RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 OR8J1Q8NGP2 316 aa16.2■□□□□ 0.18
SMC6-206ENST00000446852 TRUB1Q8WWH5 349 aaKnown RBP16.2■□□□□ 0.18
SMC6-206ENST00000446852 LMF2Q9BU23 707 aaKnown RBP16.2■□□□□ 0.18
SMC6-206ENST00000446852 TVP23BQ9NYZ1 205 aa16.2■□□□□ 0.18
SMC6-206ENST00000446852 SLC7A7Q9UM01 511 aa16.2■□□□□ 0.18
SMC6-206ENST00000446852 EFCAB10A6NFE3 127 aa16.2■□□□□ 0.18
SMC6-206ENST00000446852 PIP5K1CO60331 668 aa16.2■□□□□ 0.18
SMC6-206ENST00000446852 CD36P16671 472 aa16.2■□□□□ 0.18
SMC6-206ENST00000446852 PTNP21246 168 aa16.2■□□□□ 0.18
SMC6-206ENST00000446852 IFNA8P32881 189 aa16.2■□□□□ 0.18
SMC6-206ENST00000446852 RFX3P48380 749 aa16.2■□□□□ 0.18
SMC6-206ENST00000446852 SEPHS1P49903 392 aa16.2■□□□□ 0.18
SMC6-206ENST00000446852 LSM3P62310 102 aaKnown RBP16.2■□□□□ 0.18
SMC6-206ENST00000446852 TSPAN31Q12999 210 aa16.2■□□□□ 0.18
SMC6-206ENST00000446852 WDR45BQ5MNZ6 344 aa16.2■□□□□ 0.18
SMC6-206ENST00000446852 OR51Q1Q8NH59 317 aa16.2■□□□□ 0.18
SMC6-206ENST00000446852 GNPDA2Q8TDQ7 276 aa16.2■□□□□ 0.18
SMC6-206ENST00000446852 RPL3LQ92901 407 aaKnown RBP16.2■□□□□ 0.18
SMC6-206ENST00000446852 ARSGQ96EG1 525 aa16.2■□□□□ 0.18
SMC6-206ENST00000446852 CD180Q99467 661 aa16.2■□□□□ 0.18
SMC6-206ENST00000446852 H3BMH7 237 aa16.19■□□□□ 0.18
SMC6-206ENST00000446852 NUDT21O43809 227 aaKnown RBP16.19■□□□□ 0.18
SMC6-206ENST00000446852 HYAL3O43820 417 aaPredicted RBP16.19■□□□□ 0.18
SMC6-206ENST00000446852 IFNGR2P38484 337 aa16.19■□□□□ 0.18
SMC6-206ENST00000446852 MLLT10P55197 1068 aa16.19■□□□□ 0.18
SMC6-206ENST00000446852 TIGD6Q17RP2 521 aa16.19■□□□□ 0.18
SMC6-206ENST00000446852 NRMQ8IXM6 262 aa16.19■□□□□ 0.18
SMC6-206ENST00000446852 CACTIN-AS1Q8N1I8 211 aa16.19■□□□□ 0.18
SMC6-206ENST00000446852 NDNFQ8TB73 568 aa16.19■□□□□ 0.18
SMC6-206ENST00000446852 PIGXQ8TBF5 258 aa16.19■□□□□ 0.18
SMC6-206ENST00000446852 ADAMTS18Q8TE60 1221 aa16.19■□□□□ 0.18
SMC6-206ENST00000446852 AHCYL2Q96HN2 611 aaKnown RBP16.19■□□□□ 0.18
SMC6-206ENST00000446852 VSTM2LQ96N03 204 aa16.19■□□□□ 0.18
SMC6-206ENST00000446852 BCL7BQ9BQE9 202 aa16.19■□□□□ 0.18
SMC6-206ENST00000446852 POLDIP3Q9BY77 421 aaKnown RBP16.19■□□□□ 0.18
SMC6-206ENST00000446852 MAU2Q9Y6X3 613 aa16.19■□□□□ 0.18
SMC6-206ENST00000446852 TNRC6BQ9UPQ9 1833 aaKnown RBP16.19■□□□□ 0.18
SMC6-206ENST00000446852 FER1L5A0AVI2 2057 aa16.19■□□□□ 0.18
SMC6-206ENST00000446852 A0A1B0GVG6 124 aa16.19■□□□□ 0.18
SMC6-206ENST00000446852 BLACEA4D250 179 aa16.19■□□□□ 0.18
SMC6-206ENST00000446852 CLDN4O14493 209 aa16.19■□□□□ 0.18
SMC6-206ENST00000446852 IGKV1D-16P01601 117 aa16.19■□□□□ 0.18
SMC6-206ENST00000446852 CD1CP29017 333 aa16.19■□□□□ 0.18
SMC6-206ENST00000446852 PCYT1AP49585 367 aa16.19■□□□□ 0.18
SMC6-206ENST00000446852 ENTPD1P49961 510 aa16.19■□□□□ 0.18
SMC6-206ENST00000446852 VBP1P61758 197 aa16.19■□□□□ 0.18
SMC6-206ENST00000446852 AMZ1Q400G9 498 aa16.19■□□□□ 0.18
SMC6-206ENST00000446852 AP1ARQ63HQ0 302 aa16.19■□□□□ 0.18
SMC6-206ENST00000446852 RANBP3LQ86VV4 465 aaPredicted RBP16.19■□□□□ 0.18
SMC6-206ENST00000446852 FGF11Q92914 225 aa16.19■□□□□ 0.18
SMC6-206ENST00000446852 DGAT2Q96PD7 388 aa16.19■□□□□ 0.18
SMC6-206ENST00000446852 PRSS27Q9BQR3 290 aa16.19■□□□□ 0.18
SMC6-206ENST00000446852 CDCA4Q9BXL8 241 aa16.19■□□□□ 0.18
SMC6-206ENST00000446852 OCEL1Q9H607 264 aa16.19■□□□□ 0.18
SMC6-206ENST00000446852 WDR87Q6ZQQ6 2873 aa16.18■□□□□ 0.18
SMC6-206ENST00000446852 DMDP11532 3685 aa16.18■□□□□ 0.18
SMC6-206ENST00000446852 KLF4O43474 513 aa16.18■□□□□ 0.18
SMC6-206ENST00000446852 PIPP12273 146 aaPredicted RBP16.18■□□□□ 0.18
SMC6-206ENST00000446852 CSF2RBP32927 897 aa16.18■□□□□ 0.18
SMC6-206ENST00000446852 GPR3P46089 330 aa16.18■□□□□ 0.18
SMC6-206ENST00000446852 GPR4P46093 362 aa16.18■□□□□ 0.18
SMC6-206ENST00000446852 EFNB1P98172 346 aa16.18■□□□□ 0.18
SMC6-206ENST00000446852 DOC2BQ14184 412 aa16.18■□□□□ 0.18
SMC6-206ENST00000446852 ZNF267Q14586 743 aaPredicted RBP16.18■□□□□ 0.18
SMC6-206ENST00000446852 GRM7Q14831 915 aa16.18■□□□□ 0.18
SMC6-206ENST00000446852 FLYWCH1Q4VC44 716 aa16.18■□□□□ 0.18
SMC6-206ENST00000446852 MFSD4BQ5TF39 518 aa16.18■□□□□ 0.18
SMC6-206ENST00000446852 PLAG1Q6DJT9 500 aa16.18■□□□□ 0.18
SMC6-206ENST00000446852 NPSR1Q6W5P4 371 aa16.18■□□□□ 0.18
SMC6-206ENST00000446852 MBOAT2Q6ZWT7 520 aa16.18■□□□□ 0.18
SMC6-206ENST00000446852 RRM2BQ7LG56 351 aa16.18■□□□□ 0.18
SMC6-206ENST00000446852 POGLUT1Q8NBL1 392 aa16.18■□□□□ 0.18
SMC6-206ENST00000446852 Q96MT0 163 aa16.18■□□□□ 0.18
SMC6-206ENST00000446852 FRYLO94915 3013 aa16.18■□□□□ 0.18
SMC6-206ENST00000446852 H0YIG0 161 aa16.18■□□□□ 0.18
SMC6-206ENST00000446852 SLC22A1O15245 554 aa16.18■□□□□ 0.18
SMC6-206ENST00000446852 ZNF749O43361 778 aa16.18■□□□□ 0.18
SMC6-206ENST00000446852 TLX2O43763 284 aaPredicted RBP16.18■□□□□ 0.18
SMC6-206ENST00000446852 NCS1P62166 190 aa16.18■□□□□ 0.18
SMC6-206ENST00000446852 BNC1Q01954 994 aa16.18■□□□□ 0.18
SMC6-206ENST00000446852 SHBQ15464 509 aa16.18■□□□□ 0.18
SMC6-206ENST00000446852 OCLNQ16625 522 aa16.18■□□□□ 0.18
SMC6-206ENST00000446852 WDR88Q6ZMY6 472 aa16.18■□□□□ 0.18
SMC6-206ENST00000446852 RASSF6Q6ZTQ3 369 aa16.18■□□□□ 0.18
SMC6-206ENST00000446852 C11orf74Q86VG3 221 aa16.18■□□□□ 0.18
SMC6-206ENST00000446852 UBALD2Q8IYN6 164 aa16.18■□□□□ 0.18
SMC6-206ENST00000446852 Q8N9G6 341 aaPredicted RBP16.18■□□□□ 0.18
SMC6-206ENST00000446852 CNPPD1Q9BV87 410 aa16.18■□□□□ 0.18
SMC6-206ENST00000446852 NECTIN3Q9NQS3 549 aa16.18■□□□□ 0.18
SMC6-206ENST00000446852 POLE3Q9NRF9 147 aa16.18■□□□□ 0.18
SMC6-206ENST00000446852 NUP210LQ5VU65 1888 aa16.17■□□□□ 0.18
SMC6-206ENST00000446852 FPR3P25089 353 aa16.17■□□□□ 0.18
SMC6-206ENST00000446852 SMSP52788 366 aa16.17■□□□□ 0.18
SMC6-206ENST00000446852 EMP3P54852 163 aa16.17■□□□□ 0.18
SMC6-206ENST00000446852 HSD17B7P56937 341 aa16.17■□□□□ 0.18
SMC6-206ENST00000446852 ZNF91Q05481 1191 aa16.17■□□□□ 0.18
SMC6-206ENST00000446852 DCTN2Q13561 401 aaKnown RBP16.17■□□□□ 0.18
SMC6-206ENST00000446852 SYT14P1Q58G82 188 aa16.17■□□□□ 0.18
SMC6-206ENST00000446852 SNAP47Q5SQN1 464 aa16.17■□□□□ 0.18
SMC6-206ENST00000446852 PDZK1Q5T2W1 519 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms