RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 REG4Q9BYZ8 158 aa12.71□□□□□ -0.37
LINC01088-201ENST00000437737 LYARQ9NX58 379 aaKnown RBP12.71□□□□□ -0.37
LINC01088-201ENST00000437737 TAS2R10Q9NYW0 307 aa12.71□□□□□ -0.37
LINC01088-201ENST00000437737 DCTN4Q9UJW0 460 aa12.71□□□□□ -0.37
LINC01088-201ENST00000437737 TRIM33Q9UPN9 1127 aa12.71□□□□□ -0.37
LINC01088-201ENST00000437737 EXO1Q9UQ84 846 aaKnown RBP12.71□□□□□ -0.37
LINC01088-201ENST00000437737 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.7□□□□□ -0.38
LINC01088-201ENST00000437737 SERTM1A2A2V5 107 aa12.7□□□□□ -0.38
LINC01088-201ENST00000437737 SLC22A20A6NK97 555 aa12.7□□□□□ -0.38
LINC01088-201ENST00000437737 H0YIV9 168 aa12.7□□□□□ -0.38
LINC01088-201ENST00000437737 SLC28A1O00337 649 aa12.7□□□□□ -0.38
LINC01088-201ENST00000437737 PLPP1O14494 284 aa12.7□□□□□ -0.38
LINC01088-201ENST00000437737 HCRTR2O43614 444 aa12.7□□□□□ -0.38
LINC01088-201ENST00000437737 CD5LO43866 347 aa12.7□□□□□ -0.38
LINC01088-201ENST00000437737 CT62P0C5K7 136 aa12.7□□□□□ -0.38
LINC01088-201ENST00000437737 PCSK2P16519 638 aa12.7□□□□□ -0.38
LINC01088-201ENST00000437737 ZNF708P17019 499 aa12.7□□□□□ -0.38
LINC01088-201ENST00000437737 TCEA1P23193 301 aaKnown RBP12.7□□□□□ -0.38
LINC01088-201ENST00000437737 PTGDSP41222 190 aa12.7□□□□□ -0.38
LINC01088-201ENST00000437737 CLDN18P56856 261 aa12.7□□□□□ -0.38
LINC01088-201ENST00000437737 IRX1P78414 480 aaPredicted RBP12.7□□□□□ -0.38
LINC01088-201ENST00000437737 FUT7Q11130 342 aa12.7□□□□□ -0.38
LINC01088-201ENST00000437737 UGT3A2Q3SY77 523 aa12.7□□□□□ -0.38
LINC01088-201ENST00000437737 METTL21CQ5VZV1 264 aa12.7□□□□□ -0.38
LINC01088-201ENST00000437737 CLEC6AQ6EIG7 209 aa12.7□□□□□ -0.38
LINC01088-201ENST00000437737 CYP20A1Q6UW02 462 aa12.7□□□□□ -0.38
LINC01088-201ENST00000437737 EPGNQ6UW88 154 aa12.7□□□□□ -0.38
LINC01088-201ENST00000437737 NUP54Q7Z3B4 507 aa12.7□□□□□ -0.38
LINC01088-201ENST00000437737 ZNF615Q8N8J6 731 aa12.7□□□□□ -0.38
LINC01088-201ENST00000437737 C17orf47Q8NEP4 570 aa12.7□□□□□ -0.38
LINC01088-201ENST00000437737 OR7G3Q8NG95 312 aa12.7□□□□□ -0.38
LINC01088-201ENST00000437737 TWIST2Q8WVJ9 160 aa12.7□□□□□ -0.38
LINC01088-201ENST00000437737 HGDQ93099 445 aa12.7□□□□□ -0.38
LINC01088-201ENST00000437737 CDK15Q96Q40 435 aa12.7□□□□□ -0.38
LINC01088-201ENST00000437737 CCDC28BQ9BUN5 200 aa12.7□□□□□ -0.38
LINC01088-201ENST00000437737 KLHL4Q9C0H6 718 aa12.7□□□□□ -0.38
LINC01088-201ENST00000437737 NXF5Q9H1B4 397 aaKnown RBP12.7□□□□□ -0.38
LINC01088-201ENST00000437737 ELOVL6Q9H5J4 265 aa12.7□□□□□ -0.38
LINC01088-201ENST00000437737 RABEP2Q9H5N1 569 aa12.7□□□□□ -0.38
LINC01088-201ENST00000437737 MEAF6Q9HAF1 191 aa12.7□□□□□ -0.38
LINC01088-201ENST00000437737 CXorf21Q9HAI6 301 aa12.7□□□□□ -0.38
LINC01088-201ENST00000437737 NMRK1Q9NWW6 199 aa12.7□□□□□ -0.38
LINC01088-201ENST00000437737 DKKL1Q9UK85 242 aa12.7□□□□□ -0.38
LINC01088-201ENST00000437737 RNF11Q9Y3C5 154 aa12.7□□□□□ -0.38
LINC01088-201ENST00000437737 FIS1Q9Y3D6 152 aa12.7□□□□□ -0.38
LINC01088-201ENST00000437737 TSC22D4Q9Y3Q8 395 aa12.7□□□□□ -0.38
LINC01088-201ENST00000437737 DNAJC15Q9Y5T4 150 aa12.7□□□□□ -0.38
LINC01088-201ENST00000437737 A0A1W2PR48 441 aa12.69□□□□□ -0.38
LINC01088-201ENST00000437737 A0A1W2PS29 197 aa12.69□□□□□ -0.38
LINC01088-201ENST00000437737 PRAMEF25A6NGN4 478 aa12.69□□□□□ -0.38
LINC01088-201ENST00000437737 DCTN3O75935 186 aa12.69□□□□□ -0.38
LINC01088-201ENST00000437737 AIFM1O95831 613 aa12.69□□□□□ -0.38
LINC01088-201ENST00000437737 HSD3B1P14060 373 aa12.69□□□□□ -0.38
LINC01088-201ENST00000437737 NAGAP17050 411 aa12.69□□□□□ -0.38
LINC01088-201ENST00000437737 NT5EP21589 574 aa12.69□□□□□ -0.38
LINC01088-201ENST00000437737 GPX3P22352 226 aa12.69□□□□□ -0.38
LINC01088-201ENST00000437737 HSD3B2P26439 372 aa12.69□□□□□ -0.38
LINC01088-201ENST00000437737 PIK3R1P27986 724 aa12.69□□□□□ -0.38
LINC01088-201ENST00000437737 SRD5A2P31213 254 aa12.69□□□□□ -0.38
LINC01088-201ENST00000437737 RPS4XP62701 263 aaKnown RBP12.69□□□□□ -0.38
LINC01088-201ENST00000437737 PLCXD2Q0VAA5 305 aa12.69□□□□□ -0.38
LINC01088-201ENST00000437737 SNTA1Q13424 505 aa12.69□□□□□ -0.38
LINC01088-201ENST00000437737 PDCD2Q16342 344 aaPredicted RBP12.69□□□□□ -0.38
LINC01088-201ENST00000437737 CPSF6Q16630 551 aaKnown RBP eCLIP12.69□□□□□ -0.38
LINC01088-201ENST00000437737 FRG2Q64ET8 278 aa12.69□□□□□ -0.38
LINC01088-201ENST00000437737 OR52E8Q6IFG1 317 aa12.69□□□□□ -0.38
LINC01088-201ENST00000437737 CGB2Q6NT52 195 aa12.69□□□□□ -0.38
LINC01088-201ENST00000437737 TMEM81Q6P7N7 255 aa12.69□□□□□ -0.38
LINC01088-201ENST00000437737 C22orf34Q6ZV56 151 aa12.69□□□□□ -0.38
LINC01088-201ENST00000437737 DDIASQ8IXT1 998 aa12.69□□□□□ -0.38
LINC01088-201ENST00000437737 UBQLNLQ8IYU4 475 aa12.69□□□□□ -0.38
LINC01088-201ENST00000437737 ZNF611Q8N823 705 aa12.69□□□□□ -0.38
LINC01088-201ENST00000437737 GBP7Q8N8V2 638 aaPredicted RBP12.69□□□□□ -0.38
LINC01088-201ENST00000437737 WDSUB1Q8N9V3 476 aa12.69□□□□□ -0.38
LINC01088-201ENST00000437737 CEP70Q8NHQ1 597 aa12.69□□□□□ -0.38
LINC01088-201ENST00000437737 RFWD2Q8NHY2 731 aa12.69□□□□□ -0.38
LINC01088-201ENST00000437737 OMA1Q96E52 524 aa12.69□□□□□ -0.38
LINC01088-201ENST00000437737 DTNBP1Q96EV8 351 aa12.69□□□□□ -0.38
LINC01088-201ENST00000437737 FRG2BQ96QU4 278 aa12.69□□□□□ -0.38
LINC01088-201ENST00000437737 TMEM120AQ9BXJ8 343 aa12.69□□□□□ -0.38
LINC01088-201ENST00000437737 NUF2Q9BZD4 464 aa12.69□□□□□ -0.38
LINC01088-201ENST00000437737 EHD3Q9NZN3 535 aa12.69□□□□□ -0.38
LINC01088-201ENST00000437737 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.69□□□□□ -0.38
LINC01088-201ENST00000437737 HEY2Q9UBP5 337 aa12.69□□□□□ -0.38
LINC01088-201ENST00000437737 ZNF225Q9UK10 706 aa12.69□□□□□ -0.38
LINC01088-201ENST00000437737 LAMP3Q9UQV4 416 aa12.69□□□□□ -0.38
LINC01088-201ENST00000437737 TIMM22Q9Y584 194 aa12.69□□□□□ -0.38
LINC01088-201ENST00000437737 GOLGA8QA0A0J9YX86 632 aa12.68□□□□□ -0.38
LINC01088-201ENST00000437737 GOLGA8OA6NCC3 632 aa12.68□□□□□ -0.38
LINC01088-201ENST00000437737 GOLGA8NF8WBI6 632 aa12.68□□□□□ -0.38
LINC01088-201ENST00000437737 MANBAO00462 879 aa12.68□□□□□ -0.38
LINC01088-201ENST00000437737 ZNF195O14628 629 aa12.68□□□□□ -0.38
LINC01088-201ENST00000437737 HS3ST1O14792 307 aa12.68□□□□□ -0.38
LINC01088-201ENST00000437737 RGS14O43566 566 aa12.68□□□□□ -0.38
LINC01088-201ENST00000437737 TMPRSS11DO60235 418 aa12.68□□□□□ -0.38
LINC01088-201ENST00000437737 CCDC22O60826 627 aa12.68□□□□□ -0.38
LINC01088-201ENST00000437737 EEDO75530 441 aaKnown RBP12.68□□□□□ -0.38
LINC01088-201ENST00000437737 PLAUP00749 431 aa12.68□□□□□ -0.38
LINC01088-201ENST00000437737 FAM58BPP0C7Q3 252 aa12.68□□□□□ -0.38
LINC01088-201ENST00000437737 TBXA2RP21731 343 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms