RNA–Protein interactions for RNA: ENST00000445357.1

NCLP1-201, Transcript of nucleolin pseudogene 1, humanhuman

BASIC

Gene NCLP1, Length 1,963 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP1-201ENST00000445357 MAP4K2Q12851 820 aa13.16□□□□□ -0.3
NCLP1-201ENST00000445357 COL9A2Q14055 689 aaPredicted RBP13.16□□□□□ -0.3
NCLP1-201ENST00000445357 AGAP7PQ5VUJ5 663 aa13.16□□□□□ -0.3
NCLP1-201ENST00000445357 RANBP3LQ86VV4 465 aaPredicted RBP13.16□□□□□ -0.3
NCLP1-201ENST00000445357 SLC22A16Q86VW1 577 aa13.16□□□□□ -0.3
NCLP1-201ENST00000445357 RBM12BQ8IXT5 1001 aaKnown RBP13.16□□□□□ -0.3
NCLP1-201ENST00000445357 TMEFF1Q8IYR6 380 aa13.16□□□□□ -0.3
NCLP1-201ENST00000445357 OR5T3Q8NGG3 340 aa13.16□□□□□ -0.3
NCLP1-201ENST00000445357 TMEM255BQ8WV15 326 aa13.16□□□□□ -0.3
NCLP1-201ENST00000445357 PRSS27Q9BQR3 290 aa13.16□□□□□ -0.3
NCLP1-201ENST00000445357 CNPPD1Q9BV87 410 aa13.16□□□□□ -0.3
NCLP1-201ENST00000445357 TEX12Q9BXU0 123 aa13.16□□□□□ -0.3
NCLP1-201ENST00000445357 EXOSC4Q9NPD3 245 aaKnown RBP13.16□□□□□ -0.3
NCLP1-201ENST00000445357 KRCC1Q9NPI7 259 aaPredicted RBP13.16□□□□□ -0.3
NCLP1-201ENST00000445357 NLGN3Q9NZ94 848 aa13.16□□□□□ -0.3
NCLP1-201ENST00000445357 C2CD4DB7Z1M9 353 aa13.16□□□□□ -0.3
NCLP1-201ENST00000445357 STK25O00506 426 aa13.16□□□□□ -0.3
NCLP1-201ENST00000445357 SURF4O15260 269 aa13.16□□□□□ -0.3
NCLP1-201ENST00000445357 PIP5K1CO60331 668 aa13.16□□□□□ -0.3
NCLP1-201ENST00000445357 FMO6PO60774 539 aa13.16□□□□□ -0.3
NCLP1-201ENST00000445357 CELA2BP08218 269 aaPredicted RBP13.16□□□□□ -0.3
NCLP1-201ENST00000445357 NID1P14543 1247 aa13.16□□□□□ -0.3
NCLP1-201ENST00000445357 NT5EP21589 574 aa13.16□□□□□ -0.3
NCLP1-201ENST00000445357 GPR4P46093 362 aa13.16□□□□□ -0.3
NCLP1-201ENST00000445357 RAB38P57729 211 aa13.16□□□□□ -0.3
NCLP1-201ENST00000445357 FZD2Q14332 565 aa13.16□□□□□ -0.3
NCLP1-201ENST00000445357 GPR68Q15743 365 aa13.16□□□□□ -0.3
NCLP1-201ENST00000445357 MAPK14Q16539 360 aa13.16□□□□□ -0.3
NCLP1-201ENST00000445357 PGGHGQ32M88 737 aa13.16□□□□□ -0.3
NCLP1-201ENST00000445357 CCNJQ5T5M9 372 aa13.16□□□□□ -0.3
NCLP1-201ENST00000445357 AADACL4Q5VUY2 407 aa13.16□□□□□ -0.3
NCLP1-201ENST00000445357 OOSP2Q86WS3 158 aa13.16□□□□□ -0.3
NCLP1-201ENST00000445357 SFTPA2Q8IWL1 248 aa13.16□□□□□ -0.3
NCLP1-201ENST00000445357 COX18Q8N8Q8 333 aa13.16□□□□□ -0.3
NCLP1-201ENST00000445357 HOXB13Q92826 284 aaPredicted RBP13.16□□□□□ -0.3
NCLP1-201ENST00000445357 RFKQ969G6 155 aa13.16□□□□□ -0.3
NCLP1-201ENST00000445357 CTHRC1Q96CG8 243 aa13.16□□□□□ -0.3
NCLP1-201ENST00000445357 TRMT61AQ96FX7 289 aaKnown RBP13.16□□□□□ -0.3
NCLP1-201ENST00000445357 MSANTD3Q96H12 275 aa13.16□□□□□ -0.3
NCLP1-201ENST00000445357 TTYH1Q9H313 450 aaPredicted RBP13.16□□□□□ -0.3
NCLP1-201ENST00000445357 POLE3Q9NRF9 147 aa13.16□□□□□ -0.3
NCLP1-201ENST00000445357 ABCB10Q9NRK6 738 aa13.16□□□□□ -0.3
NCLP1-201ENST00000445357 CHCHD3Q9NX63 227 aaKnown RBP13.16□□□□□ -0.3
NCLP1-201ENST00000445357 KLHL3Q9UH77 587 aa13.16□□□□□ -0.3
NCLP1-201ENST00000445357 SLC7A7Q9UM01 511 aa13.16□□□□□ -0.3
NCLP1-201ENST00000445357 SSR3Q9UNL2 185 aa13.16□□□□□ -0.3
NCLP1-201ENST00000445357 GPR52Q9Y2T5 361 aa13.16□□□□□ -0.3
NCLP1-201ENST00000445357 EYSQ5T1H1 3165 aa13.16□□□□□ -0.3
NCLP1-201ENST00000445357 TRAPPC13A5PLN9 417 aa13.15□□□□□ -0.3
NCLP1-201ENST00000445357 TBX1O43435 398 aa13.15□□□□□ -0.3
NCLP1-201ENST00000445357 LYPD3O95274 346 aa13.15□□□□□ -0.3
NCLP1-201ENST00000445357 RPS19P39019 145 aaKnown RBP13.15□□□□□ -0.3
NCLP1-201ENST00000445357 DNASE1L3Q13609 305 aa13.15□□□□□ -0.3
NCLP1-201ENST00000445357 TPBGQ13641 420 aa13.15□□□□□ -0.3
NCLP1-201ENST00000445357 FLYWCH1Q4VC44 716 aa13.15□□□□□ -0.3
NCLP1-201ENST00000445357 CLEC12AQ5QGZ9 265 aa13.15□□□□□ -0.3
NCLP1-201ENST00000445357 LIPKQ5VXJ0 399 aa13.15□□□□□ -0.3
NCLP1-201ENST00000445357 STEAP3Q658P3 488 aa13.15□□□□□ -0.3
NCLP1-201ENST00000445357 SLC30A6Q6NXT4 461 aa13.15□□□□□ -0.3
NCLP1-201ENST00000445357 TAF8Q7Z7C8 310 aa13.15□□□□□ -0.3
NCLP1-201ENST00000445357 SHISA5Q8N114 240 aa13.15□□□□□ -0.3
NCLP1-201ENST00000445357 ARHGEF39Q8N4T4 335 aa13.15□□□□□ -0.3
NCLP1-201ENST00000445357 ITPKCQ96DU7 683 aa13.15□□□□□ -0.3
NCLP1-201ENST00000445357 SMURF1Q9HCE7 757 aa13.15□□□□□ -0.3
NCLP1-201ENST00000445357 CPNE5Q9HCH3 593 aa13.15□□□□□ -0.3
NCLP1-201ENST00000445357 KCNE5Q9UJ90 142 aa13.15□□□□□ -0.3
NCLP1-201ENST00000445357 ZNF223Q9UK11 482 aaPredicted RBP13.15□□□□□ -0.3
NCLP1-201ENST00000445357 POMT2Q9UKY4 750 aa13.15□□□□□ -0.3
NCLP1-201ENST00000445357 CARD8Q9Y2G2 431 aa13.15□□□□□ -0.3
NCLP1-201ENST00000445357 TDRD6O60522 2096 aaKnown RBP13.15□□□□□ -0.3
NCLP1-201ENST00000445357 CDHR4A6H8M9 788 aa13.14□□□□□ -0.31
NCLP1-201ENST00000445357 LOC110117498-PIK3R3F6TDL0 507 aa13.14□□□□□ -0.31
NCLP1-201ENST00000445357 HMGN1P05114 100 aa13.14□□□□□ -0.31
NCLP1-201ENST00000445357 THEGLP0DJG4 465 aa13.14□□□□□ -0.31
NCLP1-201ENST00000445357 HTR2AP28223 471 aa13.14□□□□□ -0.31
NCLP1-201ENST00000445357 NUDT1P36639 197 aa13.14□□□□□ -0.31
NCLP1-201ENST00000445357 VSX2P58304 361 aaPredicted RBP13.14□□□□□ -0.31
NCLP1-201ENST00000445357 PPP1CAP62136 330 aa13.14□□□□□ -0.31
NCLP1-201ENST00000445357 MRPL2Q5T653 305 aaKnown RBP13.14□□□□□ -0.31
NCLP1-201ENST00000445357 RNF113BQ8IZP6 322 aaKnown RBP13.14□□□□□ -0.31
NCLP1-201ENST00000445357 ZNF485Q8NCK3 441 aa13.14□□□□□ -0.31
NCLP1-201ENST00000445357 BRIX1Q8TDN6 353 aaKnown RBP13.14□□□□□ -0.31
NCLP1-201ENST00000445357 PIK3R3Q92569 461 aa13.14□□□□□ -0.31
NCLP1-201ENST00000445357 ANKRD9Q96BM1 317 aaPredicted RBP13.14□□□□□ -0.31
NCLP1-201ENST00000445357 TOE1Q96GM8 510 aaKnown RBP13.14□□□□□ -0.31
NCLP1-201ENST00000445357 SEMA6CQ9H3T2 930 aa13.14□□□□□ -0.31
NCLP1-201ENST00000445357 EVA1AQ9H8M9 152 aa13.14□□□□□ -0.31
NCLP1-201ENST00000445357 PCDHGB6Q9Y5F9 930 aa13.14□□□□□ -0.31
NCLP1-201ENST00000445357 MN1Q10571 1320 aaPredicted RBP13.14□□□□□ -0.31
NCLP1-201ENST00000445357 WWP2O00308 870 aa13.14□□□□□ -0.31
NCLP1-201ENST00000445357 NKX2-2O95096 273 aa13.14□□□□□ -0.31
NCLP1-201ENST00000445357 GUSBP08236 651 aa13.14□□□□□ -0.31
NCLP1-201ENST00000445357 CT62P0C5K7 136 aa13.14□□□□□ -0.31
NCLP1-201ENST00000445357 SLC35E2P0CK97 266 aa13.14□□□□□ -0.31
NCLP1-201ENST00000445357 LIMS3P0CW19 117 aa13.14□□□□□ -0.31
NCLP1-201ENST00000445357 LIMS4P0CW20 117 aa13.14□□□□□ -0.31
NCLP1-201ENST00000445357 CDH11P55287 796 aa13.14□□□□□ -0.31
NCLP1-201ENST00000445357 SPANXN2Q5MJ10 180 aa13.14□□□□□ -0.31
NCLP1-201ENST00000445357 NXNL2Q5VZ03 156 aa13.14□□□□□ -0.31
NCLP1-201ENST00000445357 GALNT12Q8IXK2 581 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms