RNA–Protein interactions for RNA: ENST00000438120.5

PTPRF-209, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRF, Length 6,377 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-209ENST00000438120 PAQR5Q9NXK6 330 aaPredicted RBP16.2■□□□□ 0.18
PTPRF-209ENST00000438120 PCDHA9Q9Y5H5 950 aa16.2■□□□□ 0.18
PTPRF-209ENST00000438120 LRP6O75581 1613 aa16.2■□□□□ 0.18
PTPRF-209ENST00000438120 ZNF28P17035 718 aa16.2■□□□□ 0.18
PTPRF-209ENST00000438120 KCNIP1Q9NZI2 227 aa16.2■□□□□ 0.18
PTPRF-209ENST00000438120 PRSS38A1L453 326 aa16.2■□□□□ 0.18
PTPRF-209ENST00000438120 DCTP40126 519 aa16.2■□□□□ 0.18
PTPRF-209ENST00000438120 GABARAPL2P60520 117 aa16.2■□□□□ 0.18
PTPRF-209ENST00000438120 ERVK-25P63136 954 aa16.2■□□□□ 0.18
PTPRF-209ENST00000438120 GPR157Q5UAW9 335 aa16.2■□□□□ 0.18
PTPRF-209ENST00000438120 MCATQ8IVS2 390 aaKnown RBP16.2■□□□□ 0.18
PTPRF-209ENST00000438120 C3orf30Q96M34 536 aa16.2■□□□□ 0.18
PTPRF-209ENST00000438120 UBQLN2Q9UHD9 624 aa16.2■□□□□ 0.18
PTPRF-209ENST00000438120 A0A1W2PQL4 384 aaPredicted RBP16.2■□□□□ 0.18
PTPRF-209ENST00000438120 ZNF616Q08AN1 781 aa16.2■□□□□ 0.18
PTPRF-209ENST00000438120 SERTAD2Q14140 314 aa16.2■□□□□ 0.18
PTPRF-209ENST00000438120 DCST2Q5T1A1 773 aa16.2■□□□□ 0.18
PTPRF-209ENST00000438120 HTR3DQ70Z44 454 aa16.2■□□□□ 0.18
PTPRF-209ENST00000438120 ADOQ96SZ5 270 aa16.2■□□□□ 0.18
PTPRF-209ENST00000438120 RTP3Q9BQQ7 232 aa16.2■□□□□ 0.18
PTPRF-209ENST00000438120 CUEDC1Q9NWM3 386 aaPredicted RBP16.2■□□□□ 0.18
PTPRF-209ENST00000438120 BTNL2Q9UIR0 455 aa16.2■□□□□ 0.18
PTPRF-209ENST00000438120 MEIS3P1A6NDR6 274 aa16.2■□□□□ 0.18
PTPRF-209ENST00000438120 NKX2-5P52952 324 aaPredicted RBP16.2■□□□□ 0.18
PTPRF-209ENST00000438120 HAGHLQ6PII5 290 aaPredicted RBP16.2■□□□□ 0.18
PTPRF-209ENST00000438120 MS4A15Q8N5U1 240 aa16.2■□□□□ 0.18
PTPRF-209ENST00000438120 TMEM239Q8WW34 195 aa16.2■□□□□ 0.18
PTPRF-209ENST00000438120 TOMM40LQ969M1 308 aa16.2■□□□□ 0.18
PTPRF-209ENST00000438120 MSANTD3Q96H12 275 aa16.2■□□□□ 0.18
PTPRF-209ENST00000438120 SLC30A3Q99726 388 aa16.2■□□□□ 0.18
PTPRF-209ENST00000438120 CACNG6Q9BXT2 260 aa16.2■□□□□ 0.18
PTPRF-209ENST00000438120 SLC6A16Q9GZN6 736 aa16.2■□□□□ 0.18
PTPRF-209ENST00000438120 VSX1Q9NZR4 365 aaPredicted RBP16.2■□□□□ 0.18
PTPRF-209ENST00000438120 EIF3FO00303 357 aaPredicted RBP16.19■□□□□ 0.18
PTPRF-209ENST00000438120 DENRO43583 198 aaKnown RBP16.19■□□□□ 0.18
PTPRF-209ENST00000438120 CTBSQ01459 385 aa16.19■□□□□ 0.18
PTPRF-209ENST00000438120 TUBB3Q13509 450 aa16.19■□□□□ 0.18
PTPRF-209ENST00000438120 TMEFF1Q8IYR6 380 aa16.19■□□□□ 0.18
PTPRF-209ENST00000438120 OR5H2Q8NGV7 314 aa16.19■□□□□ 0.18
PTPRF-209ENST00000438120 TMIGD2Q96BF3 282 aa16.19■□□□□ 0.18
PTPRF-209ENST00000438120 ZNF696Q9H7X3 374 aa16.19■□□□□ 0.18
PTPRF-209ENST00000438120 ZNF160Q9HCG1 818 aa16.19■□□□□ 0.18
PTPRF-209ENST00000438120 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.19■□□□□ 0.18
PTPRF-209ENST00000438120 RNASET2O00584 256 aaKnown RBP16.19■□□□□ 0.18
PTPRF-209ENST00000438120 TNFSF12O43508 249 aa16.19■□□□□ 0.18
PTPRF-209ENST00000438120 ARG2P78540 354 aa16.19■□□□□ 0.18
PTPRF-209ENST00000438120 TRAV27A0A087WT01 109 aa16.19■□□□□ 0.18
PTPRF-209ENST00000438120 TVP23AA6NH52 213 aa16.19■□□□□ 0.18
PTPRF-209ENST00000438120 CREBL2O60519 120 aaPredicted RBP16.19■□□□□ 0.18
PTPRF-209ENST00000438120 CSNK2A1P68400 391 aaPredicted RBP16.19■□□□□ 0.18
PTPRF-209ENST00000438120 TMEM184AQ6ZMB5 413 aa16.19■□□□□ 0.18
PTPRF-209ENST00000438120 CSNK2A3Q8NEV1 391 aa16.19■□□□□ 0.18
PTPRF-209ENST00000438120 SLC29A1Q99808 456 aa16.19■□□□□ 0.18
PTPRF-209ENST00000438120 GDE1Q9NZC3 331 aa16.19■□□□□ 0.18
PTPRF-209ENST00000438120 MAGED1Q9Y5V3 778 aaPredicted RBP16.19■□□□□ 0.18
PTPRF-209ENST00000438120 NUDT21O43809 227 aaKnown RBP16.19■□□□□ 0.18
PTPRF-209ENST00000438120 UBL4AP11441 157 aa16.19■□□□□ 0.18
PTPRF-209ENST00000438120 EPHA1P21709 976 aa16.19■□□□□ 0.18
PTPRF-209ENST00000438120 HLA-FP30511 346 aa16.19■□□□□ 0.18
PTPRF-209ENST00000438120 CTSL3PQ5NE16 218 aa16.19■□□□□ 0.18
PTPRF-209ENST00000438120 EGLN2Q96KS0 407 aa16.19■□□□□ 0.18
PTPRF-209ENST00000438120 MYH8P13535 1937 aa16.19■□□□□ 0.18
PTPRF-209ENST00000438120 HIDE1A8MVS5 230 aa16.19■□□□□ 0.18
PTPRF-209ENST00000438120 PRSS48Q7RTY5 328 aa16.19■□□□□ 0.18
PTPRF-209ENST00000438120 MRPL43Q8N983 215 aaKnown RBP16.19■□□□□ 0.18
PTPRF-209ENST00000438120 OR5W2Q8NH69 310 aa16.19■□□□□ 0.18
PTPRF-209ENST00000438120 GOSR2O14653 212 aa16.18■□□□□ 0.18
PTPRF-209ENST00000438120 GPX3P22352 226 aa16.18■□□□□ 0.18
PTPRF-209ENST00000438120 CD34P28906 385 aa16.18■□□□□ 0.18
PTPRF-209ENST00000438120 SNRPD2P62316 118 aaKnown RBP16.18■□□□□ 0.18
PTPRF-209ENST00000438120 EEF1A2Q05639 463 aaKnown RBP16.18■□□□□ 0.18
PTPRF-209ENST00000438120 LYSMD4Q5XG99 296 aa16.18■□□□□ 0.18
PTPRF-209ENST00000438120 GLYATL2Q8WU03 294 aa16.18■□□□□ 0.18
PTPRF-209ENST00000438120 MAFIPQ8WZ33 124 aa16.18■□□□□ 0.18
PTPRF-209ENST00000438120 PCDH10Q9P2E7 1040 aa16.18■□□□□ 0.18
PTPRF-209ENST00000438120 KRBA1A5PL33 1030 aa16.18■□□□□ 0.18
PTPRF-209ENST00000438120 GJE1A6NN92 205 aa16.18■□□□□ 0.18
PTPRF-209ENST00000438120 MPIG6BO95866 241 aa16.18■□□□□ 0.18
PTPRF-209ENST00000438120 FGF4P08620 206 aa16.18■□□□□ 0.18
PTPRF-209ENST00000438120 PRPS1P60891 318 aa16.18■□□□□ 0.18
PTPRF-209ENST00000438120 USF2Q15853 346 aaPredicted RBP16.18■□□□□ 0.18
PTPRF-209ENST00000438120 UNQ6126/PRO20091Q6UXV3 157 aa16.18■□□□□ 0.18
PTPRF-209ENST00000438120 BAIAP2L2Q6UXY1 529 aa16.18■□□□□ 0.18
PTPRF-209ENST00000438120 OR13J1Q8NGT2 312 aa16.18■□□□□ 0.18
PTPRF-209ENST00000438120 KLHL15Q96M94 604 aa16.18■□□□□ 0.18
PTPRF-209ENST00000438120 ST6GALNAC5Q9BVH7 336 aa16.18■□□□□ 0.18
PTPRF-209ENST00000438120 TXLNGYQ9BZA5 131 aa16.18■□□□□ 0.18
PTPRF-209ENST00000438120 ADAM18Q9Y3Q7 739 aa16.18■□□□□ 0.18
PTPRF-209ENST00000438120 ENTPD2Q9Y5L3 495 aa16.18■□□□□ 0.18
PTPRF-209ENST00000438120 SULT2B1O00204 365 aa16.18■□□□□ 0.18
PTPRF-209ENST00000438120 UGDHO60701 494 aa16.18■□□□□ 0.18
PTPRF-209ENST00000438120 RPS17P08708 135 aaKnown RBP16.18■□□□□ 0.18
PTPRF-209ENST00000438120 IL7P13232 177 aa16.18■□□□□ 0.18
PTPRF-209ENST00000438120 NR0B2Q15466 257 aa16.18■□□□□ 0.18
PTPRF-209ENST00000438120 VRK2Q86Y07 508 aa16.18■□□□□ 0.18
PTPRF-209ENST00000438120 SERPINA12Q8IW75 414 aa16.18■□□□□ 0.18
PTPRF-209ENST00000438120 ARL14Q8N4G2 192 aa16.18■□□□□ 0.18
PTPRF-209ENST00000438120 RANBP3Q9H6Z4 567 aaPredicted RBP16.18■□□□□ 0.18
PTPRF-209ENST00000438120 HSPE1-MOB4S4R3N1 261 aa16.18■□□□□ 0.18
PTPRF-209ENST00000438120 BOLA2-SMG1P6H3BVE0 249 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms