RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 OR2M3Q8NG83 312 aa13.49□□□□□ -0.25
HDAC4-204ENST00000446876 OR4K17Q8NGC6 315 aa13.49□□□□□ -0.25
HDAC4-204ENST00000446876 OR4C3Q8NH37 302 aa13.49□□□□□ -0.25
HDAC4-204ENST00000446876 OR14L1PQ8NHC6 308 aa13.49□□□□□ -0.25
HDAC4-204ENST00000446876 ADAMTS15Q8TE58 950 aa13.49□□□□□ -0.25
HDAC4-204ENST00000446876 PHF10Q8WUB8 498 aaKnown RBP13.49□□□□□ -0.25
HDAC4-204ENST00000446876 MOAP1Q96BY2 351 aa13.49□□□□□ -0.25
HDAC4-204ENST00000446876 SLC35G5Q96KT7 338 aa13.49□□□□□ -0.25
HDAC4-204ENST00000446876 MAGEB18Q96M61 343 aa13.49□□□□□ -0.25
HDAC4-204ENST00000446876 OR7D2Q96RA2 312 aa13.49□□□□□ -0.25
HDAC4-204ENST00000446876 ZBTB18Q99592 522 aa13.49□□□□□ -0.25
HDAC4-204ENST00000446876 UGT2B28Q9BY64 529 aa13.49□□□□□ -0.25
HDAC4-204ENST00000446876 TBL1XR1Q9BZK7 514 aa13.49□□□□□ -0.25
HDAC4-204ENST00000446876 OR2B2Q9GZK3 357 aa13.49□□□□□ -0.25
HDAC4-204ENST00000446876 ACBD3Q9H3P7 528 aa13.49□□□□□ -0.25
HDAC4-204ENST00000446876 DUSP22Q9NRW4 184 aa13.49□□□□□ -0.25
HDAC4-204ENST00000446876 DKKL1Q9UK85 242 aa13.49□□□□□ -0.25
HDAC4-204ENST00000446876 PCDHGB4Q9UN71 923 aa13.49□□□□□ -0.25
HDAC4-204ENST00000446876 RPH3AQ9Y2J0 694 aaPredicted RBP13.49□□□□□ -0.25
HDAC4-204ENST00000446876 CACNA1CQ13936 2221 aa13.49□□□□□ -0.25
HDAC4-204ENST00000446876 FIGNL2A6NMB9 653 aa13.48□□□□□ -0.25
HDAC4-204ENST00000446876 KDM4EB2RXH2 506 aaPredicted RBP13.48□□□□□ -0.25
HDAC4-204ENST00000446876 ANGPTL1O95841 491 aa13.48□□□□□ -0.25
HDAC4-204ENST00000446876 PGRP06401 933 aa13.48□□□□□ -0.25
HDAC4-204ENST00000446876 MATN1P21941 496 aa13.48□□□□□ -0.25
HDAC4-204ENST00000446876 ACVR2AP27037 513 aa13.48□□□□□ -0.25
HDAC4-204ENST00000446876 SRD5A2P31213 254 aa13.48□□□□□ -0.25
HDAC4-204ENST00000446876 ZFP36L2P47974 494 aaKnown RBP13.48□□□□□ -0.25
HDAC4-204ENST00000446876 AQP5P55064 265 aa13.48□□□□□ -0.25
HDAC4-204ENST00000446876 NUP107P57740 925 aa13.48□□□□□ -0.25
HDAC4-204ENST00000446876 DCST2Q5T1A1 773 aa13.48□□□□□ -0.25
HDAC4-204ENST00000446876 DNAJC14Q6Y2X3 702 aaPredicted RBP13.48□□□□□ -0.25
HDAC4-204ENST00000446876 ACAD11Q709F0 780 aa13.48□□□□□ -0.25
HDAC4-204ENST00000446876 FADS6Q8N9I5 356 aa13.48□□□□□ -0.25
HDAC4-204ENST00000446876 DUSP19Q8WTR2 217 aa13.48□□□□□ -0.25
HDAC4-204ENST00000446876 CCDC115Q96NT0 180 aa13.48□□□□□ -0.25
HDAC4-204ENST00000446876 OR52E6Q96RD3 313 aa13.48□□□□□ -0.25
HDAC4-204ENST00000446876 TIMP4Q99727 224 aa13.48□□□□□ -0.25
HDAC4-204ENST00000446876 TCF7L2Q9NQB0 619 aa13.48□□□□□ -0.25
HDAC4-204ENST00000446876 TAS2R10Q9NYW0 307 aa13.48□□□□□ -0.25
HDAC4-204ENST00000446876 NBPF19A0A087WUL8 3843 aa13.47□□□□□ -0.25
HDAC4-204ENST00000446876 POLR3GO15318 223 aaPredicted RBP13.47□□□□□ -0.25
HDAC4-204ENST00000446876 SLC22A3O75751 556 aa13.47□□□□□ -0.25
HDAC4-204ENST00000446876 GSNP06396 782 aa13.47□□□□□ -0.25
HDAC4-204ENST00000446876 KRT16P08779 473 aa13.47□□□□□ -0.25
HDAC4-204ENST00000446876 UQCRC2P22695 453 aa13.47□□□□□ -0.25
HDAC4-204ENST00000446876 DPP4P27487 766 aa13.47□□□□□ -0.25
HDAC4-204ENST00000446876 GRNP28799 593 aaKnown RBP13.47□□□□□ -0.25
HDAC4-204ENST00000446876 CLK3P49761 638 aaKnown RBP13.47□□□□□ -0.25
HDAC4-204ENST00000446876 SMSP52788 366 aa13.47□□□□□ -0.25
HDAC4-204ENST00000446876 PMPCAQ10713 525 aa13.47□□□□□ -0.25
HDAC4-204ENST00000446876 GSTA3Q16772 222 aa13.47□□□□□ -0.25
HDAC4-204ENST00000446876 C1orf185Q5T7R7 199 aa13.47□□□□□ -0.25
HDAC4-204ENST00000446876 VASNQ6EMK4 673 aa13.47□□□□□ -0.25
HDAC4-204ENST00000446876 TNFAIP8L2Q6P589 184 aaPredicted RBP13.47□□□□□ -0.25
HDAC4-204ENST00000446876 IFNEQ86WN2 208 aa13.47□□□□□ -0.25
HDAC4-204ENST00000446876 CCDC71Q8IV32 467 aaPredicted RBP13.47□□□□□ -0.25
HDAC4-204ENST00000446876 ULK2Q8IYT8 1036 aa13.47□□□□□ -0.25
HDAC4-204ENST00000446876 EID3Q8N140 333 aa13.47□□□□□ -0.25
HDAC4-204ENST00000446876 VPS37AQ8NEZ2 397 aa13.47□□□□□ -0.25
HDAC4-204ENST00000446876 ABTB1Q969K4 478 aaPredicted RBP13.47□□□□□ -0.25
HDAC4-204ENST00000446876 SDCCAG3Q96C92 435 aa13.47□□□□□ -0.25
HDAC4-204ENST00000446876 KLHDC3Q9BQ90 382 aa13.47□□□□□ -0.25
HDAC4-204ENST00000446876 SLC35A5Q9BS91 424 aa13.47□□□□□ -0.25
HDAC4-204ENST00000446876 OR51I1Q9H343 314 aa13.47□□□□□ -0.25
HDAC4-204ENST00000446876 SDR39U1Q9NRG7 319 aaPredicted RBP13.47□□□□□ -0.25
HDAC4-204ENST00000446876 ZIM2Q9NZV7 527 aa13.47□□□□□ -0.25
HDAC4-204ENST00000446876 BTNL2Q9UIR0 455 aa13.47□□□□□ -0.25
HDAC4-204ENST00000446876 CAMK2AQ9UQM7 478 aa13.47□□□□□ -0.25
HDAC4-204ENST00000446876 ALG1L2C9J202 215 aa13.46□□□□□ -0.25
HDAC4-204ENST00000446876 PRSS44E7EML9 344 aa13.46□□□□□ -0.25
HDAC4-204ENST00000446876 ZIC3O60481 467 aa13.46□□□□□ -0.25
HDAC4-204ENST00000446876 WDR1O75083 606 aa13.46□□□□□ -0.25
HDAC4-204ENST00000446876 TGDSO95455 350 aa13.46□□□□□ -0.25
HDAC4-204ENST00000446876 OR12D1P0DN82 309 aa13.46□□□□□ -0.25
HDAC4-204ENST00000446876 GLI4P10075 376 aa13.46□□□□□ -0.25
HDAC4-204ENST00000446876 ATP6V1C1P21283 382 aa13.46□□□□□ -0.25
HDAC4-204ENST00000446876 TBXA2RP21731 343 aa13.46□□□□□ -0.25
HDAC4-204ENST00000446876 CHI3L1P36222 383 aaPredicted RBP13.46□□□□□ -0.25
HDAC4-204ENST00000446876 STARP49675 285 aa13.46□□□□□ -0.25
HDAC4-204ENST00000446876 CD226Q15762 336 aa13.46□□□□□ -0.25
HDAC4-204ENST00000446876 TIGD2Q4W5G0 525 aa13.46□□□□□ -0.25
HDAC4-204ENST00000446876 NHSL2Q5HYW2 709 aa13.46□□□□□ -0.25
HDAC4-204ENST00000446876 SAXO2Q658L1 398 aa13.46□□□□□ -0.25
HDAC4-204ENST00000446876 TMEM211Q6ICI0 200 aa13.46□□□□□ -0.25
HDAC4-204ENST00000446876 BHLHB9Q6PI77 547 aa13.46□□□□□ -0.25
HDAC4-204ENST00000446876 B3GNT6Q6ZMB0 384 aa13.46□□□□□ -0.25
HDAC4-204ENST00000446876 MIER2Q8N344 545 aa13.46□□□□□ -0.25
HDAC4-204ENST00000446876 GLB1L3Q8NCI6 653 aaPredicted RBP13.46□□□□□ -0.25
HDAC4-204ENST00000446876 OR5M1Q8NGP8 315 aa13.46□□□□□ -0.25
HDAC4-204ENST00000446876 GOT1L1Q8NHS2 421 aaPredicted RBP13.46□□□□□ -0.25
HDAC4-204ENST00000446876 RAB8BQ92930 207 aa13.46□□□□□ -0.25
HDAC4-204ENST00000446876 WDYHV1Q96HA8 205 aa13.46□□□□□ -0.25
HDAC4-204ENST00000446876 SH3YL1Q96HL8 342 aaPredicted RBP13.46□□□□□ -0.25
HDAC4-204ENST00000446876 SFXN2Q96NB2 322 aa13.46□□□□□ -0.25
HDAC4-204ENST00000446876 PANX1Q96RD7 426 aa13.46□□□□□ -0.25
HDAC4-204ENST00000446876 TTYH2Q9BSA4 534 aa13.46□□□□□ -0.25
HDAC4-204ENST00000446876 G6PC3Q9BUM1 346 aa13.46□□□□□ -0.25
HDAC4-204ENST00000446876 PRDM14Q9GZV8 571 aa13.46□□□□□ -0.25
HDAC4-204ENST00000446876 SDHAF3Q9NRP4 125 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms