RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 BDKRB2P30411 391 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 NR0B1P51843 470 aaKnown RBP7.35□□□□□ -1.23
NEDD9-204ENST00000448183 PER3P56645 1201 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 POU4F3Q15319 338 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 RSU1Q15404 277 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 KCNJ8Q15842 424 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 TATDN3Q17R31 274 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 PGM2L1Q6PCE3 622 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 DLK2Q6UY11 383 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 TMPPEQ6ZT21 453 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 CBLL1Q75N03 491 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 APCDD1Q8J025 514 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 CDRT4Q8N9R6 151 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 OR56B2PQ8NGI1 322 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 LILRB4Q8NHJ6 448 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 POC1BQ8TC44 478 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 SFXN5Q8TD22 340 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 NAA11Q9BSU3 229 aaPredicted RBP7.35□□□□□ -1.23
NEDD9-204ENST00000448183 NTMT1Q9BV86 223 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 HAPLN2Q9GZV7 340 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 PTTG3PQ9NZH4 202 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 ATXN7L1Q9ULK2 861 aaPredicted RBP7.35□□□□□ -1.23
NEDD9-204ENST00000448183 DNMT3AQ9Y6K1 912 aaPredicted RBP7.35□□□□□ -1.23
NEDD9-204ENST00000448183 NUMA1Q14980 2115 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 LOC102723532A0A0G2JNH3 316 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 POLR1CO15160 346 aaPredicted RBP7.35□□□□□ -1.23
NEDD9-204ENST00000448183 SYT7O43581 403 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 IL1RNP18510 177 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 CAV2P51636 162 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 SHC2P98077 582 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 MLLT11Q13015 90 aaPredicted RBP7.35□□□□□ -1.23
NEDD9-204ENST00000448183 ZNF704Q6ZNC4 412 aaPredicted RBP7.35□□□□□ -1.23
NEDD9-204ENST00000448183 B3GNT8Q7Z7M8 397 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 LRRC28Q86X40 367 aaPredicted RBP7.35□□□□□ -1.23
NEDD9-204ENST00000448183 PNPLA1Q8N8W4 532 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 BRIX1Q8TDN6 353 aaKnown RBP7.35□□□□□ -1.23
NEDD9-204ENST00000448183 PRRC1Q96M27 445 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 C3orf30Q96M34 536 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 SAMD11Q96NU1 681 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 IL37Q9NZH6 218 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 TMPRSS11EQ9UL52 423 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 SLC7A7Q9UM01 511 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 SLC6A5Q9Y345 797 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 IGLON5A6NGN9 336 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 CTDSP2O14595 271 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 KNG1P01042 644 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 EGFP01133 1207 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 TPT1P13693 172 aaKnown RBP7.35□□□□□ -1.23
NEDD9-204ENST00000448183 DDCP20711 480 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 CERS1P27544 350 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 GRM2Q14416 872 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 TMEM239Q8WW34 195 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 OR2M2Q96R28 347 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 PAAF1Q9BRP4 392 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 SAP130Q9H0E3 1048 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 REV1Q9UBZ9 1251 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 LSM5Q9Y4Y9 91 aaKnown RBP7.35□□□□□ -1.23
NEDD9-204ENST00000448183 BACE2Q9Y5Z0 518 aa7.35□□□□□ -1.23
NEDD9-204ENST00000448183 IGKV6D-21A0A0A0MT36 114 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 DCDC2BA2VCK2 349 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 RNGTTO60942 597 aaKnown RBP7.34□□□□□ -1.23
NEDD9-204ENST00000448183 GPR32O75388 356 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 SYN1P17600 705 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 FBLP22087 321 aaKnown RBP7.34□□□□□ -1.23
NEDD9-204ENST00000448183 GIFP27352 417 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 HOXA11P31270 313 aaPredicted RBP7.34□□□□□ -1.23
NEDD9-204ENST00000448183 RPS5P46782 204 aaKnown RBP7.34□□□□□ -1.23
NEDD9-204ENST00000448183 MALLQ13021 153 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 GBX1Q14549 363 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 BCL2A1Q16548 175 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 FAM180BQ6P0A1 224 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 FIGLAQ6QHK4 219 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 SGPP2Q8IWX5 399 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 OR5L2Q8NGL0 311 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 FIBINQ8TAL6 211 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 CIDECQ96AQ7 238 aaPredicted RBP7.34□□□□□ -1.23
NEDD9-204ENST00000448183 ACPTQ9BZG2 426 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 RASD1Q9Y272 281 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 SETD1AO15047 1707 aaKnown RBP7.34□□□□□ -1.23
NEDD9-204ENST00000448183 A6NLC8 198 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 PTGESO14684 152 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 NUPL2O15504 423 aaKnown RBP7.34□□□□□ -1.23
NEDD9-204ENST00000448183 HPGDSO60760 199 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 ZNF254O75437 659 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 MPIG6BO95866 241 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 GAAP10253 952 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 GCAP28676 217 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 SGSHP51688 502 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 NKX6-1P78426 367 aaPredicted RBP7.34□□□□□ -1.23
NEDD9-204ENST00000448183 PTPRRQ15256 657 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 PIANPQ8IYJ0 282 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 METTL4Q8N3J2 472 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 FAM109AQ8N4B1 249 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 C3orf58Q8NDZ4 430 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 OR1J4Q8NGS1 313 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 THAP3Q8WTV1 239 aaPredicted RBP7.34□□□□□ -1.23
NEDD9-204ENST00000448183 ACOT11Q8WXI4 607 aaPredicted RBP7.34□□□□□ -1.23
NEDD9-204ENST00000448183 TOMM40LQ969M1 308 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 NAA50Q9GZZ1 169 aaKnown RBP7.34□□□□□ -1.23
NEDD9-204ENST00000448183 DDX31Q9H8H2 851 aaKnown RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms