RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 BPTFQ12830 3046 aa7.56□□□□□ -1.2
VTI1A-202ENST00000432306 TRAV34A0A0B4J273 112 aa7.56□□□□□ -1.2
VTI1A-202ENST00000432306 A0A0U1RQF3 1178 aa7.56□□□□□ -1.2
VTI1A-202ENST00000432306 XKRY2A2RUG3 117 aa7.56□□□□□ -1.2
VTI1A-202ENST00000432306 GABRR3A8MPY1 467 aa7.56□□□□□ -1.2
VTI1A-202ENST00000432306 INMT-MINDY4F8WBC2 141 aa7.56□□□□□ -1.2
VTI1A-202ENST00000432306 LINC01565O15544 149 aa7.56□□□□□ -1.2
VTI1A-202ENST00000432306 AKR7A2O43488 359 aa7.56□□□□□ -1.2
VTI1A-202ENST00000432306 CHP2O43745 196 aa7.56□□□□□ -1.2
VTI1A-202ENST00000432306 PRKYO43930 277 aa7.56□□□□□ -1.2
VTI1A-202ENST00000432306 RAF1P04049 648 aa7.56□□□□□ -1.2
VTI1A-202ENST00000432306 SNRPBP14678 240 aaKnown RBP7.56□□□□□ -1.2
VTI1A-202ENST00000432306 LHCGRP22888 699 aa7.56□□□□□ -1.2
VTI1A-202ENST00000432306 IL32P24001 234 aa7.56□□□□□ -1.2
VTI1A-202ENST00000432306 CAPZA2P47755 286 aa7.56□□□□□ -1.2
VTI1A-202ENST00000432306 MAP2K6P52564 334 aa7.56□□□□□ -1.2
VTI1A-202ENST00000432306 WNT4P56705 351 aa7.56□□□□□ -1.2
VTI1A-202ENST00000432306 AP1S1P61966 158 aa7.56□□□□□ -1.2
VTI1A-202ENST00000432306 TRA2BP62995 288 aaKnown RBP7.56□□□□□ -1.2
VTI1A-202ENST00000432306 MGAT3Q09327 533 aa7.56□□□□□ -1.2
VTI1A-202ENST00000432306 SMARCB1Q12824 385 aa7.56□□□□□ -1.2
VTI1A-202ENST00000432306 ARHGEF7Q14155 803 aa7.56□□□□□ -1.2
VTI1A-202ENST00000432306 PLA1AQ53H76 456 aa7.56□□□□□ -1.2
VTI1A-202ENST00000432306 CCDC157Q569K6 752 aa7.56□□□□□ -1.2
VTI1A-202ENST00000432306 PYDC2Q56P42 97 aa7.56□□□□□ -1.2
VTI1A-202ENST00000432306 WIPI1Q5MNZ9 446 aaPredicted RBP7.56□□□□□ -1.2
VTI1A-202ENST00000432306 GCNT6Q5T4J0 391 aa7.56□□□□□ -1.2
VTI1A-202ENST00000432306 CPTPQ5TA50 214 aa7.56□□□□□ -1.2
VTI1A-202ENST00000432306 ASCL5Q7RTU5 278 aa7.56□□□□□ -1.2
VTI1A-202ENST00000432306 Q8N402 240 aa7.56□□□□□ -1.2
VTI1A-202ENST00000432306 POGLUT1Q8NBL1 392 aa7.56□□□□□ -1.2
VTI1A-202ENST00000432306 AQP11Q8NBQ7 271 aa7.56□□□□□ -1.2
VTI1A-202ENST00000432306 LRRC20Q8TCA0 184 aa7.56□□□□□ -1.2
VTI1A-202ENST00000432306 METTL21AQ8WXB1 218 aa7.56□□□□□ -1.2
VTI1A-202ENST00000432306 ASB11Q8WXH4 323 aa7.56□□□□□ -1.2
VTI1A-202ENST00000432306 FAM83CQ9BQN1 747 aa7.56□□□□□ -1.2
VTI1A-202ENST00000432306 BOCQ9BWV1 1114 aa7.56□□□□□ -1.2
VTI1A-202ENST00000432306 BEX2Q9BXY8 128 aa7.56□□□□□ -1.2
VTI1A-202ENST00000432306 QRSL1Q9H0R6 528 aaKnown RBP7.56□□□□□ -1.2
VTI1A-202ENST00000432306 BPIFA1Q9NP55 256 aa7.56□□□□□ -1.2
VTI1A-202ENST00000432306 IL26Q9NPH9 171 aa7.56□□□□□ -1.2
VTI1A-202ENST00000432306 MED9Q9NWA0 146 aa7.56□□□□□ -1.2
VTI1A-202ENST00000432306 MCUBQ9NWR8 336 aa7.56□□□□□ -1.2
VTI1A-202ENST00000432306 CBLCQ9ULV8 474 aa7.56□□□□□ -1.2
VTI1A-202ENST00000432306 GSTK1Q9Y2Q3 226 aa7.56□□□□□ -1.2
VTI1A-202ENST00000432306 HSPB11Q9Y547 144 aa7.56□□□□□ -1.2
VTI1A-202ENST00000432306 PCDHGC4Q9Y5F7 938 aa7.56□□□□□ -1.2
VTI1A-202ENST00000432306 ZNF106Q9H2Y7 1883 aaKnown RBP7.56□□□□□ -1.2
VTI1A-202ENST00000432306 TPRP12270 2363 aaKnown RBP7.56□□□□□ -1.2
VTI1A-202ENST00000432306 C5orf42Q9H799 3197 aa7.56□□□□□ -1.2
VTI1A-202ENST00000432306 PLXNA4Q9HCM2 1894 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 CXorf51AA0A1B0GTR3 108 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 FAM240BA0A1B0GVZ2 78 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 PIPSLA2A3N6 862 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 DCDC2BA2VCK2 349 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 SNTNA6NMZ2 147 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 HEPACAM2A8MVW5 462 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 M0QZ92 97 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 FAAHO00519 579 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 TO15178 435 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 CASC3O15234 703 aaKnown RBP7.55□□□□□ -1.2
VTI1A-202ENST00000432306 SLC19A2O60779 497 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 OR7A10O76100 309 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 LRATO95237 230 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 RAB36O95755 333 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 SOD1P00441 154 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 TRBC1P01850 177 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 CSF2P04141 144 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 RRASP10301 218 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 SLC6A4P31645 630 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 RPL3P39023 403 aaKnown RBP7.55□□□□□ -1.2
VTI1A-202ENST00000432306 CSNK1DP48730 415 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 PNLIPRP1P54315 467 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 RAE1P78406 368 aaKnown RBP7.55□□□□□ -1.2
VTI1A-202ENST00000432306 SEMG2Q02383 582 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 RAB40BQ12829 278 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 NDUFA9Q16795 377 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 PTCHD3Q3KNS1 767 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 KLHL22Q53GT1 634 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 SPIN4Q56A73 249 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 CD276Q5ZPR3 534 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 GRHL2Q6ISB3 625 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 TRIM40Q6P9F5 258 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 ZCCHC12Q6PEW1 402 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 LINC00696Q6ZRV3 163 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 SLC34A3Q8N130 599 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 ARHGEF39Q8N4T4 335 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 LINC00471Q8N535 108 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 ARIH2OSQ8N7S6 290 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 ACOT12Q8WYK0 555 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 LPPQ93052 612 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 FBXO32Q969P5 355 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 MTERF3Q96E29 417 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 ART5Q96L15 291 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 SMIM14Q96QK8 99 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 JAM3Q9BX67 310 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 ASB8Q9H765 288 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 RC3H2Q9HBD1 1191 aaKnown RBP7.55□□□□□ -1.2
VTI1A-202ENST00000432306 ZFP64Q9NPA5 681 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 ARL15Q9NXU5 204 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms