RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 FESP07332 822 aa13.48□□□□□ -0.25
TNFRSF1A-204ENST00000440083 CHRM4P08173 479 aa13.48□□□□□ -0.25
TNFRSF1A-204ENST00000440083 CELA2AP08217 269 aa13.48□□□□□ -0.25
TNFRSF1A-204ENST00000440083 ALOX5P09917 674 aa13.48□□□□□ -0.25
TNFRSF1A-204ENST00000440083 SLC35E2P0CK97 266 aa13.48□□□□□ -0.25
TNFRSF1A-204ENST00000440083 COX6A1P12074 109 aa13.48□□□□□ -0.25
TNFRSF1A-204ENST00000440083 ETS2P15036 469 aa13.48□□□□□ -0.25
TNFRSF1A-204ENST00000440083 CDH12P55289 794 aa13.48□□□□□ -0.25
TNFRSF1A-204ENST00000440083 MYBPC1Q00872 1141 aa13.48□□□□□ -0.25
TNFRSF1A-204ENST00000440083 IL1RL1Q01638 556 aa13.48□□□□□ -0.25
TNFRSF1A-204ENST00000440083 ZNF155Q12901 538 aaPredicted RBP13.48□□□□□ -0.25
TNFRSF1A-204ENST00000440083 RAPSNQ13702 412 aa13.48□□□□□ -0.25
TNFRSF1A-204ENST00000440083 LY6DQ14210 128 aa13.48□□□□□ -0.25
TNFRSF1A-204ENST00000440083 GK3PQ14409 553 aa13.48□□□□□ -0.25
TNFRSF1A-204ENST00000440083 TMEM205Q6UW68 189 aa13.48□□□□□ -0.25
TNFRSF1A-204ENST00000440083 ANKRD37Q7Z713 158 aa13.48□□□□□ -0.25
TNFRSF1A-204ENST00000440083 TAGAPQ8N103 731 aa13.48□□□□□ -0.25
TNFRSF1A-204ENST00000440083 ATG16L2Q8NAA4 619 aa13.48□□□□□ -0.25
TNFRSF1A-204ENST00000440083 SLC9A6Q92581 669 aa13.48□□□□□ -0.25
TNFRSF1A-204ENST00000440083 ANKRD9Q96BM1 317 aaPredicted RBP13.48□□□□□ -0.25
TNFRSF1A-204ENST00000440083 GIMAP5Q96F15 307 aa13.48□□□□□ -0.25
TNFRSF1A-204ENST00000440083 RMND5BQ96G75 393 aaPredicted RBP13.48□□□□□ -0.25
TNFRSF1A-204ENST00000440083 FBXL20Q96IG2 436 aa13.48□□□□□ -0.25
TNFRSF1A-204ENST00000440083 ZNF354BQ96LW1 612 aa13.48□□□□□ -0.25
TNFRSF1A-204ENST00000440083 DGAT2Q96PD7 388 aa13.48□□□□□ -0.25
TNFRSF1A-204ENST00000440083 TRNT1Q96Q11 434 aaKnown RBP13.48□□□□□ -0.25
TNFRSF1A-204ENST00000440083 PIP5K1AQ99755 562 aa13.48□□□□□ -0.25
TNFRSF1A-204ENST00000440083 PELOQ9BRX2 385 aaKnown RBP13.48□□□□□ -0.25
TNFRSF1A-204ENST00000440083 ANKRA2Q9H9E1 313 aa13.48□□□□□ -0.25
TNFRSF1A-204ENST00000440083 ZNF160Q9HCG1 818 aa13.48□□□□□ -0.25
TNFRSF1A-204ENST00000440083 ADAP2Q9NPF8 381 aa13.48□□□□□ -0.25
TNFRSF1A-204ENST00000440083 NECTIN3Q9NQS3 549 aa13.48□□□□□ -0.25
TNFRSF1A-204ENST00000440083 C19orf53Q9UNZ5 99 aaPredicted RBP13.48□□□□□ -0.25
TNFRSF1A-204ENST00000440083 SLC9A8Q9Y2E8 581 aa13.48□□□□□ -0.25
TNFRSF1A-204ENST00000440083 MYRFQ9Y2G1 1151 aa13.48□□□□□ -0.25
TNFRSF1A-204ENST00000440083 ERVH48-1M5A8F1 160 aa13.47□□□□□ -0.25
TNFRSF1A-204ENST00000440083 PLOD3O60568 738 aa13.47□□□□□ -0.25
TNFRSF1A-204ENST00000440083 SEC24DO94855 1032 aaPredicted RBP13.47□□□□□ -0.25
TNFRSF1A-204ENST00000440083 H6PDO95479 791 aa13.47□□□□□ -0.25
TNFRSF1A-204ENST00000440083 RHCEP18577 417 aa13.47□□□□□ -0.25
TNFRSF1A-204ENST00000440083 PRKACGP22612 351 aa13.47□□□□□ -0.25
TNFRSF1A-204ENST00000440083 YAP1P46937 504 aaKnown RBP13.47□□□□□ -0.25
TNFRSF1A-204ENST00000440083 KCNJ5P48544 419 aa13.47□□□□□ -0.25
TNFRSF1A-204ENST00000440083 CCL11P51671 97 aa13.47□□□□□ -0.25
TNFRSF1A-204ENST00000440083 ADARB1P78563 741 aaKnown RBP13.47□□□□□ -0.25
TNFRSF1A-204ENST00000440083 Q0VFX4 171 aa13.47□□□□□ -0.25
TNFRSF1A-204ENST00000440083 FUT5Q11128 374 aa13.47□□□□□ -0.25
TNFRSF1A-204ENST00000440083 PCOLCEQ15113 449 aa13.47□□□□□ -0.25
TNFRSF1A-204ENST00000440083 MAPK11Q15759 364 aa13.47□□□□□ -0.25
TNFRSF1A-204ENST00000440083 CYP27C1Q4G0S4 372 aa13.47□□□□□ -0.25
TNFRSF1A-204ENST00000440083 DCAF10Q5QP82 559 aa13.47□□□□□ -0.25
TNFRSF1A-204ENST00000440083 FHL5Q5TD97 284 aa13.47□□□□□ -0.25
TNFRSF1A-204ENST00000440083 ZCCHC12Q6PEW1 402 aa13.47□□□□□ -0.25
TNFRSF1A-204ENST00000440083 TTC33Q6PID6 262 aaPredicted RBP13.47□□□□□ -0.25
TNFRSF1A-204ENST00000440083 APLFQ8IW19 511 aaPredicted RBP13.47□□□□□ -0.25
TNFRSF1A-204ENST00000440083 GALNT12Q8IXK2 581 aa13.47□□□□□ -0.25
TNFRSF1A-204ENST00000440083 OFCC1Q8IZS5 231 aa13.47□□□□□ -0.25
TNFRSF1A-204ENST00000440083 VWA5B2Q8N398 1253 aa13.47□□□□□ -0.25
TNFRSF1A-204ENST00000440083 CDRT4Q8N9R6 151 aa13.47□□□□□ -0.25
TNFRSF1A-204ENST00000440083 GPR32P1Q8NGA4 272 aa13.47□□□□□ -0.25
TNFRSF1A-204ENST00000440083 VANGL1Q8TAA9 524 aaPredicted RBP13.47□□□□□ -0.25
TNFRSF1A-204ENST00000440083 GIPC3Q8TF64 312 aa13.47□□□□□ -0.25
TNFRSF1A-204ENST00000440083 PTCHD1Q96NR3 888 aa13.47□□□□□ -0.25
TNFRSF1A-204ENST00000440083 MBOAT4Q96T53 435 aa13.47□□□□□ -0.25
TNFRSF1A-204ENST00000440083 ARHGAP9Q9BRR9 750 aa13.47□□□□□ -0.25
TNFRSF1A-204ENST00000440083 PINK1Q9BXM7 581 aa13.47□□□□□ -0.25
TNFRSF1A-204ENST00000440083 MRPS26Q9BYN8 205 aaKnown RBP13.47□□□□□ -0.25
TNFRSF1A-204ENST00000440083 SEMA4CQ9C0C4 833 aa13.47□□□□□ -0.25
TNFRSF1A-204ENST00000440083 AMBRA1Q9C0C7 1298 aa13.47□□□□□ -0.25
TNFRSF1A-204ENST00000440083 KRT84Q9NSB2 600 aa13.47□□□□□ -0.25
TNFRSF1A-204ENST00000440083 MAT2BQ9NZL9 334 aa13.47□□□□□ -0.25
TNFRSF1A-204ENST00000440083 LOC102723996A0A087X1L8 192 aa13.46□□□□□ -0.25
TNFRSF1A-204ENST00000440083 IGKV3D-11A0A0A0MRZ8 115 aa13.46□□□□□ -0.25
TNFRSF1A-204ENST00000440083 IGHV1-45A0A0A0MS14 117 aa13.46□□□□□ -0.25
TNFRSF1A-204ENST00000440083 PRAMEF27A3QJZ7 478 aa13.46□□□□□ -0.25
TNFRSF1A-204ENST00000440083 K7EM74 188 aa13.46□□□□□ -0.25
TNFRSF1A-204ENST00000440083 CTNSO60931 367 aa13.46□□□□□ -0.25
TNFRSF1A-204ENST00000440083 GADD45GO95257 159 aa13.46□□□□□ -0.25
TNFRSF1A-204ENST00000440083 AK1P00568 194 aa13.46□□□□□ -0.25
TNFRSF1A-204ENST00000440083 ITGAMP11215 1152 aa13.46□□□□□ -0.25
TNFRSF1A-204ENST00000440083 MAN2A2P49641 1150 aa13.46□□□□□ -0.25
TNFRSF1A-204ENST00000440083 SMIM11AP58511 58 aa13.46□□□□□ -0.25
TNFRSF1A-204ENST00000440083 KCNAB2Q13303 367 aa13.46□□□□□ -0.25
TNFRSF1A-204ENST00000440083 LAPTM4AQ15012 233 aa13.46□□□□□ -0.25
TNFRSF1A-204ENST00000440083 NSDHLQ15738 373 aa13.46□□□□□ -0.25
TNFRSF1A-204ENST00000440083 DUSP7Q16829 419 aa13.46□□□□□ -0.25
TNFRSF1A-204ENST00000440083 PRICKLE4Q2TBC4 344 aa13.46□□□□□ -0.25
TNFRSF1A-204ENST00000440083 IQCCQ4KMZ1 466 aa13.46□□□□□ -0.25
TNFRSF1A-204ENST00000440083 DEF8Q6ZN54 512 aa13.46□□□□□ -0.25
TNFRSF1A-204ENST00000440083 QSOX2Q6ZRP7 698 aa13.46□□□□□ -0.25
TNFRSF1A-204ENST00000440083 C8orf59Q8N0T1 100 aaPredicted RBP13.46□□□□□ -0.25
TNFRSF1A-204ENST00000440083 ZNF786Q8N393 782 aa13.46□□□□□ -0.25
TNFRSF1A-204ENST00000440083 PLPP5Q8NEB5 264 aa13.46□□□□□ -0.25
TNFRSF1A-204ENST00000440083 OR10G2Q8NGC3 310 aa13.46□□□□□ -0.25
TNFRSF1A-204ENST00000440083 PHF10Q8WUB8 498 aaKnown RBP13.46□□□□□ -0.25
TNFRSF1A-204ENST00000440083 METTL21AQ8WXB1 218 aa13.46□□□□□ -0.25
TNFRSF1A-204ENST00000440083 CDS1Q92903 461 aa13.46□□□□□ -0.25
TNFRSF1A-204ENST00000440083 IP6K3Q96PC2 410 aa13.46□□□□□ -0.25
TNFRSF1A-204ENST00000440083 UBL7Q96S82 380 aaPredicted RBP13.46□□□□□ -0.25
TNFRSF1A-204ENST00000440083 WDR77Q9BQA1 342 aaPredicted RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms