RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 RHOJQ9H4E5 214 aa11.13□□□□□ -0.63
AC004540.1-204ENST00000449537 ROPN1Q9HAT0 212 aaPredicted RBP11.13□□□□□ -0.63
AC004540.1-204ENST00000449537 MED4Q9NPJ6 270 aa11.13□□□□□ -0.63
AC004540.1-204ENST00000449537 STOML1Q9UBI4 398 aa11.13□□□□□ -0.63
AC004540.1-204ENST00000449537 BCAP29Q9UHQ4 241 aa11.13□□□□□ -0.63
AC004540.1-204ENST00000449537 FKBP7Q9Y680 259 aa11.13□□□□□ -0.63
AC004540.1-204ENST00000449537 A0A1W2PR48 441 aa11.12□□□□□ -0.63
AC004540.1-204ENST00000449537 B4DXG7 233 aa11.12□□□□□ -0.63
AC004540.1-204ENST00000449537 EIF1AYO14602 144 aaKnown RBP11.12□□□□□ -0.63
AC004540.1-204ENST00000449537 SYNGR4O95473 234 aa11.12□□□□□ -0.63
AC004540.1-204ENST00000449537 NTN1O95631 604 aa11.12□□□□□ -0.63
AC004540.1-204ENST00000449537 NR2F6P10588 404 aa11.12□□□□□ -0.63
AC004540.1-204ENST00000449537 NT5EP21589 574 aa11.12□□□□□ -0.63
AC004540.1-204ENST00000449537 AGTR1P30556 359 aa11.12□□□□□ -0.63
AC004540.1-204ENST00000449537 SPRP35270 261 aaPredicted RBP11.12□□□□□ -0.63
AC004540.1-204ENST00000449537 CASP2P42575 452 aa11.12□□□□□ -0.63
AC004540.1-204ENST00000449537 RAP1GDS1P52306 607 aa11.12□□□□□ -0.63
AC004540.1-204ENST00000449537 ARFIP2P53365 341 aa11.12□□□□□ -0.63
AC004540.1-204ENST00000449537 PGGT1BP53609 377 aa11.12□□□□□ -0.63
AC004540.1-204ENST00000449537 STK11Q15831 433 aa11.12□□□□□ -0.63
AC004540.1-204ENST00000449537 FBLN7Q53RD9 439 aa11.12□□□□□ -0.63
AC004540.1-204ENST00000449537 GRTP1Q5TC63 336 aa11.12□□□□□ -0.63
AC004540.1-204ENST00000449537 KHDRBS2Q5VWX1 349 aaKnown RBP11.12□□□□□ -0.63
AC004540.1-204ENST00000449537 FAM45BPQ6NSW5 357 aa11.12□□□□□ -0.63
AC004540.1-204ENST00000449537 ZNF544Q6NX49 715 aa11.12□□□□□ -0.63
AC004540.1-204ENST00000449537 LRIG3Q6UXM1 1119 aa11.12□□□□□ -0.63
AC004540.1-204ENST00000449537 BHLHA15Q7RTS1 189 aaPredicted RBP11.12□□□□□ -0.63
AC004540.1-204ENST00000449537 SSX8Q7RTT4 187 aa11.12□□□□□ -0.63
AC004540.1-204ENST00000449537 CTAGE3PQ8IX95 158 aa11.12□□□□□ -0.63
AC004540.1-204ENST00000449537 NUP43Q8NFH3 380 aa11.12□□□□□ -0.63
AC004540.1-204ENST00000449537 OR2W6PQ8NHA6 318 aa11.12□□□□□ -0.63
AC004540.1-204ENST00000449537 FAM45AQ8TCE6 357 aa11.12□□□□□ -0.63
AC004540.1-204ENST00000449537 HPS1Q92902 700 aa11.12□□□□□ -0.63
AC004540.1-204ENST00000449537 TMBIM1Q969X1 311 aa11.12□□□□□ -0.63
AC004540.1-204ENST00000449537 WDR34Q96EX3 536 aa11.12□□□□□ -0.63
AC004540.1-204ENST00000449537 TSPAN17Q96FV3 270 aa11.12□□□□□ -0.63
AC004540.1-204ENST00000449537 CMTM7Q96FZ5 175 aa11.12□□□□□ -0.63
AC004540.1-204ENST00000449537 ADOQ96SZ5 270 aa11.12□□□□□ -0.63
AC004540.1-204ENST00000449537 RBBP8Q99708 897 aa11.12□□□□□ -0.63
AC004540.1-204ENST00000449537 TMEM109Q9BVC6 243 aa11.12□□□□□ -0.63
AC004540.1-204ENST00000449537 ITPAQ9BY32 194 aa11.12□□□□□ -0.63
AC004540.1-204ENST00000449537 BPESC1Q9GZL8 116 aa11.12□□□□□ -0.63
AC004540.1-204ENST00000449537 OR51B5Q9H339 312 aa11.12□□□□□ -0.63
AC004540.1-204ENST00000449537 MYOZ1Q9NP98 299 aaPredicted RBP11.12□□□□□ -0.63
AC004540.1-204ENST00000449537 PAQR5Q9NXK6 330 aaPredicted RBP11.12□□□□□ -0.63
AC004540.1-204ENST00000449537 PPP4R1LQ9P1A2 415 aa11.12□□□□□ -0.63
AC004540.1-204ENST00000449537 PSMC3IPQ9P2W1 217 aaPredicted RBP11.12□□□□□ -0.63
AC004540.1-204ENST00000449537 GOLGA8QA0A0J9YX86 632 aa11.11□□□□□ -0.63
AC004540.1-204ENST00000449537 A0A1W2PS29 197 aa11.11□□□□□ -0.63
AC004540.1-204ENST00000449537 GOLGA8OA6NCC3 632 aa11.11□□□□□ -0.63
AC004540.1-204ENST00000449537 GOLGA8NF8WBI6 632 aa11.11□□□□□ -0.63
AC004540.1-204ENST00000449537 GOLGA8RI6L899 631 aa11.11□□□□□ -0.63
AC004540.1-204ENST00000449537 PCNAP12004 261 aa11.11□□□□□ -0.63
AC004540.1-204ENST00000449537 COL6A2P12110 1019 aa11.11□□□□□ -0.63
AC004540.1-204ENST00000449537 CD22P20273 847 aa11.11□□□□□ -0.63
AC004540.1-204ENST00000449537 GABRB3P28472 473 aa11.11□□□□□ -0.63
AC004540.1-204ENST00000449537 PPICP45877 212 aa11.11□□□□□ -0.63
AC004540.1-204ENST00000449537 CHN2P52757 468 aa11.11□□□□□ -0.63
AC004540.1-204ENST00000449537 DVL1P1P54792 670 aaPredicted RBP11.11□□□□□ -0.63
AC004540.1-204ENST00000449537 GAS1P54826 345 aa11.11□□□□□ -0.63
AC004540.1-204ENST00000449537 IFFO1Q0D2I5 559 aa11.11□□□□□ -0.63
AC004540.1-204ENST00000449537 EFR3AQ14156 821 aa11.11□□□□□ -0.63
AC004540.1-204ENST00000449537 SLC29A2Q14542 456 aa11.11□□□□□ -0.63
AC004540.1-204ENST00000449537 GANABQ14697 944 aaKnown RBP11.11□□□□□ -0.63
AC004540.1-204ENST00000449537 GLYR1Q49A26 553 aaPredicted RBP11.11□□□□□ -0.63
AC004540.1-204ENST00000449537 TMEM201Q5SNT2 666 aa11.11□□□□□ -0.63
AC004540.1-204ENST00000449537 UGT2A3Q6UWM9 527 aa11.11□□□□□ -0.63
AC004540.1-204ENST00000449537 TMEM108Q6UXF1 575 aa11.11□□□□□ -0.63
AC004540.1-204ENST00000449537 TBC1D1Q86TI0 1168 aaPredicted RBP11.11□□□□□ -0.63
AC004540.1-204ENST00000449537 FADS6Q8N9I5 356 aa11.11□□□□□ -0.63
AC004540.1-204ENST00000449537 OR2M3Q8NG83 312 aa11.11□□□□□ -0.63
AC004540.1-204ENST00000449537 OR10D3Q8NH80 312 aa11.11□□□□□ -0.63
AC004540.1-204ENST00000449537 PAFAH2Q99487 392 aa11.11□□□□□ -0.63
AC004540.1-204ENST00000449537 CENPKQ9BS16 269 aa11.11□□□□□ -0.63
AC004540.1-204ENST00000449537 TRMOQ9BU70 441 aa11.11□□□□□ -0.63
AC004540.1-204ENST00000449537 PTGES2Q9H7Z7 377 aa11.11□□□□□ -0.63
AC004540.1-204ENST00000449537 POPDC3Q9HBV1 291 aa11.11□□□□□ -0.63
AC004540.1-204ENST00000449537 ZNF446Q9NWS9 450 aa11.11□□□□□ -0.63
AC004540.1-204ENST00000449537 LYARQ9NX58 379 aaKnown RBP11.11□□□□□ -0.63
AC004540.1-204ENST00000449537 MED11Q9P086 117 aa11.11□□□□□ -0.63
AC004540.1-204ENST00000449537 VWA7Q9Y334 891 aa11.11□□□□□ -0.63
AC004540.1-204ENST00000449537 OARD1Q9Y530 152 aa11.11□□□□□ -0.63
AC004540.1-204ENST00000449537 ASB4Q9Y574 426 aa11.11□□□□□ -0.63
AC004540.1-204ENST00000449537 PCNX3Q9H6A9 2034 aa11.11□□□□□ -0.63
AC004540.1-204ENST00000449537 C17orf51A8MQB3 221 aa11.1□□□□□ -0.63
AC004540.1-204ENST00000449537 PGRMC2O15173 223 aa11.1□□□□□ -0.63
AC004540.1-204ENST00000449537 TO15178 435 aa11.1□□□□□ -0.63
AC004540.1-204ENST00000449537 AHSGP02765 367 aa11.1□□□□□ -0.63
AC004540.1-204ENST00000449537 DHRS4L1P0CG22 281 aa11.1□□□□□ -0.63
AC004540.1-204ENST00000449537 APEX1P27695 318 aaKnown RBP11.1□□□□□ -0.63
AC004540.1-204ENST00000449537 XKP51811 444 aa11.1□□□□□ -0.63
AC004540.1-204ENST00000449537 CDH15P55291 814 aa11.1□□□□□ -0.63
AC004540.1-204ENST00000449537 POU4F1Q01851 419 aa11.1□□□□□ -0.63
AC004540.1-204ENST00000449537 IRF8Q02556 426 aa11.1□□□□□ -0.63
AC004540.1-204ENST00000449537 UAP1Q16222 522 aaPredicted RBP11.1□□□□□ -0.63
AC004540.1-204ENST00000449537 OCLNQ16625 522 aa11.1□□□□□ -0.63
AC004540.1-204ENST00000449537 TFAP2EQ6VUC0 442 aa11.1□□□□□ -0.63
AC004540.1-204ENST00000449537 FRA10AC1Q70Z53 315 aa11.1□□□□□ -0.63
AC004540.1-204ENST00000449537 GGNQ86UU5 652 aa11.1□□□□□ -0.63
AC004540.1-204ENST00000449537 ZC3HC1Q86WB0 502 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms