RNA–Protein interactions for RNA: ENST00000440053.1

VIL1-204, Transcript of villin 1, humanhuman

TSL 1 (best) BASIC

Gene VIL1, Length 1,454 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIL1-204ENST00000440053 COQ8BQ96D53 544 aa18.76■□□□□ 0.59
VIL1-204ENST00000440053 MS4A4EQ96PG1 132 aa18.76■□□□□ 0.59
VIL1-204ENST00000440053 SH3GL2Q99962 352 aa18.76■□□□□ 0.59
VIL1-204ENST00000440053 PAIP2Q9BPZ3 127 aaKnown RBP18.76■□□□□ 0.59
VIL1-204ENST00000440053 ZNF559Q9BR84 538 aa18.76■□□□□ 0.59
VIL1-204ENST00000440053 TBL1XR1Q9BZK7 514 aa18.76■□□□□ 0.59
VIL1-204ENST00000440053 CXorf36Q9H7Y0 433 aa18.76■□□□□ 0.59
VIL1-204ENST00000440053 AKTIPQ9H8T0 292 aa18.76■□□□□ 0.59
VIL1-204ENST00000440053 ZCCHC3Q9NUD5 404 aaKnown RBP18.76■□□□□ 0.59
VIL1-204ENST00000440053 ITGB1BP2Q9UKP3 347 aa18.76■□□□□ 0.59
VIL1-204ENST00000440053 AKAP9Q99996 3911 aa18.76■□□□□ 0.59
VIL1-204ENST00000440053 OTOGQ6ZRI0 2925 aa18.75■□□□□ 0.59
VIL1-204ENST00000440053 TTC36A6NLP5 189 aa18.75■□□□□ 0.59
VIL1-204ENST00000440053 TM9SF1O15321 606 aa18.75■□□□□ 0.59
VIL1-204ENST00000440053 HMGN2P05204 90 aaKnown RBP18.75■□□□□ 0.59
VIL1-204ENST00000440053 ZNF708P17019 499 aa18.75■□□□□ 0.59
VIL1-204ENST00000440053 CHMP24386 653 aa18.75■□□□□ 0.59
VIL1-204ENST00000440053 CTSSP25774 331 aa18.75■□□□□ 0.59
VIL1-204ENST00000440053 CLK3P49761 638 aaKnown RBP18.75■□□□□ 0.59
VIL1-204ENST00000440053 PSMD4P55036 377 aaKnown RBP18.75■□□□□ 0.59
VIL1-204ENST00000440053 DIO3P55073 304 aa18.75■□□□□ 0.59
VIL1-204ENST00000440053 EXOSC6Q5RKV6 272 aaKnown RBP18.75■□□□□ 0.59
VIL1-204ENST00000440053 OR5P2Q8WZ92 322 aa18.75■□□□□ 0.59
VIL1-204ENST00000440053 JADE3Q92613 823 aa18.75■□□□□ 0.59
VIL1-204ENST00000440053 KLHDC3Q9BQ90 382 aa18.75■□□□□ 0.59
VIL1-204ENST00000440053 PNPOQ9NVS9 261 aa18.75■□□□□ 0.59
VIL1-204ENST00000440053 EIF3LQ9Y262 564 aaKnown RBP18.75■□□□□ 0.59
VIL1-204ENST00000440053 KCNE3Q9Y6H6 103 aa18.75■□□□□ 0.59
VIL1-204ENST00000440053 POLQO75417 2590 aa18.75■□□□□ 0.59
VIL1-204ENST00000440053 OXSR1O95747 527 aaPredicted RBP18.74■□□□□ 0.59
VIL1-204ENST00000440053 TGM6O95932 706 aa18.74■□□□□ 0.59
VIL1-204ENST00000440053 ALOX5P09917 674 aa18.74■□□□□ 0.59
VIL1-204ENST00000440053 TMIGD3P0DMS9 266 aaPredicted RBP18.74■□□□□ 0.59
VIL1-204ENST00000440053 CCT3P49368 545 aaKnown RBP18.74■□□□□ 0.59
VIL1-204ENST00000440053 SUCLG1P53597 346 aaKnown RBP18.74■□□□□ 0.59
VIL1-204ENST00000440053 PRR5P85299 388 aa18.74■□□□□ 0.59
VIL1-204ENST00000440053 EMX2Q04743 252 aa18.74■□□□□ 0.59
VIL1-204ENST00000440053 LASP1Q14847 261 aaKnown RBP18.74■□□□□ 0.59
VIL1-204ENST00000440053 PGS1Q32NB8 556 aa18.74■□□□□ 0.59
VIL1-204ENST00000440053 RAET1LQ5VY80 246 aa18.74■□□□□ 0.59
VIL1-204ENST00000440053 ANKRD42Q8N9B4 389 aa18.74■□□□□ 0.59
VIL1-204ENST00000440053 CDS1Q92903 461 aa18.74■□□□□ 0.59
VIL1-204ENST00000440053 INTS12Q96CB8 462 aaKnown RBP18.74■□□□□ 0.59
VIL1-204ENST00000440053 C1GALT1C1Q96EU7 318 aa18.74■□□□□ 0.59
VIL1-204ENST00000440053 CHMP6Q96FZ7 201 aa18.74■□□□□ 0.59
VIL1-204ENST00000440053 RAP2CQ9Y3L5 183 aa18.74■□□□□ 0.59
VIL1-204ENST00000440053 PCNX3Q9H6A9 2034 aa18.74■□□□□ 0.59
VIL1-204ENST00000440053 OR2M5A3KFT3 312 aa18.73■□□□□ 0.59
VIL1-204ENST00000440053 PRPS1L1P21108 318 aa18.73■□□□□ 0.59
VIL1-204ENST00000440053 RNF144AP50876 292 aaPredicted RBP18.73■□□□□ 0.59
VIL1-204ENST00000440053 RPL14P50914 215 aaKnown RBP18.73■□□□□ 0.59
VIL1-204ENST00000440053 C17orf67Q0P5P2 114 aa18.73■□□□□ 0.59
VIL1-204ENST00000440053 ZZZ3Q8IYH5 903 aa18.73■□□□□ 0.59
VIL1-204ENST00000440053 GCNT2Q8N0V5 402 aa18.73■□□□□ 0.59
VIL1-204ENST00000440053 CLEC4FQ8N1N0 589 aa18.73■□□□□ 0.59
VIL1-204ENST00000440053 NPAS1Q99742 590 aa18.73■□□□□ 0.59
VIL1-204ENST00000440053 CLCF1Q9UBD9 225 aa18.73■□□□□ 0.59
VIL1-204ENST00000440053 KCNN3Q9UGI6 736 aa18.73■□□□□ 0.59
VIL1-204ENST00000440053 RCBTB2O95199 551 aa18.72■□□□□ 0.59
VIL1-204ENST00000440053 ZWINTO95229 277 aa18.72■□□□□ 0.59
VIL1-204ENST00000440053 RPL3P39023 403 aaKnown RBP18.72■□□□□ 0.59
VIL1-204ENST00000440053 ASCL1P50553 236 aa18.72■□□□□ 0.59
VIL1-204ENST00000440053 STX3Q13277 289 aa18.72■□□□□ 0.59
VIL1-204ENST00000440053 TP53BP2Q13625 1128 aa18.72■□□□□ 0.59
VIL1-204ENST00000440053 COX18Q8N8Q8 333 aa18.72■□□□□ 0.59
VIL1-204ENST00000440053 OR5AK3PQ8NH89 298 aa18.72■□□□□ 0.59
VIL1-204ENST00000440053 NRGNQ92686 78 aa18.72■□□□□ 0.59
VIL1-204ENST00000440053 RNASE6Q93091 150 aaKnown RBP18.72■□□□□ 0.59
VIL1-204ENST00000440053 WNT2BQ93097 391 aa18.72■□□□□ 0.59
VIL1-204ENST00000440053 PGM2Q96G03 612 aa18.72■□□□□ 0.59
VIL1-204ENST00000440053 DUSP26Q9BV47 211 aa18.72■□□□□ 0.59
VIL1-204ENST00000440053 PTGES2Q9H7Z7 377 aa18.72■□□□□ 0.59
VIL1-204ENST00000440053 CRIM1Q9NZV1 1036 aa18.72■□□□□ 0.59
VIL1-204ENST00000440053 VDAC3Q9Y277 283 aa18.72■□□□□ 0.59
VIL1-204ENST00000440053 NPIPA5A0A0B4J1W7 369 aa18.71■□□□□ 0.59
VIL1-204ENST00000440053 EEF1E1-BLOC1S5C9J1V9 151 aa18.71■□□□□ 0.59
VIL1-204ENST00000440053 NPIPA7E9PJI5 369 aa18.71■□□□□ 0.59
VIL1-204ENST00000440053 H3BML4 177 aa18.71■□□□□ 0.59
VIL1-204ENST00000440053 CFLARO15519 480 aa18.71■□□□□ 0.59
VIL1-204ENST00000440053 EEF1E1O43324 174 aaKnown RBP18.71■□□□□ 0.59
VIL1-204ENST00000440053 MYZAPP0CAP1 466 aa18.71■□□□□ 0.59
VIL1-204ENST00000440053 NPIPA8P0DM63 369 aa18.71■□□□□ 0.59
VIL1-204ENST00000440053 POU3F2P20265 443 aaPredicted RBP18.71■□□□□ 0.59
VIL1-204ENST00000440053 TBXA2RP21731 343 aa18.71■□□□□ 0.59
VIL1-204ENST00000440053 KIR2DL3P43628 341 aa18.71■□□□□ 0.59
VIL1-204ENST00000440053 PRIM2P49643 509 aa18.71■□□□□ 0.59
VIL1-204ENST00000440053 CLDN8P56748 225 aa18.71■□□□□ 0.59
VIL1-204ENST00000440053 CLDN20P56880 219 aa18.71■□□□□ 0.59
VIL1-204ENST00000440053 WDR4P57081 412 aaKnown RBP18.71■□□□□ 0.59
VIL1-204ENST00000440053 HBA1P69905 142 aa18.71■□□□□ 0.59
VIL1-204ENST00000440053 POU6F2P78424 691 aaPredicted RBP18.71■□□□□ 0.59
VIL1-204ENST00000440053 BCL2A1Q16548 175 aa18.71■□□□□ 0.59
VIL1-204ENST00000440053 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.71■□□□□ 0.59
VIL1-204ENST00000440053 SPDYE7PQ495Y7 208 aa18.71■□□□□ 0.59
VIL1-204ENST00000440053 OR4F3Q6IEY1 312 aa18.71■□□□□ 0.59
VIL1-204ENST00000440053 ZCCHC12Q6PEW1 402 aa18.71■□□□□ 0.59
VIL1-204ENST00000440053 CLECL1Q8IZS7 167 aa18.71■□□□□ 0.59
VIL1-204ENST00000440053 PSMA8Q8TAA3 256 aa18.71■□□□□ 0.59
VIL1-204ENST00000440053 UCN2Q96RP3 112 aa18.71■□□□□ 0.59
VIL1-204ENST00000440053 PRPF18Q99633 342 aaKnown RBP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms