RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 PLA2G15Q8NCC3 412 aa12.54□□□□□ -0.4
ACTN1-204ENST00000438964 ADAMTS19Q8TE59 1207 aa12.54□□□□□ -0.4
ACTN1-204ENST00000438964 YIPF5Q969M3 257 aa12.54□□□□□ -0.4
ACTN1-204ENST00000438964 ZNF436Q9C0F3 470 aaPredicted RBP12.54□□□□□ -0.4
ACTN1-204ENST00000438964 ENKD1Q9H0I2 346 aa12.54□□□□□ -0.4
ACTN1-204ENST00000438964 NT5DC2Q9H857 520 aa12.54□□□□□ -0.4
ACTN1-204ENST00000438964 BRF2Q9HAW0 419 aa12.54□□□□□ -0.4
ACTN1-204ENST00000438964 MGAT4CQ9UBM8 478 aa12.54□□□□□ -0.4
ACTN1-204ENST00000438964 FBXL4Q9UKA2 621 aa12.54□□□□□ -0.4
ACTN1-204ENST00000438964 BAIAP2Q9UQB8 552 aa12.54□□□□□ -0.4
ACTN1-204ENST00000438964 PRR23D1E9PI22 279 aaPredicted RBP12.53□□□□□ -0.4
ACTN1-204ENST00000438964 J3QLW9 94 aa12.53□□□□□ -0.4
ACTN1-204ENST00000438964 ARPC1BO15143 372 aaKnown RBP12.53□□□□□ -0.4
ACTN1-204ENST00000438964 MMP20O60882 483 aa12.53□□□□□ -0.4
ACTN1-204ENST00000438964 EGFP01133 1207 aa12.53□□□□□ -0.4
ACTN1-204ENST00000438964 PRR23D2P0DMB1 279 aaPredicted RBP12.53□□□□□ -0.4
ACTN1-204ENST00000438964 ZNF19P17023 458 aa12.53□□□□□ -0.4
ACTN1-204ENST00000438964 HMGA1P17096 107 aaKnown RBP12.53□□□□□ -0.4
ACTN1-204ENST00000438964 ANXA7P20073 488 aaKnown RBP12.53□□□□□ -0.4
ACTN1-204ENST00000438964 THBS2P35442 1172 aa12.53□□□□□ -0.4
ACTN1-204ENST00000438964 FNTBP49356 437 aa12.53□□□□□ -0.4
ACTN1-204ENST00000438964 DEFA5Q01523 94 aa12.53□□□□□ -0.4
ACTN1-204ENST00000438964 ZNF322Q6U7Q0 402 aaPredicted RBP12.53□□□□□ -0.4
ACTN1-204ENST00000438964 TRMT11Q7Z4G4 463 aaKnown RBP12.53□□□□□ -0.4
ACTN1-204ENST00000438964 LRRC28Q86X40 367 aaPredicted RBP12.53□□□□□ -0.4
ACTN1-204ENST00000438964 CYB561A3Q8NBI2 242 aa12.53□□□□□ -0.4
ACTN1-204ENST00000438964 OR51Q1Q8NH59 317 aa12.53□□□□□ -0.4
ACTN1-204ENST00000438964 RPLP0P6Q8NHW5 317 aa12.53□□□□□ -0.4
ACTN1-204ENST00000438964 SLC38A2Q96QD8 506 aa12.53□□□□□ -0.4
ACTN1-204ENST00000438964 REG4Q9BYZ8 158 aa12.53□□□□□ -0.4
ACTN1-204ENST00000438964 SEMA4GQ9NTN9 838 aa12.53□□□□□ -0.4
ACTN1-204ENST00000438964 ZCCHC3Q9NUD5 404 aaKnown RBP12.53□□□□□ -0.4
ACTN1-204ENST00000438964 TET1Q8NFU7 2136 aa12.53□□□□□ -0.4
ACTN1-204ENST00000438964 MEIKINA0A087WXM9 373 aa12.53□□□□□ -0.4
ACTN1-204ENST00000438964 FAM74A7A6NL05 159 aa12.53□□□□□ -0.4
ACTN1-204ENST00000438964 SLC19A2O60779 497 aa12.53□□□□□ -0.4
ACTN1-204ENST00000438964 TRHRP34981 398 aaPredicted RBP12.53□□□□□ -0.4
ACTN1-204ENST00000438964 FAM74A3Q4VXF1 159 aa12.53□□□□□ -0.4
ACTN1-204ENST00000438964 CD276Q5ZPR3 534 aa12.53□□□□□ -0.4
ACTN1-204ENST00000438964 METAP1DQ6UB28 335 aaPredicted RBP12.53□□□□□ -0.4
ACTN1-204ENST00000438964 C3P1Q6ZMU1 363 aa12.53□□□□□ -0.4
ACTN1-204ENST00000438964 NRMQ8IXM6 262 aa12.53□□□□□ -0.4
ACTN1-204ENST00000438964 RFLNBQ8N5W9 214 aa12.53□□□□□ -0.4
ACTN1-204ENST00000438964 DCAF4L2Q8NA75 395 aa12.53□□□□□ -0.4
ACTN1-204ENST00000438964 OR51L1Q8NGJ5 315 aa12.53□□□□□ -0.4
ACTN1-204ENST00000438964 SLC5A11Q8WWX8 675 aa12.53□□□□□ -0.4
ACTN1-204ENST00000438964 UPF1Q92900 1129 aaKnown RBP eCLIP12.53□□□□□ -0.46e-12■■□□□ 13.4
ACTN1-204ENST00000438964 WNT2BQ93097 391 aa12.53□□□□□ -0.4
ACTN1-204ENST00000438964 WBP1Q96G27 269 aa12.53□□□□□ -0.4
ACTN1-204ENST00000438964 SAMD8Q96LT4 415 aa12.53□□□□□ -0.4
ACTN1-204ENST00000438964 FUZQ9BT04 418 aa12.53□□□□□ -0.4
ACTN1-204ENST00000438964 IFT46Q9NQC8 304 aa12.53□□□□□ -0.4
ACTN1-204ENST00000438964 MRPL39Q9NYK5 338 aaKnown RBP12.53□□□□□ -0.4
ACTN1-204ENST00000438964 GPR160Q9UJ42 338 aa12.53□□□□□ -0.4
ACTN1-204ENST00000438964 EXOSC1Q9Y3B2 195 aaKnown RBP12.53□□□□□ -0.4
ACTN1-204ENST00000438964 AK6Q9Y3D8 172 aaKnown RBP12.53□□□□□ -0.4
ACTN1-204ENST00000438964 PCDHGA9Q9Y5G4 932 aaKnown RBP12.53□□□□□ -0.4
ACTN1-204ENST00000438964 AGAP14A8MT82 685 aa12.52□□□□□ -0.4
ACTN1-204ENST00000438964 L7N2F9 121 aa12.52□□□□□ -0.4
ACTN1-204ENST00000438964 PLPP1O14494 284 aa12.52□□□□□ -0.4
ACTN1-204ENST00000438964 NPC1O15118 1278 aa12.52□□□□□ -0.4
ACTN1-204ENST00000438964 INPPL1O15357 1258 aa12.52□□□□□ -0.4
ACTN1-204ENST00000438964 CKMP06732 381 aa12.52□□□□□ -0.4
ACTN1-204ENST00000438964 CHRM4P08173 479 aa12.52□□□□□ -0.4
ACTN1-204ENST00000438964 DRD2P14416 443 aa12.52□□□□□ -0.4
ACTN1-204ENST00000438964 TPMTP51580 245 aa12.52□□□□□ -0.4
ACTN1-204ENST00000438964 LINGO2Q7L985 606 aa12.52□□□□□ -0.4
ACTN1-204ENST00000438964 FGF11Q92914 225 aa12.52□□□□□ -0.4
ACTN1-204ENST00000438964 NARS2Q96I59 477 aaKnown RBP12.52□□□□□ -0.4
ACTN1-204ENST00000438964 ERMAPQ96PL5 475 aaPredicted RBP12.52□□□□□ -0.4
ACTN1-204ENST00000438964 ALG8Q9BVK2 526 aa12.52□□□□□ -0.4
ACTN1-204ENST00000438964 TMEM168Q9H0V1 697 aa12.52□□□□□ -0.4
ACTN1-204ENST00000438964 C20orf85Q9H1P6 137 aa12.52□□□□□ -0.4
ACTN1-204ENST00000438964 FGF20Q9NP95 211 aaPredicted RBP12.52□□□□□ -0.4
ACTN1-204ENST00000438964 H2AFY2Q9P0M6 372 aaPredicted RBP12.52□□□□□ -0.4
ACTN1-204ENST00000438964 DYRK1BQ9Y463 629 aa12.52□□□□□ -0.4
ACTN1-204ENST00000438964 ARRDC5A6NEK1 342 aa12.52□□□□□ -0.41
ACTN1-204ENST00000438964 ANKRD61A6NGH8 418 aa12.52□□□□□ -0.41
ACTN1-204ENST00000438964 ANXA2P2A6NMY6 339 aa12.52□□□□□ -0.41
ACTN1-204ENST00000438964 RGS9O75916 674 aaPredicted RBP12.52□□□□□ -0.41
ACTN1-204ENST00000438964 SPDEFO95238 335 aa12.52□□□□□ -0.41
ACTN1-204ENST00000438964 CFL1P23528 166 aaKnown RBP12.52□□□□□ -0.41
ACTN1-204ENST00000438964 FAM74A1Q5RGS3 127 aa12.52□□□□□ -0.41
ACTN1-204ENST00000438964 PLEKHS1Q5SXH7 462 aa12.52□□□□□ -0.41
ACTN1-204ENST00000438964 C18orf63Q68DL7 685 aa12.52□□□□□ -0.41
ACTN1-204ENST00000438964 SLC6A19Q695T7 634 aa12.52□□□□□ -0.41
ACTN1-204ENST00000438964 HBMQ6B0K9 141 aa12.52□□□□□ -0.41
ACTN1-204ENST00000438964 TRAPPC5Q8IUR0 188 aa12.52□□□□□ -0.41
ACTN1-204ENST00000438964 SLAIN1Q8ND83 568 aa12.52□□□□□ -0.41
ACTN1-204ENST00000438964 ASB12Q8WXK4 309 aa12.52□□□□□ -0.41
ACTN1-204ENST00000438964 MARVELD3Q96A59 401 aa12.52□□□□□ -0.41
ACTN1-204ENST00000438964 VOPP1Q96AW1 172 aa12.52□□□□□ -0.41
ACTN1-204ENST00000438964 FOPNLQ96NB1 174 aa12.52□□□□□ -0.41
ACTN1-204ENST00000438964 ZNF607Q96SK3 696 aa12.52□□□□□ -0.41
ACTN1-204ENST00000438964 KLF16Q9BXK1 252 aaPredicted RBP12.52□□□□□ -0.41
ACTN1-204ENST00000438964 TTYH1Q9H313 450 aaPredicted RBP12.52□□□□□ -0.41
ACTN1-204ENST00000438964 FKRPQ9H9S5 495 aa12.52□□□□□ -0.41
ACTN1-204ENST00000438964 SLC35C2Q9NQQ7 365 aa12.52□□□□□ -0.41
ACTN1-204ENST00000438964 KLK11Q9UBX7 282 aa12.52□□□□□ -0.41
ACTN1-204ENST00000438964 LHX6Q9UPM6 363 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms