RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 EEF1A1P68104 462 aaKnown RBP17.74■□□□□ 0.43
RPS28-202ENST00000449223 KCNC4Q03721 635 aa17.74■□□□□ 0.43
RPS28-202ENST00000449223 AIMP2Q13155 320 aaKnown RBP17.74■□□□□ 0.43
RPS28-202ENST00000449223 LYPD8Q6UX82 237 aa17.74■□□□□ 0.43
RPS28-202ENST00000449223 FKBP9P1Q75LS8 142 aa17.74■□□□□ 0.43
RPS28-202ENST00000449223 VRK2Q86Y07 508 aa17.74■□□□□ 0.43
RPS28-202ENST00000449223 CMIPQ8IY22 773 aa17.74■□□□□ 0.43
RPS28-202ENST00000449223 ZNF248Q8NDW4 579 aa17.74■□□□□ 0.43
RPS28-202ENST00000449223 RNF138Q8WVD3 245 aa17.74■□□□□ 0.43
RPS28-202ENST00000449223 SLC35B4Q969S0 331 aa17.74■□□□□ 0.43
RPS28-202ENST00000449223 EFHD2Q96C19 240 aaPredicted RBP17.74■□□□□ 0.43
RPS28-202ENST00000449223 TPD52L3Q96J77 140 aa17.74■□□□□ 0.43
RPS28-202ENST00000449223 FER1L6-AS2Q96M78 137 aa17.74■□□□□ 0.43
RPS28-202ENST00000449223 DPH1Q9BZG8 443 aa17.74■□□□□ 0.43
RPS28-202ENST00000449223 EVA1AQ9H8M9 152 aa17.74■□□□□ 0.43
RPS28-202ENST00000449223 CACYBPQ9HB71 228 aaKnown RBP17.74■□□□□ 0.43
RPS28-202ENST00000449223 ZNF232Q9UNY5 417 aa17.74■□□□□ 0.43
RPS28-202ENST00000449223 V9GYQ6 96 aa17.74■□□□□ 0.43
RPS28-202ENST00000449223 NINQ8N4C6 2090 aa17.74■□□□□ 0.43
RPS28-202ENST00000449223 CACNA1AO00555 2505 aa17.74■□□□□ 0.43
RPS28-202ENST00000449223 WWP2O00308 870 aa17.73■□□□□ 0.43
RPS28-202ENST00000449223 FBXO45P0C2W1 286 aa17.73■□□□□ 0.43
RPS28-202ENST00000449223 TBXA2RP21731 343 aa17.73■□□□□ 0.43
RPS28-202ENST00000449223 ADH7P40394 386 aa17.73■□□□□ 0.43
RPS28-202ENST00000449223 SOX8P57073 446 aa17.73■□□□□ 0.43
RPS28-202ENST00000449223 EFR3AQ14156 821 aa17.73■□□□□ 0.43
RPS28-202ENST00000449223 NRF1Q16656 503 aa17.73■□□□□ 0.43
RPS28-202ENST00000449223 GLIPR1L2Q4G1C9 344 aa17.73■□□□□ 0.43
RPS28-202ENST00000449223 KLHL26Q53HC5 615 aa17.73■□□□□ 0.43
RPS28-202ENST00000449223 EIPR1Q53HC9 387 aa17.73■□□□□ 0.43
RPS28-202ENST00000449223 GRAMD2AQ8IUY3 354 aa17.73■□□□□ 0.43
RPS28-202ENST00000449223 DND1Q8IYX4 353 aaKnown RBP17.73■□□□□ 0.43
RPS28-202ENST00000449223 SLC5A8Q8N695 610 aa17.73■□□□□ 0.43
RPS28-202ENST00000449223 TMEM102Q8N9M5 508 aaPredicted RBP17.73■□□□□ 0.43
RPS28-202ENST00000449223 OR10Q1Q8NGQ4 319 aa17.73■□□□□ 0.43
RPS28-202ENST00000449223 OR4C3Q8NH37 302 aa17.73■□□□□ 0.43
RPS28-202ENST00000449223 THAP3Q8WTV1 239 aaPredicted RBP17.73■□□□□ 0.43
RPS28-202ENST00000449223 PROX1Q92786 737 aa17.73■□□□□ 0.43
RPS28-202ENST00000449223 RASL10BQ96S79 203 aa17.73■□□□□ 0.43
RPS28-202ENST00000449223 ADOQ96SZ5 270 aa17.73■□□□□ 0.43
RPS28-202ENST00000449223 LIN28AQ9H9Z2 209 aaKnown RBP17.73■□□□□ 0.43
RPS28-202ENST00000449223 AGPAT4Q9NRZ5 378 aa17.73■□□□□ 0.43
RPS28-202ENST00000449223 C6orf203Q9P0P8 240 aaPredicted RBP17.73■□□□□ 0.43
RPS28-202ENST00000449223 YARS2Q9Y2Z4 477 aaKnown RBP17.73■□□□□ 0.43
RPS28-202ENST00000449223 PRAMEF25A6NGN4 478 aa17.72■□□□□ 0.43
RPS28-202ENST00000449223 H0Y3Z8 333 aa17.72■□□□□ 0.43
RPS28-202ENST00000449223 DPM1O60762 260 aa17.72■□□□□ 0.43
RPS28-202ENST00000449223 ITGA10O75578 1167 aa17.72■□□□□ 0.43
RPS28-202ENST00000449223 REM1O75628 298 aa17.72■□□□□ 0.43
RPS28-202ENST00000449223 OR2J2O76002 312 aa17.72■□□□□ 0.43
RPS28-202ENST00000449223 ADRB1P08588 477 aa17.72■□□□□ 0.43
RPS28-202ENST00000449223 ANPEPP15144 967 aa17.72■□□□□ 0.43
RPS28-202ENST00000449223 RFX3P48380 749 aa17.72■□□□□ 0.43
RPS28-202ENST00000449223 MLF1P58340 268 aa17.72■□□□□ 0.43
RPS28-202ENST00000449223 VLDLRP98155 873 aa17.72■□□□□ 0.43
RPS28-202ENST00000449223 FGFBP1Q14512 234 aa17.72■□□□□ 0.43
RPS28-202ENST00000449223 ZNF836Q6ZNA1 936 aa17.72■□□□□ 0.43
RPS28-202ENST00000449223 C16orf47Q6ZP98 133 aaPredicted RBP17.72■□□□□ 0.43
RPS28-202ENST00000449223 ERMP1Q7Z2K6 904 aa17.72■□□□□ 0.43
RPS28-202ENST00000449223 COMTD1Q86VU5 262 aa17.72■□□□□ 0.43
RPS28-202ENST00000449223 LILRA2Q8N149 483 aa17.72■□□□□ 0.43
RPS28-202ENST00000449223 PQLC1Q8N2U9 271 aa17.72■□□□□ 0.43
RPS28-202ENST00000449223 ZNF527Q8NB42 609 aa17.72■□□□□ 0.43
RPS28-202ENST00000449223 KCNE4Q8WWG9 221 aa17.72■□□□□ 0.43
RPS28-202ENST00000449223 PSMF1Q92530 271 aa17.72■□□□□ 0.43
RPS28-202ENST00000449223 ARHGDIGQ99819 225 aa17.72■□□□□ 0.43
RPS28-202ENST00000449223 ZFHX4Q86UP3 3567 aa17.72■□□□□ 0.43
RPS28-202ENST00000449223 CELSR3Q9NYQ7 3312 aa17.72■□□□□ 0.43
RPS28-202ENST00000449223 NPIPA5A0A0B4J1W7 369 aa17.72■□□□□ 0.43
RPS28-202ENST00000449223 A0A1W2PQD3 144 aa17.72■□□□□ 0.43
RPS28-202ENST00000449223 CDHR4A6H8M9 788 aa17.72■□□□□ 0.43
RPS28-202ENST00000449223 NPIPA7E9PJI5 369 aa17.72■□□□□ 0.43
RPS28-202ENST00000449223 TLX3O43711 291 aaPredicted RBP17.72■□□□□ 0.43
RPS28-202ENST00000449223 HS6ST1O60243 411 aa17.72■□□□□ 0.43
RPS28-202ENST00000449223 UGT2B11O75310 529 aa17.72■□□□□ 0.43
RPS28-202ENST00000449223 UTS2O95399 124 aa17.72■□□□□ 0.43
RPS28-202ENST00000449223 OXSR1O95747 527 aaPredicted RBP17.72■□□□□ 0.43
RPS28-202ENST00000449223 FABP3P05413 133 aa17.72■□□□□ 0.43
RPS28-202ENST00000449223 NPIPA8P0DM63 369 aa17.72■□□□□ 0.43
RPS28-202ENST00000449223 CYP4B1P13584 511 aa17.72■□□□□ 0.43
RPS28-202ENST00000449223 WT1P19544 449 aaPredicted RBP17.72■□□□□ 0.43
RPS28-202ENST00000449223 RRADP55042 308 aa17.72■□□□□ 0.43
RPS28-202ENST00000449223 NTRK2Q16620 822 aa17.72■□□□□ 0.43
RPS28-202ENST00000449223 PDZK1Q5T2W1 519 aa17.72■□□□□ 0.43
RPS28-202ENST00000449223 FNDC7Q5VTL7 733 aa17.72■□□□□ 0.43
RPS28-202ENST00000449223 FBXW10Q5XX13 1052 aa17.72■□□□□ 0.43
RPS28-202ENST00000449223 TSEN54Q7Z6J9 526 aaKnown RBP17.72■□□□□ 0.43
RPS28-202ENST00000449223 RPS19BP1Q86WX3 136 aaKnown RBP17.72■□□□□ 0.43
RPS28-202ENST00000449223 ZDHHC21Q8IVQ6 265 aa17.72■□□□□ 0.43
RPS28-202ENST00000449223 PRR22Q8IZ63 422 aa17.72■□□□□ 0.43
RPS28-202ENST00000449223 TTC9Q92623 222 aa17.72■□□□□ 0.43
RPS28-202ENST00000449223 ARMC7Q9H6L4 198 aa17.72■□□□□ 0.43
RPS28-202ENST00000449223 ATP13A2Q9NQ11 1180 aa17.72■□□□□ 0.43
RPS28-202ENST00000449223 NKX1-2Q9UD57 310 aaPredicted RBP17.72■□□□□ 0.43
RPS28-202ENST00000449223 RIMS3Q9UJD0 308 aa17.72■□□□□ 0.43
RPS28-202ENST00000449223 ABCG2Q9UNQ0 655 aa17.72■□□□□ 0.43
RPS28-202ENST00000449223 SLC9A8Q9Y2E8 581 aa17.72■□□□□ 0.43
RPS28-202ENST00000449223 DTNAQ9Y4J8 743 aa17.72■□□□□ 0.43
RPS28-202ENST00000449223 CPAMD8Q8IZJ3 1885 aa17.72■□□□□ 0.43
RPS28-202ENST00000449223 ZNF891A8MT65 544 aaPredicted RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms