RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 ING2Q9H160 280 aa13.47□□□□□ -0.25
TNF-208ENST00000449264 OLAHQ9NV23 265 aa13.47□□□□□ -0.25
TNF-208ENST00000449264 KCNE5Q9UJ90 142 aa13.47□□□□□ -0.25
TNF-208ENST00000449264 ANAPC2Q9UJX6 822 aa13.47□□□□□ -0.25
TNF-208ENST00000449264 ZNF443Q9Y2A4 671 aaPredicted RBP13.47□□□□□ -0.25
TNF-208ENST00000449264 YARS2Q9Y2Z4 477 aaKnown RBP13.47□□□□□ -0.25
TNF-208ENST00000449264 PCDHGA10Q9Y5H3 936 aa13.47□□□□□ -0.25
TNF-208ENST00000449264 MED19A0JLT2 244 aaPredicted RBP13.46□□□□□ -0.26
TNF-208ENST00000449264 OR6C70A6NIJ9 312 aa13.46□□□□□ -0.26
TNF-208ENST00000449264 AGAP5A6NIR3 686 aa13.46□□□□□ -0.26
TNF-208ENST00000449264 CLDN24A6NM45 220 aa13.46□□□□□ -0.26
TNF-208ENST00000449264 RRP8O43159 456 aaKnown RBP13.46□□□□□ -0.26
TNF-208ENST00000449264 ABCB7O75027 752 aa13.46□□□□□ -0.26
TNF-208ENST00000449264 KRT36O76013 467 aa13.46□□□□□ -0.26
TNF-208ENST00000449264 DBIP07108 87 aaKnown RBP13.46□□□□□ -0.26
TNF-208ENST00000449264 HPGDP15428 266 aa13.46□□□□□ -0.26
TNF-208ENST00000449264 TNFRSF1BP20333 461 aa13.46□□□□□ -0.26
TNF-208ENST00000449264 CD247P20963 164 aa13.46□□□□□ -0.26
TNF-208ENST00000449264 EIF2S3P41091 472 aaKnown RBP13.46□□□□□ -0.26
TNF-208ENST00000449264 PNLIPRP2P54317 469 aa13.46□□□□□ -0.26
TNF-208ENST00000449264 ATP12AP54707 1039 aa13.46□□□□□ -0.26
TNF-208ENST00000449264 SELENOWP63302 87 aa13.46□□□□□ -0.26
TNF-208ENST00000449264 LARS2Q15031 903 aaKnown RBP13.46□□□□□ -0.26
TNF-208ENST00000449264 DUSP7Q16829 419 aa13.46□□□□□ -0.26
TNF-208ENST00000449264 GLIPR1L2Q4G1C9 344 aa13.46□□□□□ -0.26
TNF-208ENST00000449264 LIN52Q52LA3 116 aa13.46□□□□□ -0.26
TNF-208ENST00000449264 CRTC2Q53ET0 693 aaPredicted RBP13.46□□□□□ -0.26
TNF-208ENST00000449264 CCDC81Q6ZN84 652 aa13.46□□□□□ -0.26
TNF-208ENST00000449264 ZNF836Q6ZNA1 936 aa13.46□□□□□ -0.26
TNF-208ENST00000449264 ADGRG5Q8IZF4 528 aa13.46□□□□□ -0.26
TNF-208ENST00000449264 TMEM156Q8N614 296 aa13.46□□□□□ -0.26
TNF-208ENST00000449264 OR4C3Q8NH37 302 aa13.46□□□□□ -0.26
TNF-208ENST00000449264 RASSF5Q8WWW0 418 aa13.46□□□□□ -0.26
TNF-208ENST00000449264 PSMF1Q92530 271 aa13.46□□□□□ -0.26
TNF-208ENST00000449264 SPACA9Q96E40 222 aaPredicted RBP13.46□□□□□ -0.26
TNF-208ENST00000449264 C1QTNF9BB2RNN3 333 aa13.45□□□□□ -0.26
TNF-208ENST00000449264 TMEM229AB2RXF0 380 aa13.45□□□□□ -0.26
TNF-208ENST00000449264 H0Y3Z8 333 aa13.45□□□□□ -0.26
TNF-208ENST00000449264 TPST1O60507 370 aa13.45□□□□□ -0.26
TNF-208ENST00000449264 DNAJB5O75953 348 aa13.45□□□□□ -0.26
TNF-208ENST00000449264 OR6B1O95007 311 aa13.45□□□□□ -0.26
TNF-208ENST00000449264 OXSR1O95747 527 aaPredicted RBP13.45□□□□□ -0.26
TNF-208ENST00000449264 MT-ND1P03886 318 aa13.45□□□□□ -0.26
TNF-208ENST00000449264 GPIP06744 558 aa13.45□□□□□ -0.26
TNF-208ENST00000449264 FBXO45P0C2W1 286 aa13.45□□□□□ -0.26
TNF-208ENST00000449264 C1QTNF9P0C862 333 aa13.45□□□□□ -0.26
TNF-208ENST00000449264 RPS4Y1P22090 263 aaKnown RBP13.45□□□□□ -0.26
TNF-208ENST00000449264 ELOAQ14241 798 aaKnown RBP13.45□□□□□ -0.26
TNF-208ENST00000449264 MEP1AQ16819 746 aa13.45□□□□□ -0.26
TNF-208ENST00000449264 ACER2Q5QJU3 275 aa13.45□□□□□ -0.26
TNF-208ENST00000449264 H3F3CQ6NXT2 135 aa13.45□□□□□ -0.26
TNF-208ENST00000449264 IL20RBQ6UXL0 311 aa13.45□□□□□ -0.26
TNF-208ENST00000449264 GATSQ8NAP1 163 aa13.45□□□□□ -0.26
TNF-208ENST00000449264 ZNF527Q8NB42 609 aa13.45□□□□□ -0.26
TNF-208ENST00000449264 GPR32P1Q8NGA4 272 aa13.45□□□□□ -0.26
TNF-208ENST00000449264 PROX1Q92786 737 aa13.45□□□□□ -0.26
TNF-208ENST00000449264 PYURFQ96I23 114 aa13.45□□□□□ -0.26
TNF-208ENST00000449264 DOHHQ9BU89 302 aa13.45□□□□□ -0.26
TNF-208ENST00000449264 RSPO3Q9BXY4 272 aaPredicted RBP13.45□□□□□ -0.26
TNF-208ENST00000449264 UGT2B28Q9BY64 529 aa13.45□□□□□ -0.26
TNF-208ENST00000449264 UBQLN4Q9NRR5 601 aa13.45□□□□□ -0.26
TNF-208ENST00000449264 ANKRD10Q9NXR5 420 aa13.45□□□□□ -0.26
TNF-208ENST00000449264 TEKT2Q9UIF3 430 aa13.45□□□□□ -0.26
TNF-208ENST00000449264 SLC13A4Q9UKG4 626 aa13.45□□□□□ -0.26
TNF-208ENST00000449264 BAG5Q9UL15 447 aa13.45□□□□□ -0.26
TNF-208ENST00000449264 ZNF232Q9UNY5 417 aa13.45□□□□□ -0.26
TNF-208ENST00000449264 RAXQ9Y2V3 346 aa13.45□□□□□ -0.26
TNF-208ENST00000449264 IFT52Q9Y366 437 aa13.45□□□□□ -0.26
TNF-208ENST00000449264 SH3GLB1Q9Y371 365 aa13.45□□□□□ -0.26
TNF-208ENST00000449264 EML6Q6ZMW3 1958 aa13.44□□□□□ -0.26
TNF-208ENST00000449264 NPIPB9F8W1W9 429 aa13.44□□□□□ -0.26
TNF-208ENST00000449264 SCDO00767 359 aa13.44□□□□□ -0.26
TNF-208ENST00000449264 FESP07332 822 aa13.44□□□□□ -0.26
TNF-208ENST00000449264 GUSBP08236 651 aa13.44□□□□□ -0.26
TNF-208ENST00000449264 NID1P14543 1247 aa13.44□□□□□ -0.26
TNF-208ENST00000449264 PRKAR1BP31321 381 aa13.44□□□□□ -0.26
TNF-208ENST00000449264 EVI2BP34910 448 aa13.44□□□□□ -0.26
TNF-208ENST00000449264 OR1E2P47887 323 aa13.44□□□□□ -0.26
TNF-208ENST00000449264 KCNJ5P48544 419 aa13.44□□□□□ -0.26
TNF-208ENST00000449264 CHRNB3Q05901 458 aa13.44□□□□□ -0.26
TNF-208ENST00000449264 EFR3AQ14156 821 aa13.44□□□□□ -0.26
TNF-208ENST00000449264 FAM98BQ52LJ0 330 aaKnown RBP13.44□□□□□ -0.26
TNF-208ENST00000449264 IFI44LQ53G44 452 aa13.44□□□□□ -0.26
TNF-208ENST00000449264 TBCELQ5QJ74 424 aa13.44□□□□□ -0.26
TNF-208ENST00000449264 MRPL2Q5T653 305 aaKnown RBP13.44□□□□□ -0.26
TNF-208ENST00000449264 OPN5Q6U736 354 aa13.44□□□□□ -0.26
TNF-208ENST00000449264 LYPD8Q6UX82 237 aa13.44□□□□□ -0.26
TNF-208ENST00000449264 COMTD1Q86VU5 262 aa13.44□□□□□ -0.26
TNF-208ENST00000449264 BEST3Q8N1M1 668 aa13.44□□□□□ -0.26
TNF-208ENST00000449264 SLC15A4Q8N697 577 aa13.44□□□□□ -0.26
TNF-208ENST00000449264 OR10G3Q8NGC4 313 aa13.44□□□□□ -0.26
TNF-208ENST00000449264 VANGL1Q8TAA9 524 aaPredicted RBP13.44□□□□□ -0.26
TNF-208ENST00000449264 PMM1Q92871 262 aa13.44□□□□□ -0.26
TNF-208ENST00000449264 ZNF354BQ96LW1 612 aa13.44□□□□□ -0.26
TNF-208ENST00000449264 PINK1Q9BXM7 581 aa13.44□□□□□ -0.26
TNF-208ENST00000449264 RLIMQ9NVW2 624 aa13.44□□□□□ -0.26
TNF-208ENST00000449264 GPR83Q9NYM4 423 aa13.44□□□□□ -0.26
TNF-208ENST00000449264 M0R3H8 397 aa13.44□□□□□ -0.26
TNF-208ENST00000449264 FRS3O43559 492 aa13.44□□□□□ -0.26
TNF-208ENST00000449264 SCO2O43819 266 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms