RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 VCANP13611 3396 aa2.17□□□□□ -2.06
HMGB1P31-201ENST00000437242 A0A0A6YYD4 124 aa2.17□□□□□ -2.06
HMGB1P31-201ENST00000437242 NPIPA5A0A0B4J1W7 369 aa2.17□□□□□ -2.06
HMGB1P31-201ENST00000437242 CFAP73A6NFT4 308 aa2.17□□□□□ -2.06
HMGB1P31-201ENST00000437242 CCDC69A6NI79 296 aa2.17□□□□□ -2.06
HMGB1P31-201ENST00000437242 NPIPA5E9PKD4 350 aa2.17□□□□□ -2.06
HMGB1P31-201ENST00000437242 SH2D1BO14796 132 aa2.17□□□□□ -2.06
HMGB1P31-201ENST00000437242 DUSP11O75319 330 aaKnown RBP2.17□□□□□ -2.06
HMGB1P31-201ENST00000437242 REC8O95072 547 aa2.17□□□□□ -2.06
HMGB1P31-201ENST00000437242 SLC4A1P02730 911 aa2.17□□□□□ -2.06
HMGB1P31-201ENST00000437242 HCKP08631 526 aa2.17□□□□□ -2.06
HMGB1P31-201ENST00000437242 FCGR3AP08637 254 aa2.17□□□□□ -2.06
HMGB1P31-201ENST00000437242 HOXC4P09017 264 aaPredicted RBP2.17□□□□□ -2.06
HMGB1P31-201ENST00000437242 SNRPCP09234 159 aaKnown RBP2.17□□□□□ -2.06
HMGB1P31-201ENST00000437242 OR9G9P0C7N8 305 aa2.17□□□□□ -2.06
HMGB1P31-201ENST00000437242 UMPSP11172 480 aa2.17□□□□□ -2.06
HMGB1P31-201ENST00000437242 PPP2R1BP30154 601 aa2.17□□□□□ -2.06
HMGB1P31-201ENST00000437242 SFNP31947 248 aa2.17□□□□□ -2.06
HMGB1P31-201ENST00000437242 ID1P41134 155 aa2.17□□□□□ -2.06
HMGB1P31-201ENST00000437242 RGRP47804 291 aa2.17□□□□□ -2.06
HMGB1P31-201ENST00000437242 TKTL1P51854 596 aa2.17□□□□□ -2.06
HMGB1P31-201ENST00000437242 ZNF131P52739 623 aa2.17□□□□□ -2.06
HMGB1P31-201ENST00000437242 GSTO1P78417 241 aa2.17□□□□□ -2.06
HMGB1P31-201ENST00000437242 CCL14Q16627 93 aa2.17□□□□□ -2.06
HMGB1P31-201ENST00000437242 PCK2Q16822 640 aa2.17□□□□□ -2.06
HMGB1P31-201ENST00000437242 HKDC1Q2TB90 917 aa2.17□□□□□ -2.06
HMGB1P31-201ENST00000437242 ANKRD55Q3KP44 614 aa2.17□□□□□ -2.06
HMGB1P31-201ENST00000437242 TIMM50Q3ZCQ8 353 aa2.17□□□□□ -2.06
HMGB1P31-201ENST00000437242 CCDC40Q4G0X9 1142 aa2.17□□□□□ -2.06
HMGB1P31-201ENST00000437242 ZNF506Q5JVG8 444 aa2.17□□□□□ -2.06
HMGB1P31-201ENST00000437242 IL23RQ5VWK5 629 aa2.17□□□□□ -2.06
HMGB1P31-201ENST00000437242 WDR25Q64LD2 544 aaPredicted RBP2.17□□□□□ -2.06
HMGB1P31-201ENST00000437242 RAB12Q6IQ22 244 aa2.17□□□□□ -2.06
HMGB1P31-201ENST00000437242 STEAP1BQ6NZ63 245 aa2.17□□□□□ -2.06
HMGB1P31-201ENST00000437242 ARMCX5Q6P1M9 558 aa2.17□□□□□ -2.06
HMGB1P31-201ENST00000437242 EMBQ6PCB8 327 aa2.17□□□□□ -2.06
HMGB1P31-201ENST00000437242 C1orf186Q6ZWK4 172 aa2.17□□□□□ -2.06
HMGB1P31-201ENST00000437242 Q7L0L9 218 aa2.17□□□□□ -2.06
HMGB1P31-201ENST00000437242 YRDCQ86U90 279 aaKnown RBP2.17□□□□□ -2.06
HMGB1P31-201ENST00000437242 RANBP3LQ86VV4 465 aaPredicted RBP2.17□□□□□ -2.06
HMGB1P31-201ENST00000437242 ZNF619Q8N2I2 560 aa2.17□□□□□ -2.06
HMGB1P31-201ENST00000437242 KDM8Q8N371 416 aa2.17□□□□□ -2.06
HMGB1P31-201ENST00000437242 ZNRF1Q8ND25 227 aa2.17□□□□□ -2.06
HMGB1P31-201ENST00000437242 CCNYQ8ND76 341 aa2.17□□□□□ -2.06
HMGB1P31-201ENST00000437242 OR52E1Q8NGJ3 308 aa2.17□□□□□ -2.06
HMGB1P31-201ENST00000437242 DQX1Q8TE96 717 aaKnown RBP2.17□□□□□ -2.06
HMGB1P31-201ENST00000437242 TMEM45BQ96B21 275 aa2.17□□□□□ -2.06
HMGB1P31-201ENST00000437242 C14orf79Q96F83 325 aa2.17□□□□□ -2.06
HMGB1P31-201ENST00000437242 NSMCE2Q96MF7 247 aa2.17□□□□□ -2.06
HMGB1P31-201ENST00000437242 COQ7Q99807 217 aa2.17□□□□□ -2.06
HMGB1P31-201ENST00000437242 LIME1Q9H400 295 aa2.17□□□□□ -2.06
HMGB1P31-201ENST00000437242 SLC25A19Q9HC21 320 aa2.17□□□□□ -2.06
HMGB1P31-201ENST00000437242 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.17□□□□□ -2.06
HMGB1P31-201ENST00000437242 SENP1Q9P0U3 644 aa2.17□□□□□ -2.06
HMGB1P31-201ENST00000437242 EIF3KQ9UBQ5 218 aaKnown RBP2.17□□□□□ -2.06
HMGB1P31-201ENST00000437242 COPS7AQ9UBW8 275 aa2.17□□□□□ -2.06
HMGB1P31-201ENST00000437242 FETUBQ9UGM5 382 aa2.17□□□□□ -2.06
HMGB1P31-201ENST00000437242 CPQQ9Y646 472 aa2.17□□□□□ -2.06
HMGB1P31-201ENST00000437242 ROCK2O75116 1388 aaKnown RBP2.17□□□□□ -2.06
HMGB1P31-201ENST00000437242 FLT4P35916 1363 aa2.17□□□□□ -2.06
HMGB1P31-201ENST00000437242 NPC1L1Q9UHC9 1359 aa2.17□□□□□ -2.06
HMGB1P31-201ENST00000437242 PRUNE2Q8WUY3 3088 aa2.17□□□□□ -2.06
HMGB1P31-201ENST00000437242 LAMA3Q16787 3333 aa2.17□□□□□ -2.06
HMGB1P31-201ENST00000437242 SALL1Q9NSC2 1324 aa2.17□□□□□ -2.06
HMGB1P31-201ENST00000437242 MUC19Q7Z5P9 8384 aa2.16□□□□□ -2.06
HMGB1P31-201ENST00000437242 TONSLQ96HA7 1378 aa2.16□□□□□ -2.06
HMGB1P31-201ENST00000437242 CFLARO15519 480 aa2.16□□□□□ -2.06
HMGB1P31-201ENST00000437242 VENTXO95231 258 aa2.16□□□□□ -2.06
HMGB1P31-201ENST00000437242 CALCAP01258 141 aa2.16□□□□□ -2.06
HMGB1P31-201ENST00000437242 GSTA1P08263 222 aa2.16□□□□□ -2.06
HMGB1P31-201ENST00000437242 MAT2AP31153 395 aaKnown RBP2.16□□□□□ -2.06
HMGB1P31-201ENST00000437242 ASMTP46597 345 aa2.16□□□□□ -2.06
HMGB1P31-201ENST00000437242 NLRP11P59045 1033 aaKnown RBP2.16□□□□□ -2.06
HMGB1P31-201ENST00000437242 RPS4XP62701 263 aaKnown RBP2.16□□□□□ -2.06
HMGB1P31-201ENST00000437242 SNX1Q13596 522 aa2.16□□□□□ -2.06
HMGB1P31-201ENST00000437242 CARTPTQ16568 116 aa2.16□□□□□ -2.06
HMGB1P31-201ENST00000437242 ZSWIM7Q19AV6 140 aa2.16□□□□□ -2.06
HMGB1P31-201ENST00000437242 ACSF3Q4G176 576 aaPredicted RBP2.16□□□□□ -2.06
HMGB1P31-201ENST00000437242 PARP10Q53GL7 1025 aa2.16□□□□□ -2.06
HMGB1P31-201ENST00000437242 UNC50Q53HI1 259 aa2.16□□□□□ -2.06
HMGB1P31-201ENST00000437242 TOR1AIP1Q5JTV8 583 aa2.16□□□□□ -2.06
HMGB1P31-201ENST00000437242 CNSTQ6PJW8 725 aa2.16□□□□□ -2.06
HMGB1P31-201ENST00000437242 ABRAXAS1Q6UWZ7 409 aa2.16□□□□□ -2.06
HMGB1P31-201ENST00000437242 MFSD7Q6UXD7 560 aa2.16□□□□□ -2.06
HMGB1P31-201ENST00000437242 STOX1Q6ZVD7 989 aa2.16□□□□□ -2.06
HMGB1P31-201ENST00000437242 BNIPLQ7Z465 357 aa2.16□□□□□ -2.06
HMGB1P31-201ENST00000437242 VPS36Q86VN1 386 aa2.16□□□□□ -2.06
HMGB1P31-201ENST00000437242 CCDC71Q8IV32 467 aaPredicted RBP2.16□□□□□ -2.06
HMGB1P31-201ENST00000437242 ARL14Q8N4G2 192 aa2.16□□□□□ -2.06
HMGB1P31-201ENST00000437242 LRRC17Q8N6Y2 441 aa2.16□□□□□ -2.06
HMGB1P31-201ENST00000437242 MLKLQ8NB16 471 aa2.16□□□□□ -2.06
HMGB1P31-201ENST00000437242 NEK11Q8NG66 645 aa2.16□□□□□ -2.06
HMGB1P31-201ENST00000437242 TMEM37Q8WXS4 190 aa2.16□□□□□ -2.06
HMGB1P31-201ENST00000437242 NTNG2Q96CW9 530 aa2.16□□□□□ -2.06
HMGB1P31-201ENST00000437242 RBM18Q96H35 190 aaKnown RBP2.16□□□□□ -2.06
HMGB1P31-201ENST00000437242 SPATA13Q96N96 652 aa2.16□□□□□ -2.06
HMGB1P31-201ENST00000437242 TMEM237Q96Q45 408 aa2.16□□□□□ -2.06
HMGB1P31-201ENST00000437242 ACCSQ96QU6 501 aa2.16□□□□□ -2.06
HMGB1P31-201ENST00000437242 TESK2Q96S53 571 aa2.16□□□□□ -2.06
HMGB1P31-201ENST00000437242 CPXM1Q96SM3 734 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms