -1.15
RFX3-209	ENST00000451859	MBD3L3	A6NE82	208 aa	Predicted RBP	7.85	□□□□□ -1.15
RFX3-209	ENST00000451859	MBD3L5	A6NJ08	208 aa	Predicted RBP	7.85	□□□□□ -1.15
RFX3-209	ENST00000451859		H0YC42	278 aa		7.85	□□□□□ -1.15
RFX3-209	ENST00000451859		H3BML4	177 aa		7.85	□□□□□ -1.15
RFX3-209	ENST00000451859	FADS1	O60427	444 aa		7.85	□□□□□ -1.15
RFX3-209	ENST00000451859	LYPLA1	O75608	230 aa	Predicted RBP	7.85	□□□□□ -1.15
RFX3-209	ENST00000451859	KCNH1	O95259	989 aa		7.85	□□□□□ -1.15
RFX3-209	ENST00000451859	UTS2	O95399	124 aa		7.85	□□□□□ -1.15
RFX3-209	ENST00000451859	PSMG1	O95456	288 aa		7.85	□□□□□ -1.15
RFX3-209	ENST00000451859	IL33	O95760	270 aa		7.85	□□□□□ -1.15
RFX3-209	ENST00000451859	IGKV1D-16	P01601	117 aa		7.85	□□□□□ -1.15
RFX3-209	ENST00000451859	ACP2	P11117	423 aa		7.85	□□□□□ -1.15
RFX3-209	ENST00000451859	PRPS2	P11908	318 aa		7.85	□□□□□ -1.15
RFX3-209	ENST00000451859	BCKDHA	P12694	445 aa		7.85	□□□□□ -1.15
RFX3-209	ENST00000451859	CPN1	P15169	458 aa		7.85	□□□□□ -1.15
RFX3-209	ENST00000451859	HOXB4	P17483	251 aa	Predicted RBP	7.85	□□□□□ -1.15
RFX3-209	ENST00000451859	POU3F2	P20265	443 aa	Predicted RBP	7.85	□□□□□ -1.15
RFX3-209	ENST00000451859	CTSS	P25774	331 aa		7.85	□□□□□ -1.15
RFX3-209	ENST00000451859	ARRB2	P32121	409 aa		7.85	□□□□□ -1.15
RFX3-209	ENST00000451859	CPOX	P36551	454 aa		7.85	□□□□□ -1.15
RFX3-209	ENST00000451859	HPCAL1	P37235	193 aa		7.85	□□□□□ -1.15
RFX3-209	ENST00000451859	ASMT	P46597	345 aa		7.85	□□□□□ -1.15
RFX3-209	ENST00000451859	CLK3	P49761	638 aa	Known RBP	7.85	□□□□□ -1.15
RFX3-209	ENST00000451859	LHX2	P50458	406 aa		7.85	□□□□□ -1.15
RFX3-209	ENST00000451859	TPD52	P55327	224 aa	Predicted RBP	7.85	□□□□□ -1.15
RFX3-209	ENST00000451859	GFRA1	P56159	465 aa		7.85	□□□□□ -1.15
RFX3-209	ENST00000451859	DSCR4	P56555	118 aa	Predicted RBP	7.85	□□□□□ -1.15
RFX3-209	ENST00000451859	CLDN18	P56856	261 aa		7.85	□□□□□ -1.15
RFX3-209	ENST00000451859	PSPH	P78330	225 aa		7.85	□□□□□ -1.15
RFX3-209	ENST00000451859	PTGR1	Q14914	329 aa		7.85	□□□□□ -1.15
RFX3-209	ENST00000451859	CYP27C1	Q4G0S4	372 aa		7.85	□□□□□ -1.15
RFX3-209	ENST00000451859	EMB	Q6PCB8	327 aa		7.85	□□□□□ -1.15
RFX3-209	ENST00000451859	FIGNL1	Q6PIW4	674 aa		7.85	□□□□□ -1.15
RFX3-209	ENST00000451859	POMZP3	Q6PJE2	187 aa		7.85	□□□□□ -1.15
RFX3-209	ENST00000451859	CHMP1B	Q7LBR1	199 aa		7.85	□□□□□ -1.15
RFX3-209	ENST00000451859	FNDC5	Q8NAU1	212 aa		7.85	□□□□□ -1.15
RFX3-209	ENST00000451859	OR7A2P	Q8NGA2	310 aa		7.85	□□□□□ -1.15
RFX3-209	ENST00000451859	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	7.85	□□□□□ -1.15
RFX3-209	ENST00000451859	PPP1R14C	Q8TAE6	165 aa		7.85	□□□□□ -1.15
RFX3-209	ENST00000451859	LINC01560	Q8TB33	94 aa		7.85	□□□□□ -1.15
RFX3-209	ENST00000451859	ZPLD1	Q8TCW7	415 aa		7.85	□□□□□ -1.15
RFX3-209	ENST00000451859	DUSP19	Q8WTR2	217 aa		7.85	□□□□□ -1.15
RFX3-209	ENST00000451859	NUDT8	Q8WV74	236 aa		7.85	□□□□□ -1.15
RFX3-209	ENST00000451859	DTNBP1	Q96EV8	351 aa		7.85	□□□□□ -1.15
RFX3-209	ENST00000451859	ZBED6CL	Q96FA7	236 aa	Predicted RBP	7.85	□□□□□ -1.15
RFX3-209	ENST00000451859	C16orf58	Q96GQ5	468 aa		7.85	□□□□□ -1.15
RFX3-209	ENST00000451859	FCRL1	Q96LA6	429 aa		7.85	□□□□□ -1.15
RFX3-209	ENST00000451859	C3orf30	Q96M34	536 aa		7.85	□□□□□ -1.15
RFX3-209	ENST00000451859	MS4A4E	Q96PG1	132 aa		7.85	□□□□□ -1.15
RFX3-209	ENST00000451859	SH3GL2	Q99962	352 aa		7.85	□□□□□ -1.15
RFX3-209	ENST00000451859	LMF2	Q9BU23	707 aa	Known RBP	7.85	□□□□□ -1.15
RFX3-209	ENST00000451859	G6PC3	Q9BUM1	346 aa		7.85	□□□□□ -1.15
RFX3-209	ENST00000451859	POLDIP3	Q9BY77	421 aa	Known RBP	7.85	□□□□□ -1.15
RFX3-209	ENST00000451859	ROPN1B	Q9BZX4	212 aa	Predicted RBP	7.85	□□□□□ -1.15
RFX3-209	ENST00000451859	CALHM2	Q9HA72	323 aa		7.85	□□□□□ -1.15
RFX3-209	ENST00000451859	ROPN1	Q9HAT0	212 aa	Predicted RBP	7.85	□□□□□ -1.15
RFX3-209	ENST00000451859	C3orf14	Q9HBI5	128 aa		7.85	□□□□□ -1.15
RFX3-209	ENST00000451859	SDHAF3	Q9NRP4	125 aa		7.85	□□□□□ -1.15
RFX3-209	ENST00000451859	FAM120C	Q9NX05	1096 aa	Known RBP	7.85	□□□□□ -1.15
RFX3-209	ENST00000451859	ZNF629	Q9UEG4	869 aa	Predicted RBP	7.85	□□□□□ -1.15
RFX3-209	ENST00000451859	ZDHHC2	Q9UIJ5	367 aa		7.85	□□□□□ -1.15
RFX3-209	ENST00000451859	MRTO4	Q9UKD2	239 aa	Known RBP	7.85	□□□□□ -1.15
RFX3-209	ENST00000451859	SNX8	Q9Y5X2	465 aa		7.85	□□□□□ -1.15
RFX3-209	ENST00000451859	PRRC2A	P48634	2157 aa	Known RBP	7.85	□□□□□ -1.15
RFX3-209	ENST00000451859	PRR14L	Q5THK1	2151 aa		7.84	□□□□□ -1.15
RFX3-209	ENST00000451859	TMEM114	B3SHH9	223 aa		7.84	□□□□□ -1.15
RFX3-209	ENST00000451859	NPIPB8	E9PQR5	432 aa		7.84	□□□□□ -1.15
RFX3-209	ENST00000451859	SYT5	O00445	386 aa		7.84	□□□□□ -1.15
RFX3-209	ENST00000451859	SCAMP2	O15127	329 aa	Known RBP	7.84	□□□□□ -1.15
RFX3-209	ENST00000451859	RGS16	O15492	202 aa	Predicted RBP	7.84	□□□□□ -1.15
RFX3-209	ENST00000451859	EMC8	O43402	210 aa		7.84	□□□□□ -1.15
RFX3-209	ENST00000451859	ZIC3	O60481	467 aa		7.84	□□□□□ -1.15
RFX3-209	ENST00000451859	SMNDC1	O75940	238 aa	Known RBP eCLIP	7.84	□□□□□ -1.15
RFX3-209	ENST00000451859	ANGPTL1	O95841	491 aa		7.84	□□□□□ -1.15
RFX3-209	ENST00000451859	TGM6	O95932	706 aa		7.84	□□□□□ -1.15
RFX3-209	ENST00000451859	BPGM	P07738	259 aa		7.84	□□□□□ -1.15
RFX3-209	ENST00000451859	FGF4	P08620	206 aa		7.84	□□□□□ -1.15
RFX3-209	ENST00000451859	ZNF708	P17019	499 aa		7.84	□□□□□ -1.15
RFX3-209	ENST00000451859	CHM	P24386	653 aa		7.84	□□□□□ -1.15
RFX3-209	ENST00000451859	MAPK1	P28482	360 aa		7.84	□□□□□ -1.15
RFX3-209	ENST00000451859	OPRM1	P35372	400 aa		7.84	□□□□□ -1.15
RFX3-209	ENST00000451859	PSMD4	P55036	377 aa	Known RBP	7.84	□□□□□ -1.15
RFX3-209	ENST00000451859	B3GALT5-AS1	P59052	145 aa		7.84	□□□□□ -1.15
RFX3-209	ENST00000451859	SIRPA	P78324	504 aa		7.84	□□□□□ -1.15
RFX3-209	ENST00000451859	PDE7A	Q13946	482 aa		7.84	□□□□□ -1.15
RFX3-209	ENST00000451859	POU4F3	Q15319	338 aa		7.84	□□□□□ -1.15
RFX3-209	ENST00000451859	PDCD2	Q16342	344 aa	Predicted RBP	7.84	□□□□□ -1.15
RFX3-209	ENST00000451859	DUSP5	Q16690	384 aa		7.84	□□□□□ -1.15
RFX3-209	ENST00000451859	UGT3A2	Q3SY77	523 aa		7.84	□□□□□ -1.15
RFX3-209	ENST00000451859	SPDYE7P	Q495Y7	208 aa		7.84	□□□□□ -1.15
RFX3-209	ENST00000451859	FLYWCH1	Q4VC44	716 aa		7.84	□□□□□ -1.15
RFX3-209	ENST00000451859	ATP6AP1L	Q52LC2	224 aa		7.84	□□□□□ -1.15
RFX3-209	ENST00000451859	XKR7	Q5GH72	579 aa		7.84	□□□□□ -1.15
RFX3-209	ENST00000451859	CCNJ	Q5T5M9	372 aa		7.84	□□□□□ -1.15
RFX3-209	ENST00000451859	IL23R	Q5VWK5	629 aa		7.84	□□□□□ -1.15

Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms