RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 M0QZ24 198 aa10.6□□□□□ -0.71
SCN4A-201ENST00000435607 AIPO00170 330 aa10.6□□□□□ -0.71
SCN4A-201ENST00000435607 GMDSO60547 372 aa10.6□□□□□ -0.71
SCN4A-201ENST00000435607 UNGP13051 313 aaPredicted RBP10.6□□□□□ -0.71
SCN4A-201ENST00000435607 CD97P48960 835 aa10.6□□□□□ -0.71
SCN4A-201ENST00000435607 IL10RAQ13651 578 aa10.6□□□□□ -0.71
SCN4A-201ENST00000435607 OR7A5Q15622 319 aa10.6□□□□□ -0.71
SCN4A-201ENST00000435607 CLVS2Q5SYC1 327 aa10.6□□□□□ -0.71
SCN4A-201ENST00000435607 ZNF529Q6P280 563 aa10.6□□□□□ -0.71
SCN4A-201ENST00000435607 ZNF765Q7L2R6 523 aa10.6□□□□□ -0.71
SCN4A-201ENST00000435607 PHC2Q8IXK0 858 aa10.6□□□□□ -0.71
SCN4A-201ENST00000435607 EDAQ92838 391 aa10.6□□□□□ -0.71
SCN4A-201ENST00000435607 TOMM40LQ969M1 308 aa10.6□□□□□ -0.71
SCN4A-201ENST00000435607 NXPE3Q969Y0 559 aa10.6□□□□□ -0.71
SCN4A-201ENST00000435607 F6UZH7 168 aa10.6□□□□□ -0.71
SCN4A-201ENST00000435607 CASC3O15234 703 aaKnown RBP10.6□□□□□ -0.71
SCN4A-201ENST00000435607 NDUFB2O95178 105 aa10.6□□□□□ -0.71
SCN4A-201ENST00000435607 SNTB2Q13425 540 aaKnown RBP10.6□□□□□ -0.71
SCN4A-201ENST00000435607 KCNJ8Q15842 424 aa10.6□□□□□ -0.71
SCN4A-201ENST00000435607 FAM83FQ8NEG4 500 aaPredicted RBP10.6□□□□□ -0.71
SCN4A-201ENST00000435607 OR8J1Q8NGP2 316 aa10.6□□□□□ -0.71
SCN4A-201ENST00000435607 OR1J4Q8NGS1 313 aa10.6□□□□□ -0.71
SCN4A-201ENST00000435607 SCAMP4Q969E2 229 aa10.6□□□□□ -0.71
SCN4A-201ENST00000435607 BIRC7Q96CA5 298 aa10.6□□□□□ -0.71
SCN4A-201ENST00000435607 HRASLSQ9HDD0 168 aa10.6□□□□□ -0.71
SCN4A-201ENST00000435607 HSPB11Q9Y547 144 aa10.6□□□□□ -0.71
SCN4A-201ENST00000435607 GLCEO94923 617 aa10.59□□□□□ -0.71
SCN4A-201ENST00000435607 IGHG1P01857 330 aa10.59□□□□□ -0.71
SCN4A-201ENST00000435607 TK1P04183 234 aa10.59□□□□□ -0.71
SCN4A-201ENST00000435607 SDHBP21912 280 aa10.59□□□□□ -0.71
SCN4A-201ENST00000435607 GATMP50440 423 aa10.59□□□□□ -0.71
SCN4A-201ENST00000435607 ACSBG2Q5FVE4 666 aa10.59□□□□□ -0.71
SCN4A-201ENST00000435607 TMEM150AQ86TG1 271 aa10.59□□□□□ -0.71
SCN4A-201ENST00000435607 ZNF687Q8N1G0 1237 aa10.59□□□□□ -0.71
SCN4A-201ENST00000435607 EID2Q8N6I1 236 aa10.59□□□□□ -0.71
SCN4A-201ENST00000435607 MSANTD3Q96H12 275 aa10.59□□□□□ -0.71
SCN4A-201ENST00000435607 NXT1Q9UKK6 140 aaKnown RBP10.59□□□□□ -0.71
SCN4A-201ENST00000435607 POLHQ9Y253 713 aa10.59□□□□□ -0.71
SCN4A-201ENST00000435607 H3BQ06 376 aaPredicted RBP10.59□□□□□ -0.71
SCN4A-201ENST00000435607 KNG1P01042 644 aa10.59□□□□□ -0.71
SCN4A-201ENST00000435607 CA3P07451 260 aa10.59□□□□□ -0.71
SCN4A-201ENST00000435607 BPIP17213 487 aa10.59□□□□□ -0.71
SCN4A-201ENST00000435607 FOXN2P32314 431 aa10.59□□□□□ -0.71
SCN4A-201ENST00000435607 DCAF7P61962 342 aa10.59□□□□□ -0.71
SCN4A-201ENST00000435607 KLBQ86Z14 1044 aa10.59□□□□□ -0.71
SCN4A-201ENST00000435607 IL17RDQ8NFM7 739 aa10.59□□□□□ -0.71
SCN4A-201ENST00000435607 OR14J1Q9UGF5 321 aa10.59□□□□□ -0.71
SCN4A-201ENST00000435607 ZDHHC2Q9UIJ5 367 aa10.59□□□□□ -0.71
SCN4A-201ENST00000435607 VDAC3Q9Y277 283 aa10.59□□□□□ -0.71
SCN4A-201ENST00000435607 MRPS2Q9Y399 296 aaKnown RBP10.59□□□□□ -0.71
SCN4A-201ENST00000435607 TEX51A0A1B0GUA7 166 aa10.59□□□□□ -0.71
SCN4A-201ENST00000435607 INCA1Q0VD86 236 aa10.59□□□□□ -0.71
SCN4A-201ENST00000435607 LIPKQ5VXJ0 399 aa10.59□□□□□ -0.71
SCN4A-201ENST00000435607 TSPAN33Q86UF1 283 aa10.59□□□□□ -0.71
SCN4A-201ENST00000435607 NAA40Q86UY6 237 aa10.59□□□□□ -0.71
SCN4A-201ENST00000435607 NAT8LQ8N9F0 302 aa10.59□□□□□ -0.71
SCN4A-201ENST00000435607 ZFAND1Q8TCF1 268 aa10.59□□□□□ -0.71
SCN4A-201ENST00000435607 TOE1Q96GM8 510 aaKnown RBP10.59□□□□□ -0.71
SCN4A-201ENST00000435607 ZNF587Q96SQ5 575 aaPredicted RBP10.59□□□□□ -0.71
SCN4A-201ENST00000435607 APOOQ9BUR5 198 aa10.59□□□□□ -0.71
SCN4A-201ENST00000435607 TMEM59Q9BXS4 323 aa10.59□□□□□ -0.71
SCN4A-201ENST00000435607 PREBQ9HCU5 417 aa10.59□□□□□ -0.71
SCN4A-201ENST00000435607 MYH9P35579 1960 aaKnown RBP10.59□□□□□ -0.71
SCN4A-201ENST00000435607 A0A1W2PPK0 400 aa10.59□□□□□ -0.71
SCN4A-201ENST00000435607 RGS11O94810 467 aa10.59□□□□□ -0.71
SCN4A-201ENST00000435607 RAC1P63000 192 aa10.59□□□□□ -0.71
SCN4A-201ENST00000435607 MRPS21P82921 87 aaKnown RBP10.59□□□□□ -0.71
SCN4A-201ENST00000435607 SLC36A2Q495M3 483 aa10.59□□□□□ -0.71
SCN4A-201ENST00000435607 FAM74A1Q5RGS3 127 aa10.59□□□□□ -0.71
SCN4A-201ENST00000435607 H1FXQ92522 213 aaKnown RBP10.59□□□□□ -0.71
SCN4A-201ENST00000435607 ZUFSPQ96AP4 578 aa10.59□□□□□ -0.71
SCN4A-201ENST00000435607 CIDECQ96AQ7 238 aaPredicted RBP10.59□□□□□ -0.71
SCN4A-201ENST00000435607 SLC41A3Q96GZ6 507 aa10.59□□□□□ -0.71
SCN4A-201ENST00000435607 C17orf112F2Z3M2 114 aa10.59□□□□□ -0.71
SCN4A-201ENST00000435607 PRRG2O14669 202 aa10.59□□□□□ -0.71
SCN4A-201ENST00000435607 BCAT2O15382 392 aaPredicted RBP10.59□□□□□ -0.71
SCN4A-201ENST00000435607 CNIH1O95406 144 aa10.59□□□□□ -0.71
SCN4A-201ENST00000435607 CTSAP10619 480 aa10.59□□□□□ -0.71
SCN4A-201ENST00000435607 CHRNB2P17787 502 aa10.59□□□□□ -0.71
SCN4A-201ENST00000435607 MAOAP21397 527 aa10.59□□□□□ -0.71
SCN4A-201ENST00000435607 IDUAP35475 653 aa10.59□□□□□ -0.71
SCN4A-201ENST00000435607 GPR4P46093 362 aa10.59□□□□□ -0.71
SCN4A-201ENST00000435607 AGTR2P50052 363 aa10.59□□□□□ -0.71
SCN4A-201ENST00000435607 MYBPHQ13203 477 aa10.59□□□□□ -0.71
SCN4A-201ENST00000435607 MICAQ29983 383 aa10.59□□□□□ -0.71
SCN4A-201ENST00000435607 ZNF678Q5SXM1 525 aa10.59□□□□□ -0.71
SCN4A-201ENST00000435607 CNTN4Q8IWV2 1026 aa10.59□□□□□ -0.71
SCN4A-201ENST00000435607 NANPQ8TBE9 248 aa10.59□□□□□ -0.71
SCN4A-201ENST00000435607 SAP130Q9H0E3 1048 aa10.59□□□□□ -0.71
SCN4A-201ENST00000435607 RNF39Q9H2S5 420 aa10.59□□□□□ -0.71
SCN4A-201ENST00000435607 ELOVL3Q9HB03 270 aa10.59□□□□□ -0.71
SCN4A-201ENST00000435607 FAM159BA6NKW6 160 aa10.59□□□□□ -0.71
SCN4A-201ENST00000435607 NUDT21O43809 227 aaKnown RBP10.59□□□□□ -0.71
SCN4A-201ENST00000435607 RFPL1O75677 317 aa10.59□□□□□ -0.71
SCN4A-201ENST00000435607 MPIG6BO95866 241 aa10.59□□□□□ -0.71
SCN4A-201ENST00000435607 ADH4P08319 380 aa10.59□□□□□ -0.71
SCN4A-201ENST00000435607 CKMT1AP12532 417 aa10.59□□□□□ -0.71
SCN4A-201ENST00000435607 HOXA1P49639 335 aaPredicted RBP10.59□□□□□ -0.71
SCN4A-201ENST00000435607 SFRP5Q5T4F7 317 aa10.59□□□□□ -0.71
SCN4A-201ENST00000435607 ACBD4Q8NC06 268 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms